mRNA_P-canaliculata_contig9816.23915.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: D7FZX3_ECTSI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX3_ECTSI) HSP 1 Score: 832 bits (2150), Expect = 1.890e-301 Identity = 403/440 (91.59%), Postives = 419/440 (95.23%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTYGRS 1322
H+TK+IMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQ KGF+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRGASWFA FGRKNNHGTKLFAISGHVNNP+VVEEEMSIT+RELL+KHCGGVRGGWDNLQ VIPGGSSVPVLDI+DCADVMMDFDDLK+AGS LGTAAV VMDKSVDMIAAIRRLAHFYKHESCGQCTPCR EGTGWLEQML+KMEKGEADTREIPMLEEI+R+IEGHTICALGDAAAWPVQGLIRRFQPVIE+RIAGGPEQY+SEK KYFQ+AWSGEPF NK WV Q GDG+ Y RS
Sbjct: 82 HQTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQ---KGFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFASFGRKNNHGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDINDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCR-------EGTGWLEQMLVKMEKGEADTREIPMLEEISRSIEGHTICALGDAAAWPVQGLIRRFQPVIEERIAGGPEQYQSEKGKYFQEAWSGEPFKNKAWVDQHGDGKAYSRS 511
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A835ZC73_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC73_9STRA) HSP 1 Score: 745 bits (1924), Expect = 3.480e-267 Identity = 362/437 (82.84%), Postives = 387/437 (88.56%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
+ TK+IMW GPDWIV EMK SGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A G +G NACGSGYDFD+YLHRGAGAYICGEETALIESLEGRQGKPR+KPPFPANVGVFGCP+TVTNVET+AVAPTILRRG +WFAGFGRKNN GTKLFAISGHVN+P VVEEEMSI +++LLE+HCGGVRGGWD LQ VIPGGSSVPVLDI+DC DV+MDFDDLK GS LGTAAV VMDKSVDMIAAIRRLAHFYKHESCGQCTPCR EGT WLEQ+L++ME GEAD REIPMLEEITR IEGHTICALGDAAAWPVQGLIRRFQ V+EDRI + +YFQ AWSG+PF N +W K GDG+TY
Sbjct: 74 YMTKEIMWQGPDWIVNEMKASGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYLA---GKLGANACGSGYDFDIYLHRGAGAYICGEETALIESLEGRQGKPRMKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGGAWFAGFGRKNNAGTKLFAISGHVNSPKVVEEEMSIPLKDLLERHCGGVRGGWDQLQAVIPGGSSVPVLDINDCKDVLMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCR-------EGTNWLEQLLVRMESGEADKREIPMLEEITRQIEGHTICALGDAAAWPVQGLIRRFQHVVEDRIDNADT---FDPAQYFQHAWSGQPFTNADWTKAHGDGKTY 497
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S1TYU1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYU1_9STRA) HSP 1 Score: 736 bits (1899), Expect = 9.820e-264 Identity = 362/437 (82.84%), Postives = 387/437 (88.56%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
H+TKDI+ MGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY KG IG+NACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRG+SWFAGFGRK N GTKLF ISGHVNNP VVEEEMSI +RELLE+HCGGVRGGW NLQ VIPGGSSVPVLD +DC VMMDFDDLK GS LGTAAV VMDKSVDM+AAIRRLAHFYKHESCGQCTPCR EGTGWLE++L++ME G AD EI MLEEI+R IEGHTICALGDAAAWPVQGLIRRFQ VIEDRI PE + ++ +FQ+AWSGEPF N EW G G+T+
Sbjct: 57 HRTKDILCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYA---KGMIGENACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGSSWFAGFGRKGNSGTKLFGISGHVNNPKVVEEEMSIDLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQSVMMDFDDLKAKGSGLGTAAVTVMDKSVDMVAAIRRLAHFYKHESCGQCTPCR-------EGTGWLEEVLVRMEAGNADHGEIAMLEEISRQIEGHTICALGDAAAWPVQGLIRRFQHVIEDRI-DNPEGFDADA--HFQRAWSGEPFANGEWANAHGMGKTF 480
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S2B9D4_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9D4_9STRA) HSP 1 Score: 734 bits (1895), Expect = 8.660e-263 Identity = 352/437 (80.55%), Postives = 393/437 (89.93%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
++TKDIMWMGPDW+VQE+KDSGLRGRGGAGFPSGLKWSFMPK TDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A GF+GKNACGSGYDFDVYLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCPSTVTNVET+AVAPTI RRGA+WFA FGRKNN GTKLF ISGHVNNP+VVEEEMSI+++ELLEKHCGGVRGGW+NLQ VIPGGSSVPV++ + + +MDFDDLK GSALGTAAV VMDKSVDM+AAIRRLAHFY+HESCGQCTPCR EGTGWLE++L++MEKG+AD REIPMLEEITR IEGHTICALGDAAAWPVQGLI++F+P +E R+ + + +FQ+AWSG F NK++ ++FGDG+TY
Sbjct: 78 YRTKDIMWMGPDWMVQEIKDSGLRGRGGAGFPSGLKWSFMPKATDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---GFLGKNACGSGYDFDVYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETIAVAPTIFRRGANWFASFGRKNNTGTKLFGISGHVNNPIVVEEEMSISLQELLEKHCGGVRGGWNNLQAVIPGGSSVPVMNFEQSSVALMDFDDLKAHGSALGTAAVTVMDKSVDMVAAIRRLAHFYRHESCGQCTPCR-------EGTGWLEEILVRMEKGDADVREIPMLEEITRQIEGHTICALGDAAAWPVQGLIKQFKPEMEARLTDFDS---FDPDAHFQRAWSGSEFSNKDYAEKFGDGKTY 501
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: F0Y5S2_AURAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y5S2_AURAN) HSP 1 Score: 733 bits (1891), Expect = 1.040e-262 Identity = 357/435 (82.07%), Postives = 387/435 (88.97%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGR 1307
H TKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARA YIYIRGEYFNEA+VMDEAIHEAY A G IGKNACGSGYDFD+YLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCP+TVTNVET+AVAPTILRRGASWF GFGRKNN GTKLFAISGHVNNP+VVEEEMSI REL++KHCGGVRGGW+ LQ VIPGGSSVPVL I++C + +MDFDDLK GS LGTAAV VMD +VDMIAAIRRLAHFY+HESCGQCTPCR EGTGWLE +L +ME G+AD REI ML+EI+R IEGHTICALGDAAAWPVQGLIRRFQPVIE+RIA P+ + + E +FQ AWSGE F N EW K+FG G+
Sbjct: 29 HMTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVINADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARACYIYIRGEYFNEAMVMDEAIHEAYTA---GLIGKNACGSGYDFDMYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGASWFTGFGRKNNAGTKLFAISGHVNNPIVVEEEMSIPFRELIDKHCGGVRGGWNKLQAVIPGGSSVPVLPIEECEEALMDFDDLKARGSGLGTAAVTVMDDTVDMIAAIRRLAHFYRHESCGQCTPCR-------EGTGWLETILERMEVGDADVREIGMLDEISRQIEGHTICALGDAAAWPVQGLIRRFQPVIEERIAD-PQGF--DFEAHFQHAWSGEKFKNAEWTKEFGGGK 450
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S3MFV3_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFV3_9STRA) HSP 1 Score: 734 bits (1895), Expect = 1.080e-262 Identity = 357/436 (81.88%), Postives = 390/436 (89.45%), Query Frame = 3 Query: 6 KTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
+T++IM GPDWIV E+K SGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAG+AMRARA YIYIRGEYFNEAVV+ EAIHEAY A GF+GKNACGSGYD+D+YLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAN+G+FGCP+TVTNVETVAV+PTI RRGASWFAG GR NN GTKLF ISGHVNNP+VVEEEMSIT+RELLE+HCGGVRGGW NLQ VIPGGSSVPVLD +DC +VMMDFDDLK AGSALGTAAV VMDKSVDMIAAIRRL+HFY HESCGQCTPCR EGTGW+E +L KME G+AD REIPMLEEI+RAIEGHTICALGDAAAWPVQGLIRRF+ V+EDRI PE+Y +EK+KYFQ+AWSGE F N +W Q GDG+ +
Sbjct: 80 RTREIMNQGPDWIVNELKASGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGFAMRARAGYIYIRGEYFNEAVVLQEAIHEAYAA---GFLGKNACGSGYDYDLYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANIGLFGCPTTVTNVETVAVSPTIFRRGASWFAGMGRPNNTGTKLFGISGHVNNPIVVEEEMSITLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQNVMMDFDDLKAAGSALGTAAVTVMDKSVDMIAAIRRLSHFYTHESCGQCTPCR-------EGTGWMETILNKMEHGDADLREIPMLEEISRAIEGHTICALGDAAAWPVQGLIRRFKYVMEDRI-NHPEKYAAEKDKYFQRAWSGEQFKNLKWADQHGDGKNF 504
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S3K1X1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X1_9STRA) HSP 1 Score: 733 bits (1892), Expect = 1.370e-262 Identity = 356/434 (82.03%), Postives = 388/434 (89.40%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDG 1304
+KTK+IMWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKL+EG LLAGYAMRARA YIYIRGEYFNEAVV+DEAIHEAYQA G +GKNACGSGYD+DVYLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRG SWFA FGR+ N GTKLFAISGHVNNP VVEEEMSI MREL+EKHCGGVRGGWDNLQ VIPGGSSVP+L +D+C++ +MDFDDLK GS LGTAAV VMDKSVDMIAAIRRL+HFY HESCGQCTPCR EGT WLEQML++MEKG+AD REI MLEEITR IEGHTICALGDAAAWPVQGLIRRF+ V+E+RI P + + + FQKAWSG+PF+N EW +Q+G G
Sbjct: 60 YKTKEIMWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVINADESEPGTCKDREIMRKDPHKLIEGTLLAGYAMRARACYIYIRGEYFNEAVVLDEAIHEAYQA---GLLGKNACGSGYDYDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGSWFASFGRERNSGTKLFAISGHVNNPCVVEEEMSIPMRELIEKHCGGVRGGWDNLQAVIPGGSSVPILPLDECSEALMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLSHFYSHESCGQCTPCR-------EGTSWLEQMLMRMEKGQADKREIDMLEEITRQIEGHTICALGDAAAWPVQGLIRRFKNVMEERI-NDPTAF--DHQAAFQKAWSGKPFNNHEWTQQYGAG 480
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S3L3M6_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3M6_9STRA) HSP 1 Score: 729 bits (1881), Expect = 8.370e-261 Identity = 355/437 (81.24%), Postives = 384/437 (87.87%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
H TK+IMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAY A G IGKNACGSGYDFD+YLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPA VGVFGCPSTVTNVET+AV+PTILRRGASWFA FGR+NN GTKLFAISGHV +P VVEE MSI +R+L+EKHCGG+R GWD++Q IPGGSSVPVL+ C + +MDFDDL+ GS LGTAAV + DKSVDM+AAIRRL+HFYKHESCGQCTPCR EGTGWLE +LI+MEKG+AD REIPMLEEI+R IEGHTICALGDAAAWPVQGLIR F+ IEDRI P + + E FQKAWSG+PFDN EW KQ G G+TY
Sbjct: 67 HMTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYSA---GLIGKNACGSGYDFDIYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPAGVGVFGCPSTVTNVETIAVSPTILRRGASWFASFGRENNRGTKLFAISGHVKSPKVVEESMSIPLRDLIEKHCGGMRNGWDSVQACIPGGSSVPVLNKALCDEALMDFDDLRSKGSGLGTAAVTMFDKSVDMVAAIRRLSHFYKHESCGQCTPCR-------EGTGWLEDVLIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQGLIRHFKKDIEDRI-DNPASF--DHEAAFQKAWSGDPFDNAEWTKQHGGGKTY 490
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A8K1CNK6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNK6_PYTOL) HSP 1 Score: 716 bits (1848), Expect = 9.770e-256 Identity = 345/438 (78.77%), Postives = 383/438 (87.44%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLK-RAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
H+TKDI+ MGP+WI+QE+KDSGLRGRGGAGFPSGLKWSFMPK TDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCL AG+AMRARAAYIYIRGE+FNEA+++ EAIHEAYQ KGF+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAN G++GCP+TVTNVETVAV+PTILRRGASWF+ GRKNNHGTKLF ISGHVNNP VEEEMSI +REL+E+HCGGVRGGW+NLQ IPGGSSVPVLD + C D+MMDFDDLK R GS LGTAAV + DKSVDM+AAIRRL+HFY+HESCGQCTPCR EGTGWLE ML +MEKGEAD EIPMLEE++R IEGH+ICALGDAAAWPVQGLIR+F+ I +RI P + E +FQK+W G PF N+EWV +FGDG Y
Sbjct: 70 HRTKDILCMGPEWIIQEIKDSGLRGRGGAGFPSGLKWSFMPKQTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLTAGFAMRARAAYIYIRGEFFNEALILQEAIHEAYQ---KGFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANTGLYGCPTTVTNVETVAVSPTILRRGASWFSSLGRKNNHGTKLFCISGHVNNPCTVEEEMSIPLRELIERHCGGVRGGWENLQACIPGGSSVPVLDEELCQDIMMDFDDLKQRGGSGLGTAAVTIFDKSVDMVAAIRRLSHFYQHESCGQCTPCR-------EGTGWLESMLKRMEKGEADLEEIPMLEEVSRQIEGHSICALGDAAAWPVQGLIRKFKHKIVERIED-PASFNPED--HFQKSWPGAPFQNQEWVSKFGDGSAY 494
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S0XD10_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XD10_9STRA) HSP 1 Score: 715 bits (1845), Expect = 2.790e-255 Identity = 341/437 (78.03%), Postives = 381/437 (87.19%), Query Frame = 3 Query: 3 HKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 1313
++TKD++W GPDW++ E+K+SGLRGRGGAGFPSGLK+SFMPK DGRPSFLVVNADESEPGTCKDREIMRKDP KLVEGCLL G++MRARAAYIYIRGEYFNEAVV+ EAIHEAYQA GF+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPR+KPPFPAN+G+FGCP+T+TNVETVAV PTI RRGASWFAG GR NN GTKLF ISGHVNNP+VVEEEMSIT+R+LLEKHCGGVRGGW N+Q IPGGSSVPV+D +DC D +MDFD LK G+ALGTAAV V DKSVDM+AAIRRL+HFY HESCGQCTPCR EGTGWLE++L K+E GE D REIPMLEEITR IEGHTICALGDAAAWPVQGLIRRF+ V+EDR+ P+ + EK YFQK+WSG PF N W K+ G+ RT+
Sbjct: 69 YRTKDLLWQGPDWLISELKNSGLRGRGGAGFPSGLKYSFMPKKNDGRPSFLVVNADESEPGTCKDREIMRKDPQKLVEGCLLVGFSMRARAAYIYIRGEYFNEAVVLQEAIHEAYQA---GFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRIKPPFPANIGLFGCPTTITNVETVAVTPTIFRRGASWFAGLGRPNNRGTKLFGISGHVNNPIVVEEEMSITLRDLLEKHCGGVRGGWSNIQACIPGGSSVPVMDENDCQDAIMDFDGLKAKGTALGTAAVTVFDKSVDMVAAIRRLSHFYAHESCGQCTPCR-------EGTGWLEEILTKLETGEGDKREIPMLEEITRQIEGHTICALGDAAAWPVQGLIRRFKHVLEDRL-DNPQNWNEEK--YFQKSWSGLPFKNDAWAKEHGEDRTF 492 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9816.23915.1 >prot_P-canaliculata_contig9816.23915.1 ID=prot_P-canaliculata_contig9816.23915.1|Name=mRNA_P-canaliculata_contig9816.23915.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=435bp MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADback to top mRNA from alignment at P-canaliculata_contig9816:2015..10667- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9816.23915.1 ID=mRNA_P-canaliculata_contig9816.23915.1|Name=mRNA_P-canaliculata_contig9816.23915.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=8653bp|location=Sequence derived from alignment at P-canaliculata_contig9816:2015..10667- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9816:2015..10667- >mRNA_P-canaliculata_contig9816.23915.1 ID=mRNA_P-canaliculata_contig9816.23915.1|Name=mRNA_P-canaliculata_contig9816.23915.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2610bp|location=Sequence derived from alignment at P-canaliculata_contig9816:2015..10667- (Pelvetia canaliculata dioecious)back to top |