Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 147 |
| Cds size | 147 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817342.2614763-CDS-P-canaliculata_contig9801:4362..4441 | 1622817342.2614763-CDS-P-canaliculata_contig9801:4362..4441 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9801 4363..4441 + |
| 1693495234.9521298-CDS-P-canaliculata_contig9801:4362..4441 | 1693495234.9521298-CDS-P-canaliculata_contig9801:4362..4441 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9801 4363..4441 + |
| 1622817342.2798781-CDS-P-canaliculata_contig9801:11622..11690 | 1622817342.2798781-CDS-P-canaliculata_contig9801:11622..11690 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9801 11623..11690 + |
| 1693495234.9642024-CDS-P-canaliculata_contig9801:11622..11690 | 1693495234.9642024-CDS-P-canaliculata_contig9801:11622..11690 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9801 11623..11690 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9801.23897.1 >prot_P-canaliculata_contig9801.23897.1 ID=prot_P-canaliculata_contig9801.23897.1|Name=mRNA_P-canaliculata_contig9801.23897.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=49bp
LSGSIPKELAQLGALKKLHLSYNKLEGSIPKELAQLGALEGLFLYSNEL back to topmRNA from alignment at P-canaliculata_contig9801:4363..11690+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9801.23897.1 ID=mRNA_P-canaliculata_contig9801.23897.1|Name=mRNA_P-canaliculata_contig9801.23897.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=7328bp|location=Sequence derived from alignment at P-canaliculata_contig9801:4363..11690+ (Pelvetia canaliculata dioecious)
TTGTCAGGTTCGATACCGAAAGAGCTGGCGCAACTTGGCGCTCTTAAGAA
ACTTCACCTCTCCTACAACAAGCTGGAAGGTGAGAGAGAAGCATCGAGGC
TATTCGTAGTCAATATATTGCAAATATATATATAAGTTGTATTGAACGAT
TATTACCTTGGCGTGTGGGTGTATAACTAAGCGCTTTGGATTGGGTCATT
TTACTTACGCTTTGAAAACATTCTTGAGACGGTTTGATGACACGAAAAAT
TGGTTGGATTTTATTTCTTCTGTGGGTCAAAAAGATACGCGTTCTCGGAA
AAAAAGTCCGTTTTCATTTTCACCAATAATTTGTCAATATTAATAGCAAT
CGACTTGTACTATAGTCAACACTGTACTCGCAGAAAGATATTTGGCAACC
ACGCGTCAAAGAGTGTGAGATCGATTCATTTTTTGTCAAATCGCTGAAAG
CTACTGGTACAAGACCCATAGAGTAATGCATTCCGACCGTACCAACGCTA
TTTCTCGCTCTGCTACTTTACTAATGGCACCCTGAAGGACTTATCCGGCT
TTGACATTCAAATTGTTAGCTGAAAGTCGGGTTTAGATGTCTTTCGTCCA
CGAGGTATTTTCCATATACTACATTGACTGAAGACAAACACTCTATGGGC
CAAGTTTGAACCAAAAAATAACTTCAAAACCACGTTTCCGTAGTGAAGCT
GAGGTGGGACCTGGGACTTGTAGGATTGTGTGACGCTTCCGGTAAATTGG
TGTATTTCGCAGGTTATGACGTGTCAAACCAATTCCACCCTCGAGGGGCT
GTACAACCGGCTGTTTGCTCGACCCAGCTGGTTGTTTAACAAGCGGTGGC
AGCTTGGTTGCGTCATATCCTGAAATACTCGCAACGCCCCAGACAGTAGA
TGCTGTAGTTCGTACCATGAGGGCTTTGTCGTGACGCGAGTATGATATGT
TGCAGTTGTGCTCGTCTGGTTGCGCCTAACTAGGATTTTGTCGCGATTTC
GATTATAAAATTTGGTTAGATATCATTTCCTCTGGTGGCCAAATAGAAGC
TTGCTTTCGAAAAGAAACTCTGTCTATTCCCAATCCGAGCTTCAACTCTC
ATAAAGACATAGGATTCTGAACACAGAAGCCATCGGTAAGTGATGTGGCT
GCCCTGAAAGTACGCCTTGACATGCCACACTGTCACTGGAAATTGAAGCA
CGTCGCAATATTTCCTTTCACGTTGTGCCATATAAACCAGTCTCGTGAAC
TGTACCTGCGGGGAGACTGCGTCGACCTTATCCGTCTGTCCGGCCTAGCC
TCTAGGGCCACAGTTCCATCGCCACACTTCTTTACTATATTTTATTCCTG
GCGATATCCGAAACGCCTACTACCCTTTCTTTCTCATGGCCTCACCCTCC
CGCTCGTAGCGACCCTAAATAATCAGCTTAGCTTAGTTCACCCAACAAAC
CCAGGCACAGGATCTTTGATGTGGATCGATGGAAAATAAAGGTATCTATA
CACACACTTGCATGTCATCTGACGACGCCAGAAGGATATTGTTAACGTAA
ACAGAAACCTCCTTCCTCACCCTACCTAAAAACCTCCGATGACAGCTTAC
ATCCAACAGCTATAATTTACAGTGCCGTCAAAACAAAACAAAAACCCGGA
AATTTCGGACGACTTTTTTCCCACAATCGGTTCTACCTATTCTCTCTCCC
TCGCCAACCCCTCGTCCTCACTTCTATCGGTAGTAATCGGATTCCCCCAA
AATCATCCACGTATCGCCCGACGTTCCGTCAACCGTCCCGCAGCACTTTT
GAGGAGGCCACGTCGGACGTTCCTTGCCCCTGACAAAAACAGTCTCCTGA
AGTGCCCAGTTGTCGAAGTATCCACTTCACAGTATAAGGATATCAAGAAT
GATCTAGTCAAAGGCCCACTAGATAGACGTACCGTAGTGATCTATGTTGG
TATATCCGTGCGAAGTATATGACATAAGCGTACCTAACCACAACGGCTTG
GTCCCATCATACGATGCTTGCTGTAAGCCCGGGGCTTCCCTCCCAGGAAA
GAATGTCACCGCCTTGTATGGTATTTGGACCTCAATGATTTATCGATGCC
ATCAAACCGGTAATGTAATCTACACAAGCAGTACCCTTAGGTTTTATCGA
AAAGGTGACGCAGCGTACCATTTAAGTATTTTGCGATATTTGGGAAGCCA
GACTCTCTTTTGAGTCTTACGCTTACTTCCTACATATGTATCTCCCTGTT
GCTTGTCAGGTTCGATACCGACAGAGCTGGCGCAACTTGGCGCTCTTGAG
GTACTTCACCTCTCCAACAACAAGCTGGAGGGTGAGAGAGAAGCATCGAG
GCTATTCGAAGTCGAAATATTGCAAATATATATAAGTTGCATTGAATGAT
TATTACATTGGCGTGTGGTTGTATAACTAAGCGCTTTGGATTGGGTCATT
TACACACGCATTGAAAACGTTCTTGAGACGGTTTGATGACATGAAAAATT
GGTTGGATTTTATTTCTTCTGTGGTTCAAAAAAATACGTGTTCTCGGACA
AAAAGTTCGTTCTCTAATTTACCAAGAATTTGTTGATATTTATAGGAATC
GACTTGTTGTACCATAGACAACGCTGTACTCGCAGAAAGATACTCGGCAA
CCACGCATCAAAGCGTGTCAGATCGATACATTTATAGTCAAATCGCTGAG
AGCTACTGGTACAAGACCCAAACAGTAATGCAATCGTACCGCACCAACGC
TATTTCTCACTCTGCTGCTTTACTATTGGCACCCTGAAGGACTTATCCGA
CTTTGACACTCAAATTGTTAGCTGAAAGTCGTGTTTAGATGTCTTTCGTC
CACGAGGTCTTTTCCATATACTACATGGTCTGAAGGCAAACACTCTATGG
GCCAGGTTTGAACCAAAATTTAACTTCAGAACCACGTTTCCGTAGTGAAG
CTGGGGTGGGAACTGAGACTTGTAGCGTTGTGTAACGCTTCGGGTAAATT
GGTATATTTCGCGCGATATGACGTGTCACACCTATTCCACCCTCGAGGGG
CGGTACGAACGGGCTGTCCACTCGACTCAGCTGGTTGGTTCACAAGCGGT
GGCAGCTTGGCTGTGTAATATCCTGAAATACTCGCAGCGCCCCAGACAGT
AGAGGCTGTAGTTCGTACCATGAGGGCTTTGTCGTGACGCGAGTATGATA
TGTTGCAGTTGTGCTCGTCTGGTTGCGCCTAACTAGGATTTCGTCGCGAT
TTCGATTATAAAATTTGGTTAGATTTCATTTCCTCTGGTGGCCAAATAGA
AGCTTGCCTTCGAAAAGAAACTCTGTCTATTCCCAATCCGAGCTTCAACT
CTCATAACGACATAGGATTCTGAACACAGAAGCCATCGGTAAGTAATGCG
GCTGCCCTGGAAGTACGCCTTGACATGCCCCACTGTCACTGGAAATTGAA
GCACGTCGCAATATTTCCTTTCACGTTGTGCCATATATACCAGTCTCGTG
AACTGTACCTGCGAGGAGACTGCGTCGACCTTATCCGTATGTCTGGCATA
GCTACTAGGGCCACAGTGCCATCGCCACACTTCTTTACTATATTTTATTC
CTGGCGATATCCGAAACGCCTACTACCCTTTCTTTCTCATGGCCTCACCC
TCCCGCTCGTAGCGACACTAAATAATCAGCTTAGCTTAGTTAACCCAACA
AACCCAGGCACAGGATCGTTGATGTGGATCAATGGAAAATAAAGGTATCT
ATACACACACTTGCATGCCAACTGACGACGCCAGAAGGATATTGTTAACG
TAGACAGAAATCTCCTTCCTCACCCTACCTAAAAACCTCCGATGACTACT
TACATCCATCAGCTATCATTTACAGTGCCGTCAAAACAAAACGAAAAACT
GGAAATTTCGGACGACTTTTTTCCCACAATCGGTTCTACCTATTCTCTTT
CCCTCGCCAACCCCTCGTCCTCACTTCTATCGGTAGTAGTCGAATTCCTC
CAAAATCATCCACGTATCGCCCCACGTTCCGTCAATCATCCCGCAGCACT
TTTGAGGAGGCCACGTCGGATGTTTCTTGCCCCTGGCAAAAACAGCCTCC
CGAAGTGCCCAGTTGTCGAAGTATCCACATTACAGTAAATGGATATCAAG
AATGATCTAGTCAAGGGCCCACTAGATAGACGTACGGTAGTGATCTATGT
TGGTATATCCGTGCAAAGTATATGACATAAGTGTACCTAACCACAACGGC
TTGGCCCCATCATACGATGCTTGATGTAAGCCCGGGGCTTCCCTTCCAGG
AAAGCATGTCACCGCCGTGTAGTGTATTTGGACCTTAACGATCTATCGAT
GCCATCAAACCGGTAATGTAATCTACATAAGCAGTACCCTTAGGTTTTAT
CGAAAAAGTGACGTAGTGTTCCAAAAAAGTATTTTGCGAAATTTGGGAAG
CCAGACTCTCTTTTGAGTACTACGCTTACTTACTACATATGTATCTCCCT
GTTGCTTGTCAGGTTCGATACCGACAGAGCTGGCGCAACTTGGCGCTCTT
GAGGTACTTAACCTCGCCTACAACAAGCTGGAAGGTGAGAGAAAAGCATC
GAGGCTATTCGAAGTCAAAATATTGGAAATATTTATAAGTTGTATTGAAT
ATTAATTACATCGGCGTGTGATTGTATAACTAAGCGCTTTGGATTGGGTC
ATTTACATACGCATTGAAAACGTTCATGAGACGGTTTGATGACACGAAAA
ATTGGTTGGATTTTATTTCTTCTGTGGGTCAAAAAGATACGTGTTCTCGG
AAAAAAGTCCGTTCTCAATTTCACCAATAATTTGTTAATATTAGTAGCAA
TCGACTTGTTGTACTATAGACAACGCTGTACTCGCAGAAAGATACTCGGC
AACCACGCGTCAAAGTGTGTCAGATCGAAACATTTATAGTCAAATCGCTG
AGAGCTACTGGTGCAAGACCCAAACAGTAATATATTCGTACCGCACCAAC
GCTATTTCTCGCTCTGCTACTTTACTATTGGCACCCTGAAGGACTTATCC
GACTTTGACACTCAAATTGTTAGCTGAAAGTCGTGTTTAGATGTTTTTCG
TGTCCACGAGGACTTTTCCATATACTACATGGTCTGAAGGCAAAATTAAC
TTCAAAACCACGTTTCCGTAGTGAAGCTGGGGTGGGACCTGGGACATGTA
GGGTTATGTAACACTTCCGGTAAAGTGGTATATTTCGCGCGATAAGACGT
GTCACACCTATTCCACCCTCGAGGGGCGGTACGAACGGGCTGTCCACTCG
ACTCAGCTGGTTGCTTCACAAGCGGTGGCAGCTTGGTTGTGTCATATCCT
GAAATACTCGCAGCGTCTCAGACAGTAGATGCTGTAGTTCGTACCCCGAG
GGCTTTGTCGTGACGCGAGCATGATATGTTGCATATGTGCTCGTTTGGTT
GCGCCTAACTAGAATTTTGTCGCGATTTCGATTTTAAAATTTGGTTAGAT
TTCATTTCCTCTGGTGGCCAAATAGAAGCTTGCCTTCGAAAAGAAAGTAT
GTCTATTCCCAATCCGAGCTCCAATTCTCATAACGACATAGGATTCTGAA
CACAGAAGCCATCGGTAAGTAATGCGGCTGCCCTGGAAGTACGCCTTGAC
ATGCCCCACTATCACTGGAAATTGAAGCACGTCGCAATATTACCTTTCAC
GTTGTGCCATATAAACCAGTCTCGTGAACTGTACCTGCGAGGAGAGTGCG
TCGACCTTATCCGTCTGTCCGGCCTAGTCTCTAGGGCCACAGTGCCATCG
CCACACTTCTTTGCTATATTTTATTCCTGGCGATATCCGAAACGCCTACT
ACCCTTTCTTTCTCATGGCCTCGCCCTCCCGCTCGTAGCGACCCTAAACA
ATCAGCTTAGCTTAGTTAACCCAACAAACCCAGGCACAGGATCTTTGATG
TGGATCAATGGAAAATAAAGGTATCTATACACACACTTGCATGTCAACTG
ACGAAGCCAGAAGGATATTGTTAACGTAAACAGAAACCTCCTTCCTCACC
CTACCTAAAAACCTCCGATGACTACTTACATCTAACAGCTATCATTTACA
GTGCCGTCAAAACAAAACGAAAAACCGGAAATTTCGGACGACTCTTTTCC
CACAATCGGTTCTACCTATTCTCTCTCCCTCGCCAACCCCTCGTCCTCAC
TTTTATCGGTAGTAGTCGAATTCCCCCAAAATCATCCACGTATCGCCCCA
CGTTCCGTCAACCATCCCGCAGCACTTTTGAGGAGGCCACGTCGGATGTT
CCTTGCCCCTGACAAAAACAGTCGCCCGAAGTGTCCAGTTGTTGAAGTAT
CCGCTTTACAGTATAAGGATATTAAGAATGATCTAGTCAAGGGCCCACTA
GATAGACGTACCGTAGGAATCTATGTTGGTACATTCGTGCAAAGTATATG
ACATAAGTGTACCTAACCACAACGGCTTGGCCCCATCATACGATGCTTGC
TGTAAGCCCGGGGCTTCCCTCCCAGAAAAGCATGTCACCGCCGTGTAGTG
TATTTGGACCTCAACGATCTATCGATGCCATCAAACCGGTAATGTAATCT
ATTTATCGAAAAGGTGACGTAGCGTACCAAAAAAGTACTTTGCGAAATTT
GGGAAGCCAGACTCTCTTTCGAGTATTACGCTTACTTATTACATATGCAT
CTCCCTCTTGCTTTTCAGGTTCGATACCGACAGAGCTGGCACAACTTGGC
GCTCTTCAGGTACTTAACCTCGCCTACAACAAGCTGGACGGTGAGAGAAA
AGCATCGAGGCTATTCGAAGTCGAAATATTGCAAATATATATAAGTTGTA
CTGAACGATTGTCACATTAGCGTGGGGGTGTATCTCTAAGCGTTCGCCAC
ACTTCTTTGCTATATTTTATTCCTGGCGATATCCGAAACGCCTACTACCC
TTTTTTTCTCATGGCCTCACCTTCCCGCTCGTAGCAACCTAACCACAACG
GCTTGGCCCCATCATACGATGCTTGCTGTAAGCCCGGGGCTTCCCTCCCA
GGAAAGCATGTCACCGCCGTGTAGTGTATTTAGACCTTAACGATCTATCG
ATGCCAACACGTAATGTAATCTACATAAGCAGTACCCACAGGTTTCTCCG
AAAAGGTGACGTAGCGTACCAAAAAAGTATTTTGCGTAATTTGGGAAGCC
AGACTCTCTTTTGAGTACTACGTTTGCTTACTACATATGTATCTACCTGT
TGCTTGTCAGGTTCGATACCGAAAGAGCTGGCGCAACTTGGCGCTCTTGA
AGGACTTTTCCTCTACAGCAACGAGCTG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9801:4363..11690+ >mRNA_P-canaliculata_contig9801.23897.1 ID=mRNA_P-canaliculata_contig9801.23897.1|Name=mRNA_P-canaliculata_contig9801.23897.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at P-canaliculata_contig9801:4363..11690+ (Pelvetia canaliculata dioecious)
TTGTCAGGTTCGATACCGAAAGAGCTGGCGCAACTTGGCGCTCTTAAGAA
ACTTCACCTCTCCTACAACAAGCTGGAAGTTGTCAGGTTCGATACCGAAA
GAGCTGGCGCAACTTGGCGCTCTTAAGAAACTTCACCTCTCCTACAACAA
GCTGGAAGGTTCGATACCGAAAGAGCTGGCGCAACTTGGCGCTCTTGAAG
GACTTTTCCTCTACAGCAACGAGCTGGTTCGATACCGAAAGAGCTGGCGC
AACTTGGCGCTCTTGAAGGACTTTTCCTCTACAGCAACGAGCTG back to top
|