Homology
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
D7G542_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G542_ECTSI)
HSP 1 Score: 107 bits (268), Expect = 7.810e-26
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSFHQGQQG 165
+VTNDLYRDH KG++GRKKADAARRWIK+HSISYTFVGDEFFPNPDFSFHQ G
Sbjct: 1539 VVTNDLYRDHVKGIEGRKKADAARRWIKAHSISYTFVGDEFFPNPDFSFHQDGNG 1593
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A835YPQ7_9STRA (Zc3h12a-like ribonuclease NYN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ7_9STRA)
HSP 1 Score: 82.4 bits (202), Expect = 6.600e-17
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 147
+VTND YRDH + G KK +AARRW+K H+ISYTFVGDEF PNPDF F
Sbjct: 1178 VVTNDQYRDHYAALQGAKKREAARRWVKGHTISYTFVGDEFMPNPDFQF 1226
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A485LSN2_9STRA (Aste57867_25204 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSN2_9STRA)
HSP 1 Score: 75.9 bits (185), Expect = 1.320e-14
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 147
LVTNDL+RDH + + G K+ A R W+K+H IS+T+VGDEFFPNPDF F
Sbjct: 910 LVTNDLFRDHLENIKGGKQKGAMREWLKNHRISFTWVGDEFFPNPDFRF 958
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A6G0XRT9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRT9_9STRA)
HSP 1 Score: 72.8 bits (177), Expect = 1.600e-13
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 147
LVTND++RDH + + + +A R W+KSH IS+T+VGDEFFPNPDF F
Sbjct: 862 LVTNDMFRDHVENIKSNAQRNAMRDWLKSHRISFTWVGDEFFPNPDFRF 910
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A1V9YYR1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYR1_9STRA)
HSP 1 Score: 70.9 bits (172), Expect = 7.670e-13
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVD--GRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 147
+VTNDL+RDH +G++ G+KKA A R+W+ +H IS+T+VGDEFFPNPDF F
Sbjct: 1140 VVTNDLFRDHVEGMNASGQKKA-AMRQWLAAHRISFTWVGDEFFPNPDFRF 1189
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A7S2CKB1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CKB1_9STRA)
HSP 1 Score: 68.2 bits (165), Expect = 1.490e-12
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 147
+VTND+YRDH + ++ +W++SH ISYTFVGDEF PNPDF F
Sbjct: 151 VVTNDMYRDHVGKITNHRERKECLQWMRSHLISYTFVGDEFLPNPDFKF 199
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A067CRV2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CRV2_SAPPC)
HSP 1 Score: 68.6 bits (166), Expect = 4.970e-12
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAA-RRWIKSHSISYTFVGDEFFPNPDFSFHQ 153
+VTNDL+RDH G+ G + AA R+W+ +H IS+T+VGDEF PNPDF F Q
Sbjct: 835 VVTNDLFRDHVDGLQGTGQQKAAMRQWLSAHCISFTWVGDEFLPNPDFRFPQ 886
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
A0A1V9YL36_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL36_9STRA)
HSP 1 Score: 68.6 bits (166), Expect = 4.980e-12
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAA-RRWIKSHSISYTFVGDEFFPNPDFSF 147
+VTNDL+RDH G+ G AA R+W+ SH IS+T+VGDE+FPNPDF F
Sbjct: 843 VVTNDLFRDHVDGMTGTGAQKAAMRQWLNSHRISFTWVGDEYFPNPDFRF 892
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
W4FWI5_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWI5_9STRA)
HSP 1 Score: 68.6 bits (166), Expect = 4.980e-12
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSF 147
LVTNDL+RDH + K A R W+K+H IS+T+VGDEF PNPDF F
Sbjct: 909 LVTNDLFRDHLDNIKPSHKRGAMRDWLKAHRISFTWVGDEFLPNPDFRF 957
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Match:
T0QIU5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIU5_SAPDV)
HSP 1 Score: 68.2 bits (165), Expect = 6.800e-12
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 1 LVTNDLYRDHGKGVDGRKKADAA-RRWIKSHSISYTFVGDEFFPNPDFSF 147
+VTNDL+RDH G+ G + AA R+W+ +H IS+T+VGDEF PNPDF F
Sbjct: 849 VVTNDLFRDHVDGLQGNGQTKAAMRQWLSAHCISFTWVGDEFLPNPDFRF 898
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98865.24003.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.81e-26 / Id = 85.45 Expect = 6.60e-17 / Id = 69.39 Expect = 1.32e-14 / Id = 63.27 Expect = 1.60e-13 / Id = 59.18 Expect = 7.67e-13 / Id = 62.75 Expect = 1.49e-12 / Id = 55.10 Expect = 4.97e-12 / Id = 57.69 Expect = 4.98e-12 / Id = 60.00 Expect = 4.98e-12 / Id = 59.18 Expect = 6.80e-12 / Id = 58.00 Sequence D7G542_ECTSI A0A835YPQ7_9STRA A0A485LSN2_9STRA A0A6G0XRT9_9STRA A0A1V9YYR1_9STRA A0A7S2CKB1_9STRA A0A067CRV2_SAPPC A0A1V9YL36_9STRA W4FWI5_9STRA T0QIU5_SAPDV Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 108.2 Seed ortholog evalue 1.4e-21 Seed eggNOG ortholog 2880.D7G542 Preferred name EBS1 KEGG ko ko:K11124,ko:K11132,ko:K18668 KEGG Pathway ko03015,map03015 GOs GO:0000018,GO:0000019,GO:0000184,GO:0000228,GO:0000723,GO:0000781,GO:0000784,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003824,GO:0004518,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005697,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006278,GO:0006310,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007004,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0010638,GO:0010639,GO:0010833,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0017148,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031503,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032205,GO:0032206,GO:0032207,GO:0032208,GO:0032210,GO:0032212,GO:0032268,GO:0032269,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0034248,GO:0034249,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0042162,GO:0042592,GO:0042886,GO:0043021,GO:0043047,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045184,GO:0045910,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046907,GO:0048239,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051052,GO:0051053,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051276,GO:0051641,GO:0051649,GO:0060249,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070034,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0071897,GO:0071919,GO:0072695,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0098687,GO:0098847,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1904356,GO:1904358,GO:1905324,GO:1990904,GO:2000112,GO:2000113,GO:2000278,GO:2000573,GO:2001251,GO:2001252 EggNOG free text desc. zinc finger CCCH-type containing EggNOG OGs KOG2162@1,KOG2162@2759,KOG3777@1,KOG3777@2759 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03019,ko03032 Hectar predicted targeting category other localisation Exons 1 Model size 183 Cds size 183 Stop 1 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817350.0737424-CDS-P-canaliculata_contig98865:349..532 1622817350.0737424-CDS-P-canaliculata_contig98865:349..532 Pelvetia canaliculata dioecious CDS P-canaliculata_contig98865 350..532 + 1693495239.8225665-CDS-P-canaliculata_contig98865:349..532 1693495239.8225665-CDS-P-canaliculata_contig98865:349..532 Pelvetia canaliculata dioecious CDS P-canaliculata_contig98865 350..532 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98865.24003.1
>prot_P-canaliculata_contig98865.24003.1 ID=prot_P-canaliculata_contig98865.24003.1|Name=mRNA_P-canaliculata_contig98865.24003.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=61bp
LVTNDLYRDHGKGVDGRKKADAARRWIKSHSISYTFVGDEFFPNPDFSFH back to top mRNA from alignment at P-canaliculata_contig98865:350..532+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig98865.24003.1 ID=mRNA_P-canaliculata_contig98865.24003.1|Name=mRNA_P-canaliculata_contig98865.24003.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=183bp|location=Sequence derived from alignment at P-canaliculata_contig98865:350..532+ (Pelvetia canaliculata dioecious)TTGGTGACAAACGACCTTTACCGCGACCATGGGAAGGGTGTAGACGGCCG
GAAGAAGGCGGACGCGGCTCGACGCTGGATCAAGTCGCACTCCATCTCCT
ACACTTTCGTGGGGGACGAGTTCTTCCCCAACCCAGACTTTTCTTTTCAC
CAAGGCCAACAGGGTGGGGGCGGGCCGCCGTGA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig98865:350..532+
>mRNA_P-canaliculata_contig98865.24003.1 ID=mRNA_P-canaliculata_contig98865.24003.1|Name=mRNA_P-canaliculata_contig98865.24003.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=366bp|location=Sequence derived from alignment at P-canaliculata_contig98865:350..532+ (Pelvetia canaliculata dioecious) back to top