Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 356 |
| Cds size | 339 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817344.3001912-UTR-P-canaliculata_contig983:12872..12887 | 1622817344.3001912-UTR-P-canaliculata_contig983:12872..12887 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig983 12873..12887 + |
| 1693495236.2786827-UTR-P-canaliculata_contig983:12872..12887 | 1693495236.2786827-UTR-P-canaliculata_contig983:12872..12887 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig983 12873..12887 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817344.3196177-CDS-P-canaliculata_contig983:12887..13226 | 1622817344.3196177-CDS-P-canaliculata_contig983:12887..13226 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig983 12888..13226 + |
| 1693495236.2886922-CDS-P-canaliculata_contig983:12887..13226 | 1693495236.2886922-CDS-P-canaliculata_contig983:12887..13226 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig983 12888..13226 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig983.23932.1 >prot_P-canaliculata_contig983.23932.1 ID=prot_P-canaliculata_contig983.23932.1|Name=mRNA_P-canaliculata_contig983.23932.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=113bp
MVGVDGDCSVSKTANKIYINQRHASPPLSRSSVRPLSSPHATGASALPAR
PSTACPAPPHSVAAEKDCRVFTSTTRQRSRPCSCHATVPISHKSRRTDPC
DGGIYEIPSPLHR back to topmRNA from alignment at P-canaliculata_contig983:12873..13226+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig983.23932.1 ID=mRNA_P-canaliculata_contig983.23932.1|Name=mRNA_P-canaliculata_contig983.23932.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=354bp|location=Sequence derived from alignment at P-canaliculata_contig983:12873..13226+ (Pelvetia canaliculata dioecious)
CGGATCCTCAATTCAATGGTCGGTGTTGACGGGGACTGTTCAGTTTCCAA
GACGGCCAACAAGATATACATCAACCAACGCCATGCTTCGCCACCGCTCT
CTCGTTCCTCTGTTCGACCACTCTCCTCGCCGCACGCAACTGGTGCGAGC
GCTCTCCCGGCACGCCCATCAACAGCGTGTCCAGCCCCCCCCCATTCAGT
CGCTGCGGAAAAAGACTGTCGCGTCTTCACCTCCACCACCCGGCAACGCA
GCCGACCATGCTCATGCCACGCCACAGTACCAATCTCCCACAAATCCCGA
CGAACTGATCCCTGTGACGGAGGGATATATGAAATACCTTCTCCTCTACA
TCGG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig983:12873..13226+ >mRNA_P-canaliculata_contig983.23932.1 ID=mRNA_P-canaliculata_contig983.23932.1|Name=mRNA_P-canaliculata_contig983.23932.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=678bp|location=Sequence derived from alignment at P-canaliculata_contig983:12873..13226+ (Pelvetia canaliculata dioecious)
ATGGTCGGTGTTGACGGGGACTGTTCAGTTTCCAAGACGGCCAACAAGAT
ATACATCAACCAACGCCATGCTTCGCCACCGCTCTCTCGTTCCTCTGTTC
GACCACTCTCCTCGCCGCACGCAACTGGTGCGAGCGCTCTCCCGGCACGC
CCATCAACAGCGTGTCCAGCCCCCCCCCATTCAGTCGCTGCGGAAAAAGA
CTGTCGCGTCTTCACCTCCACCACCCGGCAACGCAGCCGACCATGCTCAT
GCCACGCCACAGTACCAATCTCCCACAAATCCCGACGAACTGATCCCTGT
GACGGAGGGATATATGAAATACCTTCTCCTCTACATCGGATGGTCGGTGT
TGACGGGGACTGTTCAGTTTCCAAGACGGCCAACAAGATATACATCAACC
AACGCCATGCTTCGCCACCGCTCTCTCGTTCCTCTGTTCGACCACTCTCC
TCGCCGCACGCAACTGGTGCGAGCGCTCTCCCGGCACGCCCATCAACAGC
GTGTCCAGCCCCCCCCCATTCAGTCGCTGCGGAAAAAGACTGTCGCGTCT
TCACCTCCACCACCCGGCAACGCAGCCGACCATGCTCATGCCACGCCACA
GTACCAATCTCCCACAAATCCCGACGAACTGATCCCTGTGACGGAGGGAT
ATATGAAATACCTTCTCCTCTACATCGG back to top
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