mRNA_P-canaliculata_contig99288.24042.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: UPI001D2541A4 (nitric oxide synthase oxygenase n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001D2541A4) HSP 1 Score: 142 bits (359), Expect = 4.150e-37 Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALVQRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 + GAVAFLCGPQ YM AVRSHL+ GWA+ AI QELFSSKLDE+GNAE +R A++VAGGI IES F+VQPVG+VAKEA+ YLKQCY+ERGLPEV Sbjct: 724 YKEGAVAFLCGPQVYMDAVRSHLLEAGWADDAIRQELFSSKLDEEGNAEP-PKRAAVQVAGGIKGIESYSFDVQPVGEVAKEAEAYLKQCYVERGLPEV 821
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: K9VZW9_9CYAN (Nitric oxide synthase NOS n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9VZW9_9CYAN) HSP 1 Score: 124 bits (311), Expect = 1.230e-30 Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALV-QRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 + G VAF+CGPQP+M AVR +L GW + AI QELFSSKL+EDGNA+ + QRPA+++AGGI IE VQP+ VAKEA+ +LKQCYLE+GL EV Sbjct: 750 YTEGTVAFMCGPQPFMDAVRGYLQTAGWQDHAIRQELFSSKLNEDGNAQTPISQRPAVQLAGGITPIEQTSIYVQPINSVAKEAEVFLKQCYLEQGLAEV 849
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: A0A328IAN2_9CYAN (Nitric oxide synthase NOS (Fragment) n=1 Tax=Hapalosiphonaceae cyanobacterium JJU2 TaxID=2109628 RepID=A0A328IAN2_9CYAN) HSP 1 Score: 119 bits (297), Expect = 9.490e-29 Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALV-QRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 + G VAF+CGPQ YM AVR +L GW AI +ELFSSKLD+DGNA+ +V +RPA+++AGGI +E D F V VG V +EA+ +LKQCYLE+GL EV Sbjct: 742 YTEGTVAFICGPQAYMDAVRGYLKQAGWPNVAIREELFSSKLDDDGNAQRVVPKRPAVQLAGGITPVEHDSFNVGAVGSVMEEAEVFLKQCYLEQGLNEV 841
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: A0A1Z4GX41_9CYAN (FHA domain containing protein n=2 Tax=Nostocales TaxID=1161 RepID=A0A1Z4GX41_9CYAN) HSP 1 Score: 116 bits (291), Expect = 6.120e-28 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 70 VAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAE-ALVQRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 VAF+CGP+P+M VRS+L GW + AI QELFSSKL+E+GN + A+ QRPA+++AGGI IE VQP+ VA+EA+ +LKQCYLE+GL EV Sbjct: 763 VAFMCGPEPFMDGVRSYLKTAGWPDCAIRQELFSSKLNEEGNVQTAIPQRPAVQLAGGITPIEQMSIYVQPINSVAQEAEVFLKQCYLEQGLAEV 857
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: A0A352AP46_9CYAN (Nitric oxide synthase NOS n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AP46_9CYAN) HSP 1 Score: 116 bits (290), Expect = 7.710e-28 Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALV-QRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 +N GAV+FLCGPQ +M AVR +L W AI +ELFSSKLDE+G A+ V QR A+++AGGI +E V+PVG V KEA+ +LKQCYLE+GLPEV Sbjct: 245 YNDGAVSFLCGPQAFMDAVRDYLQVARWPTHAIREELFSSKLDEEGKAQTPVAQRAAVQLAGGITPVEQYSIYVEPVGSVMKEAEAFLKQCYLEQGLPEV 344
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: A0A1Z4S275_9NOSO (FHA domain containing protein n=2 Tax=Nostoc sp. NIES-4103 TaxID=2005458 RepID=A0A1Z4S275_9NOSO) HSP 1 Score: 116 bits (290), Expect = 8.350e-28 Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALV-QRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 + G+VAF+CGP+P+M VR +L GW + AI QELFSSKL+E+G A+ V QRPA+++AGGI IE VQP+ VA+EA+ +LKQCYLE+GL EV Sbjct: 757 YTEGSVAFMCGPEPFMDGVRGYLQTAGWPDHAIRQELFSSKLNEEGKAQTPVPQRPAVQLAGGITPIEQISIYVQPINSVAQEAEVFLKQCYLEQGLAEV 856
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: UPI0004AD3C49 (nitric oxide synthase oxygenase n=2 Tax=Nostocales TaxID=1161 RepID=UPI0004AD3C49) HSP 1 Score: 114 bits (286), Expect = 2.890e-27 Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 64 GAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALVQRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 G VAF+CGPQP+M A+R +L GW ++AI QELFSSKLDE+G A+A V R AI++AGGI IE D V+P+ V +EA+ +LKQCYLE+GL +V Sbjct: 760 GTVAFMCGPQPFMDAMRDYLQQAGWQDTAIRQELFSSKLDEEGKAKAPV-RQAIQLAGGITPIEQDSIYVEPIASVMQEAEVFLKQCYLEQGLAQV 854
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: K9WNF9_9CYAN (Nitric oxide synthase, oxygenase domain protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9WNF9_9CYAN) HSP 1 Score: 114 bits (285), Expect = 3.940e-27 Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEA-LVQRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 + GAVAF+CGP+ YM A+R HL W SAI +ELFSSKLDE+G A+ +++R A+++AGGI +E F+V PVG V +EA+ +LKQCYLE+GL V Sbjct: 739 YTEGAVAFMCGPESYMKAIRGHLKEANWPNSAIREELFSSKLDEEGKAQKPVIKRTAVQLAGGITPVEHHSFDVGPVGSVVQEAEAFLKQCYLEQGLNAV 838
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: A0A844MCK4_9CYAN (Nitric oxide synthase NOS n=2 Tax=Scytonema sp. UIC 10036 TaxID=2304196 RepID=A0A844MCK4_9CYAN) HSP 1 Score: 112 bits (280), Expect = 1.840e-26 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 1 AVRSRKRASSDLSARTAHFNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALVQRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 A RS R +++ R + + VAF+CGPQP+M A+R +L GW +SAI QELFSSKLDE+G +A V R I++AGGI IE V+PV V +EA+ +LKQCYLE+GL EV Sbjct: 503 ATRSGNRLNAEAVQRLYPYTNNTVAFMCGPQPFMDAMRDYLQQAGWQDSAIRQELFSSKLDEEGKVKAPV-RQVIQLAGGITPIEQYSIYVEPVASVMQEAEVFLKQCYLEQGLAEV 618
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Match: A0A1Z4QI29_9NOST (FHA domain containing protein n=1 Tax=Cylindrospermum sp. NIES-4074 TaxID=2005457 RepID=A0A1Z4QI29_9NOST) HSP 1 Score: 112 bits (279), Expect = 2.540e-26 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 55 FNSGAVAFLCGPQPYMSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALVQRPAIKVAGGI*SIESDRFEVQPVGDVAKEAQTYLKQCYLERGLPEV 351 ++ G VAF+CGPQP+M A+R +L W +SAI QELFSSKLDE+G A+ V R I++AGGI IE D V+P+ V +EA+ +LKQCYLE+GL EV Sbjct: 748 YSDGTVAFMCGPQPFMDAMRDYLQQASWQDSAIRQELFSSKLDEEGKAKTPV-RQIIQLAGGITPIEQDSIYVEPIASVMQEAEVFLKQCYLEQGLGEV 845 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99288.24042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99288.24042.1 >prot_P-canaliculata_contig99288.24042.1 ID=prot_P-canaliculata_contig99288.24042.1|Name=mRNA_P-canaliculata_contig99288.24042.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=49bp MSAVRSHLIAIGWAESAIHQELFSSKLDEDGNAEALVQRPAIKVAGGI*back to top mRNA from alignment at P-canaliculata_contig99288:514..864- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig99288.24042.1 ID=mRNA_P-canaliculata_contig99288.24042.1|Name=mRNA_P-canaliculata_contig99288.24042.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=351bp|location=Sequence derived from alignment at P-canaliculata_contig99288:514..864- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99288:514..864- >mRNA_P-canaliculata_contig99288.24042.1 ID=mRNA_P-canaliculata_contig99288.24042.1|Name=mRNA_P-canaliculata_contig99288.24042.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at P-canaliculata_contig99288:514..864- (Pelvetia canaliculata dioecious)back to top |