Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 590 |
| Cds size | 375 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817352.0317538-UTR-P-canaliculata_contig99054:334..548 | 1622817352.0317538-UTR-P-canaliculata_contig99054:334..548 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig99054 335..548 + |
| 1693495241.297569-UTR-P-canaliculata_contig99054:334..548 | 1693495241.297569-UTR-P-canaliculata_contig99054:334..548 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig99054 335..548 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817352.0460823-CDS-P-canaliculata_contig99054:548..923 | 1622817352.0460823-CDS-P-canaliculata_contig99054:548..923 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99054 549..923 + |
| 1693495241.3071759-CDS-P-canaliculata_contig99054:548..923 | 1693495241.3071759-CDS-P-canaliculata_contig99054:548..923 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99054 549..923 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99054.24025.1 >prot_P-canaliculata_contig99054.24025.1 ID=prot_P-canaliculata_contig99054.24025.1|Name=mRNA_P-canaliculata_contig99054.24025.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=125bp
MAEYWVQHASDGLVYVYNRKCRIEGCGKRPSYGVAGTKSVEYCAQHAPDG
MVDVTSRKCRTEGCGKKPSYGVTGSKTAEYCAQHALDGMVNFHSRKCRTE
GCKIGSSYGVAGTKAAEYCAQHAPD back to topmRNA from alignment at P-canaliculata_contig99054:335..923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99054.24025.1 ID=mRNA_P-canaliculata_contig99054.24025.1|Name=mRNA_P-canaliculata_contig99054.24025.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=589bp|location=Sequence derived from alignment at P-canaliculata_contig99054:335..923+ (Pelvetia canaliculata dioecious)
CCGTGGTTTTGTGGGCAACACGTCAAGGACGAGACGGTCTACTTCTCCAG
CAGCTGAAGTTTGCAACGAAATACCAGCATTCAAAACTGAAGGCGAGCGG
GTTGTGGACTGCTGCGCATAGCAAGCCCCGAACGGGATAGTCGAGGACAA
GAACAGGTAGTGCAGAACCCGGGGCTGCTTCAATTGGCCGTCTTTCGGAG
TGGCCAGCACAAGAATGGCAGAGTACTGGGTACAGCACGCATCGGACGGG
TTGGTCTACGTCTACAACAGAAAGTGCAGAATCGAAGGCTGCGGAAAGAG
GCCGTCGTATGGAGTGGCAGGTACGAAAAGTGTTGAGTACTGTGCACAGC
ACGCACCGGACGGGATGGTCGACGTCACGAGCAGAAAGTGCAGAACCGAA
GGCTGCGGCAAGAAACCGTCGTACGGAGTGACAGGTTCGAAAACTGCGGA
GTATTGTGCTCAGCATGCACTGGACGGGATGGTCAACTTCCACAGCAGAA
AGTGCAGAACCGAAGGCTGCAAAATTGGGTCGTCGTATGGAGTTGCGGGT
ACGAAAGCTGCGGAGTATTGTGCACAGCACGCACCGGAC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99054:335..923+ >mRNA_P-canaliculata_contig99054.24025.1 ID=mRNA_P-canaliculata_contig99054.24025.1|Name=mRNA_P-canaliculata_contig99054.24025.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at P-canaliculata_contig99054:335..923+ (Pelvetia canaliculata dioecious)
ATGGCAGAGTACTGGGTACAGCACGCATCGGACGGGTTGGTCTACGTCTA
CAACAGAAAGTGCAGAATCGAAGGCTGCGGAAAGAGGCCGTCGTATGGAG
TGGCAGGTACGAAAAGTGTTGAGTACTGTGCACAGCACGCACCGGACGGG
ATGGTCGACGTCACGAGCAGAAAGTGCAGAACCGAAGGCTGCGGCAAGAA
ACCGTCGTACGGAGTGACAGGTTCGAAAACTGCGGAGTATTGTGCTCAGC
ATGCACTGGACGGGATGGTCAACTTCCACAGCAGAAAGTGCAGAACCGAA
GGCTGCAAAATTGGGTCGTCGTATGGAGTTGCGGGTACGAAAGCTGCGGA
GTATTGTGCACAGCACGCACCGGACATGGCAGAGTACTGGGTACAGCACG
CATCGGACGGGTTGGTCTACGTCTACAACAGAAAGTGCAGAATCGAAGGC
TGCGGAAAGAGGCCGTCGTATGGAGTGGCAGGTACGAAAAGTGTTGAGTA
CTGTGCACAGCACGCACCGGACGGGATGGTCGACGTCACGAGCAGAAAGT
GCAGAACCGAAGGCTGCGGCAAGAAACCGTCGTACGGAGTGACAGGTTCG
AAAACTGCGGAGTATTGTGCTCAGCATGCACTGGACGGGATGGTCAACTT
CCACAGCAGAAAGTGCAGAACCGAAGGCTGCAAAATTGGGTCGTCGTATG
GAGTTGCGGGTACGAAAGCTGCGGAGTATTGTGCACAGCACGCACCGGAC back to top
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