Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 906 |
| Cds size | 906 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817353.280789-CDS-P-canaliculata_contig99222:122..1028 | 1622817353.280789-CDS-P-canaliculata_contig99222:122..1028 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99222 123..1028 - |
| 1693495242.1667783-CDS-P-canaliculata_contig99222:122..1028 | 1693495242.1667783-CDS-P-canaliculata_contig99222:122..1028 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99222 123..1028 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99222.24040.1 >prot_P-canaliculata_contig99222.24040.1 ID=prot_P-canaliculata_contig99222.24040.1|Name=mRNA_P-canaliculata_contig99222.24040.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=302bp
LLLFDTCEAESIRSELKSIPNPDLTAIFAASKAENAWNLSTDQGTQFAFA
TSSVLARERFLETSWDAVDLCIQVKAEIEKDISTPHQTVTRFVRGAPVEI
ESSEIVSQKTRKSRSFARLILRVAITGFILATVCFSLLTYWRSHVFLFVD
LGEFTTLTNDPELVVYGMHPESNSLIQIKRQRIDGHTSSWMFLPASNLVI
DLDGKFNDAHPRELRFHRTFQPGFDTIKTFRLSLPPTAEILENVGMAFIS
AETWQHGEGKVRGDEVPAFWIDIKQLTIRQYLPLLLRALEKKRIQPHESV
LL back to topmRNA from alignment at P-canaliculata_contig99222:123..1028- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99222.24040.1 ID=mRNA_P-canaliculata_contig99222.24040.1|Name=mRNA_P-canaliculata_contig99222.24040.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=906bp|location=Sequence derived from alignment at P-canaliculata_contig99222:123..1028- (Pelvetia canaliculata dioecious)
CTGCTCCTTTTCGATACTTGCGAGGCGGAGTCAATTCGCAGCGAACTAAA
GTCGATCCCAAATCCAGACCTAACAGCAATTTTCGCAGCTTCGAAAGCTG
AGAATGCTTGGAATTTATCAACTGACCAAGGCACTCAATTTGCGTTTGCT
ACGTCCAGCGTATTGGCGAGAGAACGATTTCTTGAAACATCCTGGGATGC
CGTTGACCTGTGTATTCAGGTGAAGGCTGAGATAGAGAAAGATATCTCAA
CACCACACCAAACTGTCACTCGCTTTGTGCGAGGAGCGCCAGTTGAAATT
GAATCATCCGAAATAGTTTCGCAAAAAACAAGAAAGTCACGCTCTTTTGC
CCGCTTGATACTGCGAGTCGCAATTACCGGATTCATATTGGCGACTGTTT
GCTTTTCCCTGTTGACCTACTGGCGTAGTCACGTGTTCCTCTTTGTTGAC
TTAGGCGAATTCACAACGCTCACAAATGATCCCGAGTTAGTAGTCTACGG
GATGCATCCTGAATCAAATTCATTGATTCAAATCAAACGGCAACGCATAG
ATGGTCATACCTCTTCTTGGATGTTTTTACCCGCAAGCAACTTGGTGATT
GACCTAGATGGAAAATTCAATGATGCGCATCCAAGAGAGCTTCGGTTTCA
CCGAACTTTCCAGCCGGGATTCGATACAATAAAGACCTTTAGGCTATCTT
TACCTCCCACCGCAGAGATACTTGAAAATGTCGGAATGGCATTTATCTCT
GCGGAAACCTGGCAGCACGGTGAGGGCAAGGTGCGCGGTGATGAGGTCCC
TGCATTCTGGATAGATATCAAGCAGCTTACGATTCGTCAGTATCTGCCCT
TGCTTTTACGTGCTCTTGAAAAAAAACGAATTCAACCTCACGAGTCCGTC
CTTCTT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99222:123..1028- >mRNA_P-canaliculata_contig99222.24040.1 ID=mRNA_P-canaliculata_contig99222.24040.1|Name=mRNA_P-canaliculata_contig99222.24040.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1812bp|location=Sequence derived from alignment at P-canaliculata_contig99222:123..1028- (Pelvetia canaliculata dioecious)
CTGCTCCTTTTCGATACTTGCGAGGCGGAGTCAATTCGCAGCGAACTAAA
GTCGATCCCAAATCCAGACCTAACAGCAATTTTCGCAGCTTCGAAAGCTG
AGAATGCTTGGAATTTATCAACTGACCAAGGCACTCAATTTGCGTTTGCT
ACGTCCAGCGTATTGGCGAGAGAACGATTTCTTGAAACATCCTGGGATGC
CGTTGACCTGTGTATTCAGGTGAAGGCTGAGATAGAGAAAGATATCTCAA
CACCACACCAAACTGTCACTCGCTTTGTGCGAGGAGCGCCAGTTGAAATT
GAATCATCCGAAATAGTTTCGCAAAAAACAAGAAAGTCACGCTCTTTTGC
CCGCTTGATACTGCGAGTCGCAATTACCGGATTCATATTGGCGACTGTTT
GCTTTTCCCTGTTGACCTACTGGCGTAGTCACGTGTTCCTCTTTGTTGAC
TTAGGCGAATTCACAACGCTCACAAATGATCCCGAGTTAGTAGTCTACGG
GATGCATCCTGAATCAAATTCATTGATTCAAATCAAACGGCAACGCATAG
ATGGTCATACCTCTTCTTGGATGTTTTTACCCGCAAGCAACTTGGTGATT
GACCTAGATGGAAAATTCAATGATGCGCATCCAAGAGAGCTTCGGTTTCA
CCGAACTTTCCAGCCGGGATTCGATACAATAAAGACCTTTAGGCTATCTT
TACCTCCCACCGCAGAGATACTTGAAAATGTCGGAATGGCATTTATCTCT
GCGGAAACCTGGCAGCACGGTGAGGGCAAGGTGCGCGGTGATGAGGTCCC
TGCATTCTGGATAGATATCAAGCAGCTTACGATTCGTCAGTATCTGCCCT
TGCTTTTACGTGCTCTTGAAAAAAAACGAATTCAACCTCACGAGTCCGTC
CTTCTTCTGCTCCTTTTCGATACTTGCGAGGCGGAGTCAATTCGCAGCGA
ACTAAAGTCGATCCCAAATCCAGACCTAACAGCAATTTTCGCAGCTTCGA
AAGCTGAGAATGCTTGGAATTTATCAACTGACCAAGGCACTCAATTTGCG
TTTGCTACGTCCAGCGTATTGGCGAGAGAACGATTTCTTGAAACATCCTG
GGATGCCGTTGACCTGTGTATTCAGGTGAAGGCTGAGATAGAGAAAGATA
TCTCAACACCACACCAAACTGTCACTCGCTTTGTGCGAGGAGCGCCAGTT
GAAATTGAATCATCCGAAATAGTTTCGCAAAAAACAAGAAAGTCACGCTC
TTTTGCCCGCTTGATACTGCGAGTCGCAATTACCGGATTCATATTGGCGA
CTGTTTGCTTTTCCCTGTTGACCTACTGGCGTAGTCACGTGTTCCTCTTT
GTTGACTTAGGCGAATTCACAACGCTCACAAATGATCCCGAGTTAGTAGT
CTACGGGATGCATCCTGAATCAAATTCATTGATTCAAATCAAACGGCAAC
GCATAGATGGTCATACCTCTTCTTGGATGTTTTTACCCGCAAGCAACTTG
GTGATTGACCTAGATGGAAAATTCAATGATGCGCATCCAAGAGAGCTTCG
GTTTCACCGAACTTTCCAGCCGGGATTCGATACAATAAAGACCTTTAGGC
TATCTTTACCTCCCACCGCAGAGATACTTGAAAATGTCGGAATGGCATTT
ATCTCTGCGGAAACCTGGCAGCACGGTGAGGGCAAGGTGCGCGGTGATGA
GGTCCCTGCATTCTGGATAGATATCAAGCAGCTTACGATTCGTCAGTATC
TGCCCTTGCTTTTACGTGCTCTTGAAAAAAAACGAATTCAACCTCACGAG
TCCGTCCTTCTT back to top
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