Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 369 |
| Cds size | 369 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817344.2625902-CDS-P-canaliculata_contig98286:432..801 | 1622817344.2625902-CDS-P-canaliculata_contig98286:432..801 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98286 433..801 - |
| 1693495236.267132-CDS-P-canaliculata_contig98286:432..801 | 1693495236.267132-CDS-P-canaliculata_contig98286:432..801 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98286 433..801 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98286.23926.1 >prot_P-canaliculata_contig98286.23926.1 ID=prot_P-canaliculata_contig98286.23926.1|Name=mRNA_P-canaliculata_contig98286.23926.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=123bp
MSAKVSYDDTSGRTQKLQLRAGQRLSIGASFSADIVLKNSQGVAGEHAEI
FFKHQKCSIRNLTGSPKKLLINGQPTKQAELANGDAIEIGSNQISFEMES
SEQSGILPATVAAPVAAVTVTLP back to topmRNA from alignment at P-canaliculata_contig98286:433..801- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig98286.23926.1 ID=mRNA_P-canaliculata_contig98286.23926.1|Name=mRNA_P-canaliculata_contig98286.23926.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=369bp|location=Sequence derived from alignment at P-canaliculata_contig98286:433..801- (Pelvetia canaliculata dioecious)
ATGTCCGCAAAAGTAAGTTACGACGACACCAGTGGCCGTACGCAAAAGCT
GCAACTTCGAGCTGGGCAACGCTTGAGTATCGGGGCATCATTTTCAGCCG
ACATTGTGCTCAAAAATTCTCAAGGCGTTGCTGGAGAGCATGCAGAGATT
TTCTTTAAGCATCAAAAGTGCTCGATTAGAAATCTCACTGGCTCGCCTAA
AAAGCTTTTGATAAACGGCCAGCCAACCAAACAAGCCGAGCTAGCCAACG
GTGACGCCATCGAAATCGGCAGTAATCAAATAAGTTTTGAAATGGAGTCG
TCAGAACAGAGTGGAATCCTACCGGCGACCGTTGCAGCACCAGTTGCTGC
GGTTACCGTAACACTACCA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig98286:433..801- >mRNA_P-canaliculata_contig98286.23926.1 ID=mRNA_P-canaliculata_contig98286.23926.1|Name=mRNA_P-canaliculata_contig98286.23926.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at P-canaliculata_contig98286:433..801- (Pelvetia canaliculata dioecious)
ATGTCCGCAAAAGTAAGTTACGACGACACCAGTGGCCGTACGCAAAAGCT
GCAACTTCGAGCTGGGCAACGCTTGAGTATCGGGGCATCATTTTCAGCCG
ACATTGTGCTCAAAAATTCTCAAGGCGTTGCTGGAGAGCATGCAGAGATT
TTCTTTAAGCATCAAAAGTGCTCGATTAGAAATCTCACTGGCTCGCCTAA
AAAGCTTTTGATAAACGGCCAGCCAACCAAACAAGCCGAGCTAGCCAACG
GTGACGCCATCGAAATCGGCAGTAATCAAATAAGTTTTGAAATGGAGTCG
TCAGAACAGAGTGGAATCCTACCGGCGACCGTTGCAGCACCAGTTGCTGC
GGTTACCGTAACACTACCAATGTCCGCAAAAGTAAGTTACGACGACACCA
GTGGCCGTACGCAAAAGCTGCAACTTCGAGCTGGGCAACGCTTGAGTATC
GGGGCATCATTTTCAGCCGACATTGTGCTCAAAAATTCTCAAGGCGTTGC
TGGAGAGCATGCAGAGATTTTCTTTAAGCATCAAAAGTGCTCGATTAGAA
ATCTCACTGGCTCGCCTAAAAAGCTTTTGATAAACGGCCAGCCAACCAAA
CAAGCCGAGCTAGCCAACGGTGACGCCATCGAAATCGGCAGTAATCAAAT
AAGTTTTGAAATGGAGTCGTCAGAACAGAGTGGAATCCTACCGGCGACCG
TTGCAGCACCAGTTGCTGCGGTTACCGTAACACTACCA back to top
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