Homology
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
UPI0019190AAE (ATP-binding protein n=1 Tax=Rubrivivax sp. A210 TaxID=2772301 RepID=UPI0019190AAE)
HSP 1 Score: 110 bits (275), Expect = 2.680e-26
Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L NL+ENSLRYTDAPG+I I ++Q + + + D+AP P LFEPLYR + A H GSGLGLAI EAIAR+H G+L AS+S LGGL+++VTLP
Sbjct: 378 LANLMENSLRYTDAPGQIRIGLQQAGDEVKLVVEDSAPGVPADQWPQLFEPLYRGDAARARLHGGSGLGLAICEAIARAHGGQLRASASTLGGLRITVTLP 478
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
A0A285NGT4_9HYPH (Histidine kinase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A285NGT4_9HYPH)
HSP 1 Score: 103 bits (257), Expect = 8.890e-24
Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
LDNL+ENS RYT +PG+I I++ + + I I DTAP P+ LP LFE YRTE + H GSGLGLAI +AI +H G + A++S LGGLQV ++LP
Sbjct: 397 LDNLIENSRRYTSSPGKIAITLGELNDGYQIIIADTAPCPTELQLPKLFERFYRTESSRNRQHGGSGLGLAICKAIVDAHSGDISATASNLGGLQVGISLP 497
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
A0A515EK04_9BURK (Histidine kinase n=1 Tax=Rhodoferax sediminis TaxID=2509614 RepID=A0A515EK04_9BURK)
HSP 1 Score: 101 bits (252), Expect = 1.580e-23
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDA-GTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L NLLENSLRYT APGRI I + + ++ +T+ D+AP + LP LFEPLYR + A G QGSGLGL+I +AI R+H G ++AS+S LGGL V++ LP
Sbjct: 257 LGNLLENSLRYTHAPGRIRIRWQASATALTLTVEDSAPGVAAVHLPKLFEPLYRVDAARGRTGQQGSGLGLSIVQAIVRAHRGSVKASASELGGLAVTLVLP 358
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
UPI0015B18F9D (ATP-binding protein n=1 Tax=Rhodoferax aquaticus TaxID=2527691 RepID=UPI0015B18F9D)
HSP 1 Score: 101 bits (252), Expect = 4.580e-23
Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDA-GTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L NLLENSLRYT APGRI I + + ++ +T+ D+AP + LP LFEPLYR + A G QGSGLGL+I +AI R+H G ++AS+S LGGL V++ LP
Sbjct: 403 LGNLLENSLRYTHAPGRIRIRWQASATALTLTVEDSAPGVAAVHLPKLFEPLYRVDAARGRTGQQGSGLGLSIVQAIVRAHRGSVKASASELGGLAVTLVLP 504
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
A0A8B7N1B5_HYAAZ (Histidine kinase n=2 Tax=cellular organisms TaxID=131567 RepID=A0A8B7N1B5_HYAAZ)
HSP 1 Score: 99.4 bits (246), Expect = 7.460e-23
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L NLLENSLRYT+APG + + + + + + D+AP A LP LFEPLYR + A GSGLGLAI IA++H G++ AS+SALGGL + VTLP
Sbjct: 222 LSNLLENSLRYTEAPGHLTLRLSMAAGLVTVDVEDSAPGVPAAMLPLLFEPLYRGDTARAQQPGGSGLGLAICAVIAKAHGGQVSASASALGGLCIRVTLP 322
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
A0A411HIX1_9GAMM (Histidine kinase n=1 Tax=Pseudolysobacter antarcticus TaxID=2511995 RepID=A0A411HIX1_9GAMM)
HSP 1 Score: 100 bits (250), Expect = 8.220e-23
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
LDNLL N+ RYTDAPGRI +++ + + + ++I+DTAP ASLP LFE LYR + + + G+GLGLAI AI +HDG++EAS+S LGGL++ + LP
Sbjct: 398 LDNLLANARRYTDAPGRIRLTLVEIGEVLQLSIDDTAPGVPPASLPLLFERLYRVDGSRNRTGGGAGLGLAICRAIVAAHDGQIEASASPLGGLRIDIRLP 498
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
UPI001F5B017A (ATP-binding protein n=1 Tax=Ectothiorhodospira shaposhnikovii TaxID=1054 RepID=UPI001F5B017A)
HSP 1 Score: 97.8 bits (242), Expect = 8.630e-23
Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L+NLLEN+LRYTD GR+ ++ Q D+ + IT++DTAP +LP LFE L+R E + + H G+GLGLA+ I H G++ A+ S LGGL++SV LP
Sbjct: 157 LNNLLENTLRYTDPGGRLHVAARQKDRQLIITLDDTAPGVPADALPLLFEHLFRVEPSRSRRHGGAGLGLALCRRIVEGHGGRITAAPSPLGGLRISVCLP 257
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
A0A4P7RA68_9BURK (Histidine kinase n=1 Tax=Hydrogenophaga sp. PAMC20947 TaxID=2565558 RepID=A0A4P7RA68_9BURK)
HSP 1 Score: 100 bits (250), Expect = 8.650e-23
Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L NLL NSLRYTDAPGR+ + + +D + I ++D+AP + A L LF+PLYR + A + + GSGLGLAI AIA++H G++ A S LGG+Q+ V+LP
Sbjct: 409 LSNLLHNSLRYTDAPGRVEVRLWASDGVVHIRLDDSAPGVAPADLARLFDPLYRADSARSRHNGGSGLGLAICAAIAKAHGGRITAKPSPLGGMQLQVSLP 509
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
A7BPZ4_9GAMM (Histidine kinase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BPZ4_9GAMM)
HSP 1 Score: 93.6 bits (231), Expect = 9.170e-23
Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
+ NLLENSLRYTD GR++IS+EQ++++I + D+AP +L HLFE LYR E + + + G+GLGL+I I +H G++ AS S LGGL V V LP
Sbjct: 1 MSNLLENSLRYTDNGGRLIISLEQSEKNINLLFEDSAPGVPEEALEHLFERLYRLEKSRSRALGGAGLGLSICRNIVTAHAGEISASPSKLGGLCVRVCLP 101
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Match:
UPI001F0CEBAF (ATP-binding protein n=1 Tax=Kerstersia gyiorum TaxID=206506 RepID=UPI001F0CEBAF)
HSP 1 Score: 99.0 bits (245), Expect = 1.280e-22
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFEPLYRTEDAGTYSHQGSGLGLAISEAIARSHDGKLEASSSALGGLQVSVTLP 303
L+NLLENS+RYTD G + + +EQ D I +T+ D+AP +LPHLFE LYR E + +H G+GLGLA+ E I +H G++ +S S LGGL ++ P
Sbjct: 242 LNNLLENSVRYTDPGGLVRVRLEQADDEILLTVEDSAPGVPEEALPHLFERLYRVESSRNRNHGGAGLGLALCERIVHAHHGRITSSLSDLGGLSITAAFP 342
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98762.23986.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.68e-26 / Id = 56.44 Expect = 8.89e-24 / Id = 52.48 Expect = 1.58e-23 / Id = 53.92 Expect = 4.58e-23 / Id = 53.92 Expect = 7.46e-23 / Id = 51.49 Expect = 8.22e-23 / Id = 51.49 Expect = 8.63e-23 / Id = 48.51 Expect = 8.65e-23 / Id = 50.50 Expect = 9.17e-23 / Id = 49.50 Expect = 1.28e-22 / Id = 47.52 Sequence UPI0019190AAE A0A285NGT4_9HYPH A0A515EK04_9BURK UPI0015B18F9D A0A8B7N1B5_HYAAZ A0A411HIX1_9GAMM UPI001F5B017A A0A4P7RA68_9BURK A7BPZ4_9GAMM UPI001F0CEBAF Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98762.23986.1
>prot_P-canaliculata_contig98762.23986.1 ID=prot_P-canaliculata_contig98762.23986.1|Name=mRNA_P-canaliculata_contig98762.23986.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=101bp
LDNLLENSLRYTDAPGRIVISIEQNDQSICITINDTAPAPSMASLPHLFE back to top mRNA from alignment at P-canaliculata_contig98762:619..921-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig98762.23986.1 ID=mRNA_P-canaliculata_contig98762.23986.1|Name=mRNA_P-canaliculata_contig98762.23986.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=303bp|location=Sequence derived from alignment at P-canaliculata_contig98762:619..921- (Pelvetia canaliculata dioecious)CTGGACAACCTGCTGGAAAACAGCCTGAGATACACCGATGCACCTGGCCG
TATTGTGATATCCATAGAACAGAACGATCAATCCATTTGCATTACTATAA
ACGATACTGCCCCGGCTCCATCGATGGCATCGCTACCCCATCTGTTTGAA
CCTCTTTATCGCACAGAGGATGCCGGCACTTACAGTCACCAGGGAAGCGG
ACTGGGTCTTGCCATTAGCGAAGCCATTGCGCGCAGTCACGACGGTAAAC
TTGAAGCCAGTTCGTCTGCGCTGGGTGGCTTGCAAGTGAGCGTGACGTTG
CCG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig98762:619..921-
>mRNA_P-canaliculata_contig98762.23986.1 ID=mRNA_P-canaliculata_contig98762.23986.1|Name=mRNA_P-canaliculata_contig98762.23986.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at P-canaliculata_contig98762:619..921- (Pelvetia canaliculata dioecious) back to top