Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 290 |
| Cds size | 165 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817346.8395405-UTR-P-canaliculata_contig98514:432..555 | 1622817346.8395405-UTR-P-canaliculata_contig98514:432..555 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig98514 433..555 + |
| 1693495237.8133187-UTR-P-canaliculata_contig98514:432..555 | 1693495237.8133187-UTR-P-canaliculata_contig98514:432..555 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig98514 433..555 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817346.852311-CDS-P-canaliculata_contig98514:555..603 | 1622817346.852311-CDS-P-canaliculata_contig98514:555..603 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98514 556..603 + |
| 1693495237.8273818-CDS-P-canaliculata_contig98514:555..603 | 1693495237.8273818-CDS-P-canaliculata_contig98514:555..603 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98514 556..603 + |
| 1622817346.8642898-CDS-P-canaliculata_contig98514:892..1009 | 1622817346.8642898-CDS-P-canaliculata_contig98514:892..1009 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98514 893..1009 + |
| 1693495237.8383594-CDS-P-canaliculata_contig98514:892..1009 | 1693495237.8383594-CDS-P-canaliculata_contig98514:892..1009 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98514 893..1009 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98514.23962.1 >prot_P-canaliculata_contig98514.23962.1 ID=prot_P-canaliculata_contig98514.23962.1|Name=mRNA_P-canaliculata_contig98514.23962.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=55bp
MQDFAHSTNFLQRTEEGGCLKGLDWIQAEPMHAHGILAQVATVFDPHATC
AMKGA back to topmRNA from alignment at P-canaliculata_contig98514:433..1009+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig98514.23962.1 ID=mRNA_P-canaliculata_contig98514.23962.1|Name=mRNA_P-canaliculata_contig98514.23962.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=577bp|location=Sequence derived from alignment at P-canaliculata_contig98514:433..1009+ (Pelvetia canaliculata dioecious)
GTTGAAATCGCCGAGCTAACTAAAGGAGTATTGAAAAACGACAATCTCAT
CGTAATTTCGGTGAAGGATCTTTCGCGTCTTCCGGACTTCGACTGACTGT
AATAGTTGATCGTCGAGCCATCAATGCAAGATTTTGCCCACTCTACAAAC
TTTCTGCAAAGGACGGAGGAGGTGAGAGGGGTACACCTCATTTGAAACTT
CTTTTAATAAAACCTTCCGACCACATCCACAAAAACCTAGTTTGGGTGAA
GACCAGGGACACAATGCGCCGCGGGGATGCGAAAGCCTGCACCAAAGTAG
ATGCGCCAACACTTACTTGTGTTGAGCACCGTAAGAGTGAGAGACGTCCA
TGAAGCTTCAACGCACTTGCAGCACCATTTCATCATCCGCGTGCAACGAG
TTTTTGTCCTTACAGTCTATTTTCCCACCTAAACGTTTTGACGATTTCCC
CCCGTGACAGGGTGGATGCTTAAAAGGTTTGGACTGGATACAAGCTGAAC
CAATGCATGCTCATGGCATTCTGGCGCAAGTGGCCACGGTCTTCGATCCG
CATGCGACTTGTGCCATGAAAGGCGCA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig98514:433..1009+ >mRNA_P-canaliculata_contig98514.23962.1 ID=mRNA_P-canaliculata_contig98514.23962.1|Name=mRNA_P-canaliculata_contig98514.23962.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at P-canaliculata_contig98514:433..1009+ (Pelvetia canaliculata dioecious)
ATGCAAGATTTTGCCCACTCTACAAACTTTCTGCAAAGGACGGAGGAGAT
GCAAGATTTTGCCCACTCTACAAACTTTCTGCAAAGGACGGAGGAGGGTG
GATGCTTAAAAGGTTTGGACTGGATACAAGCTGAACCAATGCATGCTCAT
GGCATTCTGGCGCAAGTGGCCACGGTCTTCGATCCGCATGCGACTTGTGC
CATGAAAGGCGCAGGTGGATGCTTAAAAGGTTTGGACTGGATACAAGCTG
AACCAATGCATGCTCATGGCATTCTGGCGCAAGTGGCCACGGTCTTCGAT
CCGCATGCGACTTGTGCCATGAAAGGCGCA back to top
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