Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 278 |
| Cds size | 276 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817351.9228952-CDS-P-canaliculata_contig9905:3002..3218 | 1622817351.9228952-CDS-P-canaliculata_contig9905:3002..3218 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 3003..3218 - |
| 1693495241.2398474-CDS-P-canaliculata_contig9905:3002..3218 | 1693495241.2398474-CDS-P-canaliculata_contig9905:3002..3218 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 3003..3218 - |
| 1622817351.9374511-CDS-P-canaliculata_contig9905:4043..4103 | 1622817351.9374511-CDS-P-canaliculata_contig9905:4043..4103 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 4044..4103 - |
| 1693495241.250887-CDS-P-canaliculata_contig9905:4043..4103 | 1693495241.250887-CDS-P-canaliculata_contig9905:4043..4103 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 4044..4103 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9905.24022.1 >prot_P-canaliculata_contig9905.24022.1 ID=prot_P-canaliculata_contig9905.24022.1|Name=mRNA_P-canaliculata_contig9905.24022.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=92bp
LGKLSCSGETVIDFSGPSVEIDVSGRLAFLRLTISRGGLSVLLWLAALGR
RVPLSPMPSSKPPSKLNSLPSQRNLARGHGTPLVAGSGTGIR back to topmRNA from alignment at P-canaliculata_contig9905:3002..4103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9905.24022.1 ID=mRNA_P-canaliculata_contig9905.24022.1|Name=mRNA_P-canaliculata_contig9905.24022.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1102bp|location=Sequence derived from alignment at P-canaliculata_contig9905:3002..4103- (Pelvetia canaliculata dioecious)
CTTGGAAAGCTTTCGTGTAGTGGAGAGACCGTCATCGACTTCTCTGGACC
CTCCGTGGAGGTGGGTGCCTCAGTCGACAGAGTAGGTTGTTTTACACATC
ACTTAAACCCGTACCAGTATATAACTTTGATGTATTTAGCTCCTTATTCT
CTGTACCAGTGTCTAAAAGGGTGGCAGCCGGACGAAATGGTCACGTTGAT
TGTTTTGGAAAGGCCTCGTCGTTGATCTTTTCCTCCTAAAAAGTTTACCC
TTTTGTGTCTGCTATCCCTTATTTTACAAGGGTATGATTGGTAAGGGGAT
GACGGTTCTGTATCCCTCCCTCCCGCCTTTTTTTTCTTATCTTTATCTTC
CAGTGGACCCAATCAACGGACTACGTTACCAATCCCACCTACAAGTACAA
AGGACGTTGCCATCGAACACCTCACTTTAAAACCGTATGTAGCTCCAATG
ATTTACCTGGTATTTACCTCCTTATTATCGATATTGAATATATATCAGTA
GATTGGCGCCAGCCGGACAAAAATATCGCTCATATTATTTTGATAGGCGT
CGCCATAGGTCTTCTCTCCCCCCCAAAAAACAAACAAACAAACTTGCCCT
GGCGTGTCTGCTACCCCTGATTTCTACAGGGGGTTGAATGTCGATTCTGG
ACTGCCCCCTCCAACGCTTTTTTATATTGTCTTTCTCTCTCCAAACGCCT
TTTTATTATCTCTTTCTCTTCCGATGGGCCTAATCAACGTGCTACGTTAC
CAATCCCACGTACACATCCAGCAACGTTGCCATCCCACTCGTGAAACAAA
GTCATCCTGGCACGTCTCCCAATGGCGGAACTTCCCCCCCCCCGCACCCG
CTGTGGGTGTTGTATTTCTTGTCGCGCTCTCGCAGATTGACGTCTCCGGT
CGGCTAGCCTTCCTCCGCCTTACGATTTCACGCGGAGGCCTTTCCGTGCT
GCTGTGGCTCGCGGCTCTAGGACGACGAGTCCCACTATCTCCTATGCCCT
CTTCGAAGCCGCCGTCTAAGTTGAACTCCCTCCCTTCTCAACGGAACTTA
GCCAGGGGACACGGTACACCACTGGTTGCGGGCAGCGGCACTGGCATTCG
GC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9905:3002..4103- >mRNA_P-canaliculata_contig9905.24022.1 ID=mRNA_P-canaliculata_contig9905.24022.1|Name=mRNA_P-canaliculata_contig9905.24022.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at P-canaliculata_contig9905:3002..4103- (Pelvetia canaliculata dioecious)
CTTGGAAAGCTTTCGTGTAGTGGAGAGACCGTCATCGACTTCTCTGGACC
CTCCGTGGAGCTTGGAAAGCTTTCGTGTAGTGGAGAGACCGTCATCGACT
TCTCTGGACCCTCCGTGGAGATTGACGTCTCCGGTCGGCTAGCCTTCCTC
CGCCTTACGATTTCACGCGGAGGCCTTTCCGTGCTGCTGTGGCTCGCGGC
TCTAGGACGACGAGTCCCACTATCTCCTATGCCCTCTTCGAAGCCGCCGT
CTAAGTTGAACTCCCTCCCTTCTCAACGGAACTTAGCCAGGGGACACGGT
ACACCACTGGTTGCGGGCAGCGGCACTGGCATTCGGATTGACGTCTCCGG
TCGGCTAGCCTTCCTCCGCCTTACGATTTCACGCGGAGGCCTTTCCGTGC
TGCTGTGGCTCGCGGCTCTAGGACGACGAGTCCCACTATCTCCTATGCCC
TCTTCGAAGCCGCCGTCTAAGTTGAACTCCCTCCCTTCTCAACGGAACTT
AGCCAGGGGACACGGTACACCACTGGTTGCGGGCAGCGGCACTGGCATTC
GG back to top
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