Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 502 |
| Cds size | 501 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817351.8367665-CDS-P-canaliculata_contig9905:4250..4337 | 1622817351.8367665-CDS-P-canaliculata_contig9905:4250..4337 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 4251..4337 - |
| 1693495241.1974974-CDS-P-canaliculata_contig9905:4250..4337 | 1693495241.1974974-CDS-P-canaliculata_contig9905:4250..4337 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 4251..4337 - |
| 1622817351.8480208-CDS-P-canaliculata_contig9905:6274..6688 | 1622817351.8480208-CDS-P-canaliculata_contig9905:6274..6688 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 6275..6688 - |
| 1693495241.2076614-CDS-P-canaliculata_contig9905:6274..6688 | 1693495241.2076614-CDS-P-canaliculata_contig9905:6274..6688 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 6275..6688 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9905.24023.1 >prot_P-canaliculata_contig9905.24023.1 ID=prot_P-canaliculata_contig9905.24023.1|Name=mRNA_P-canaliculata_contig9905.24023.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=167bp
SKPGAVLDPSVTSLFSLLSPLFRFDASFEGIRLEVLEGEGAAAVDTEGGL
ASCLECREGDPGVARSAEGENIRARDSGGAKGIFATSECRKESGRSGCSK
FQGEEASVSAVAEIKGARLSLALGSVVAGEDVTGKEIKKVSFSVKWSSAV
LAAGKSFPLDEAQAQSF back to topmRNA from alignment at P-canaliculata_contig9905:4250..6688- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9905.24023.1 ID=mRNA_P-canaliculata_contig9905.24023.1|Name=mRNA_P-canaliculata_contig9905.24023.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2439bp|location=Sequence derived from alignment at P-canaliculata_contig9905:4250..6688- (Pelvetia canaliculata dioecious)
TCCAAACCCGGGGCTGTGTTAGATCCGTCCGTCACGTCGCTGTTTTCGTT
GCTGTCTCCTCTCTTCCGCTTCGACGCCTCGTTCGAGGGGATCCGGTTGG
AGGTCTTGGAGGGCGAAGGGGCTGCCGCGGTCGATACCGAGGGAGGTTTA
GCTTCTTGTTTGGAGTGCCGTGAGGGGGACCCGGGTGTGGCCAGGTCTGC
GGAAGGCGAAAATATTCGAGCGAGGGATAGTGGTGGAGCAAAGGGTATTT
TTGCTACGTCGGAATGCCGGAAGGAAAGCGGTCGGTCGGGGTGTTCGAAG
TTTCAGGGAGAGGAAGCCAGTGTGAGCGCGGTGGCGGAAATCAAGGGCGC
GCGGTTATCACTAGCGCTTGGTTCTGTGGTGGCCGGCGAGGATGTAACCG
GGAAGGAGATAAAGGTGATTATAAACCTTGTACAAACCAGAGGATACAGC
CCAATATTTGCGATACGAAGGGTTTACTGATTGGTTCTATTAAGATTGTA
ATGTGGCATTACACTCGGGGGGGGGGGGGGGGGGGGGGACTTCCTTTTAC
AAGAGATGTTCATTTTTTTTTGGCATTTTTTCAAGCACAAGCATGGTTTT
TTTTGTGAATTTTTTTTTTCATNNNNNNNNNNTGGCTGGTTGTTTGTTTT
GGGGTTGCGTTTGGGGCGGGGGATTGTTGGGGGGGCGGGGGTGGGGGGGG
GGTGTGGGGTGGAGACTTCCTTTCACAAGAGATGTACATATTTATTTGGC
ATTTATGCAAGCACAAGCATGGTTTTTATCGAGAATTAGCTCATGCAGTT
TGTATTCAATCGTAAGGGATATATTTTGCCTTTGTCTAATAAAACTAGTT
AAAGCACATATTTTGTCTTGCCACTGATGAGTTCTGTCGGTAGAGGCAAA
GAAATGGGCCGGGGGAAACTATTGTGTCACCCATTTCCGGGGATCCATGT
ATGCAATAAACATTAAGCAGCACACGCATCACTCCGAAACCGCGAGGAAA
TCTGAGGACAATCTGAGAACTCTTGGGATCCACCGTCAATCAATCCTCCG
GTTCTTCTCAGTCGCCTCGGTCGAGTGTTAGGGGTACGATTTTTCCCTCC
CTCGCCATCATATTATTTGGTCCATGGTGATAATACACCTGAAAAGGCAG
CACCCGTTACTGGAACTACCTTGAGGACTACTGGCCCTGTGCTGGCGGAC
TCTCGGCAGTGACCGCCATCGGTAGGTTATTGCGTGACCCGATGAATCCG
GTCGCGGAAAGCGGGAGGAATCTCGCTAGTAAGGACCAGGTTCAGCCTGA
GTGTCAATGAGCAAGCTGACGCGGGACGTGACGACCGGACCTGTCTCGCG
AGACTGAATTCTCAGGCGCGAATGGGTACGGGGAACTATCCATTTTTCCC
TGTTCAGCTGACCACGAGCAGGATTGTCAACCTTACCAGGTTGATCCATA
CACTGCTGTAAGTGCTGACCATTCATACATACATTTTCGATTTGAGAAAC
TCGACCCGACCTCTCCGGGTTCCAGGGATAAACGAATGCGCTGGCTCTCC
TGGAAAGCGACGGAAGGCTTGCTAATTAAACCCTGTCGTGTACTGTTATG
AAAATATAACCCAAACGTACAAGCACGTGGCATGCGTGTCATATTGAATC
ATCTACGCATGGAACAACTGAGCACTTGATACTCGGATATACTCAAGGCA
CGTACAGCACGCATCATATCGGTGTATGGGTATACGCCATGCGCAGCATG
CACCAGTACGGGAAACTATGACAAAGGAAAGGTATAGAAAGTATGTAAAT
ATAGTGTACATCCTCGTACCAGGAGATTTTGGCGGTTTCCATCAGCGTAT
CTAATAAAAGTTGAAGTAATCCCACAAAGGCCCGTTAATAGATACACAGA
AGGATAGGAGACGTTCGGATATATTTTTGGACTACTGGTAAATATTTACG
CATGTAGCCATGACACATATTTGTAAGTACACCCACTACTAATGCTTATT
CCATGTGGGAAGAGGGATGGTCCCCAGTAGACCCGGGTATGCTTTCCTTC
CTGTCTTTCACCCCCAGGATTTCTGCGTCTGTCCCCGGCTACCCCCCCCC
CCCCCCCCCCCCCCCCCAACCCCACACAGGTTGTCACGCTCTGTCGTGGA
GCTGCTTTTCCTCCCCCCNNNNNNNNNNTTTGGGAGGGGGGTGGGCCCCC
GGTGACCCCGGGTTTGCTTCCCTCCCTGCATTCCCCCCCTAGGTTTCTTG
CTTCTGCCCCGGCCCCCCCCCCCCCCCCCCCAATCCCAAACTTAATCGAG
GTTTGCTCCGTTGCGGTGCTGTATTTGTTTGCCCCCTCCTCGCGGAAAAA
GAAGGTAAGCTTCTCAGTCAAGTGGTCGAGCGCCGTTCTCGCTGCGGGCA
AGAGCTTTCCTCTCGACGAGGCCCAAGCGCAGAGCTTCT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9905:4250..6688- >mRNA_P-canaliculata_contig9905.24023.1 ID=mRNA_P-canaliculata_contig9905.24023.1|Name=mRNA_P-canaliculata_contig9905.24023.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at P-canaliculata_contig9905:4250..6688- (Pelvetia canaliculata dioecious)
TCCAAACCCGGGGCTGTGTTAGATCCGTCCGTCACGTCGCTGTTTTCGTT
GCTGTCTCCTCTCTTCCGCTTCGACGCCTCGTTCGAGGGGATCCGGTTGG
AGGTCTTGGAGGGCGAAGGGGCTGCCGCGGTCGATACCGAGGGAGGTTTA
GCTTCTTGTTTGGAGTGCCGTGAGGGGGACCCGGGTGTGGCCAGGTCTGC
GGAAGGCGAAAATATTCGAGCGAGGGATAGTGGTGGAGCAAAGGGTATTT
TTGCTACGTCGGAATGCCGGAAGGAAAGCGGTCGGTCGGGGTGTTCGAAG
TTTCAGGGAGAGGAAGCCAGTGTGAGCGCGGTGGCGGAAATCAAGGGCGC
GCGGTTATCACTAGCGCTTGGTTCTGTGGTGGCCGGCGAGGATGTAACCG
GGAAGGAGATAAAGTCCAAACCCGGGGCTGTGTTAGATCCGTCCGTCACG
TCGCTGTTTTCGTTGCTGTCTCCTCTCTTCCGCTTCGACGCCTCGTTCGA
GGGGATCCGGTTGGAGGTCTTGGAGGGCGAAGGGGCTGCCGCGGTCGATA
CCGAGGGAGGTTTAGCTTCTTGTTTGGAGTGCCGTGAGGGGGACCCGGGT
GTGGCCAGGTCTGCGGAAGGCGAAAATATTCGAGCGAGGGATAGTGGTGG
AGCAAAGGGTATTTTTGCTACGTCGGAATGCCGGAAGGAAAGCGGTCGGT
CGGGGTGTTCGAAGTTTCAGGGAGAGGAAGCCAGTGTGAGCGCGGTGGCG
GAAATCAAGGGCGCGCGGTTATCACTAGCGCTTGGTTCTGTGGTGGCCGG
CGAGGATGTAACCGGGAAGGAGATAAAGAAGGTAAGCTTCTCAGTCAAGT
GGTCGAGCGCCGTTCTCGCTGCGGGCAAGAGCTTTCCTCTCGACGAGGCC
CAAGCGCAGAGCTTCAAGGTAAGCTTCTCAGTCAAGTGGTCGAGCGCCGT
TCTCGCTGCGGGCAAGAGCTTTCCTCTCGACGAGGCCCAAGCGCAGAGCT
TC back to top
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