mRNA_P-canaliculata_contig98.23894.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Match: D7FJS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS0_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.350e-106
Identity = 522/1713 (30.47%), Postives = 692/1713 (40.40%), Query Frame = 1

Query:    1 PAGWLSTAISSGKLGVAADDID-DDDGQTGEDGRSLKMVTSSTQDRETEDSTRAPAST------LPPWAARWTPP-SPDPPPEVEEKSTVVSEAKPKPSGLDWIKSEMPYWLKEV----SSR---GGVSMHDTVASARNSDGAVLSGRGGETNVA-PPTVGAAAS----ESGVDCVVDSVVSEKTEARVREGREERYPSAMTAAATS--------GGWLTSGKLGVSIEKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSSATIPTTTGPGGWLASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTGSKLPPWAKPWTPPPEPDVTVDP-------VPPRDKDTKKQDIAVVVTPDWILASLGQGDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTSDWLLHTVVDGGGGVGGAKLKKPNQP-----STSVAPDALSWMTKMKRRSSIDLEDPCVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAAS----------SHSRGRRESLAGGLPPWAPMQQQKKAPVLVDAAPATSXXXXXXXXXXXXXXAP-------AVATEASSRLRKAGAPSTHKDARQGGCSSEKQQAQQLALPDWLTIAAVSQCPCIFDNRDRLQENRDDCDAVADDREGGLDWLKAAITSDKKVAATPSAIVTVHESVDESRSTQAAMSIAVGDSVHGGGTKNVVRRRS-SLVTTEGWISMN-LGLPV----DDEYALNGKESDVRGTGMVSKTAKKRSPGIAANDDRGLVVQPAGWLSAAISTGKIGVAADDSDDDDGQTGEDGRSLNMVSSSTHWEDGETEDRTRAPAST-----FPPWAERWTPPSPDPP--PEIEEQPTVES-EAKPKPSG--LDWIKNEMSCTPADTSKGASAGDDKVVA---NGCSNTIGESSGLDWLKETNATSAPPTVGATVGGSGI-DRLVDAAASEKTEARVREGREDRNPSAMTAAATSGDWLTSGKLGVSIEKASGDDAGTGGVCDSGHGLSTGRKSKPGVKTSSSAIISTATGPGGWLASGTLGVPVDDESERSAQDGEEGMRGSFMVSEETQTEEDIEEIAKKGTGSKLPPWAKPWTPPSEPDATGDPVPLRDKDNKKQDIAVAVTPDWILASLGQSHDDAPAETATSGGLDSEGKGLDWLAKVLDPGSMLLPTAAGSNTFDWLLQTVVGGGGGAGEAK--------LKKKPNQPSTSVAPNPLSWMTKMKHRSSIDLEDPCTEALVVEAKTKAGRGSWMQSGTLGAPDSIEEEKALEEARAASSYPRPSNKACSSD---ATADRHPSLSDGAPAWTLKQLTETGAGESKEPWRGRRGSLAGGLPPWAPTQQQ-------EKAPVLVDVAPATSXXXXXXXXXXXXXXVPSVATELSSRLNHGGYVSPCVPEPLAGSVGKAGAPSTYYEDTRQGWCSSEKQQAQQLTLPDWLTVAAGGSSTKAEKRFPGIAANDDIEPVAQPAGWLSAAISTGKIGVAADDAAARGSGIDWLVDTAASEKTEARVREGREERNPYAMTAAATG-GWLTSGKLGVSTEKDRGHE----AGTGGVCGSGHELSTGRKPKSGIKMSSSATIPTTTGPGGWLA----SGTLGVPVDDESERSTQDVDGGMRSSFMVSGETQTEEYIEEVAKKGIG----SKLPPWAKPWTPP 4815
            P GW+S    SG LG  A+D   D+D   GE  R + +   +  + + E  T+  A+       LPPWA  + PP  P+  P+   K+    +  P+  G     SE+P WL  V    SSR    G  + +   +A   D A   G    T  A   T GAAA                      A    G+ +R P A   AA          GGWL+S KLGVS E+DS  +       D+G     + K +K K   + S S                       +          G      +++ ETQTE+DIE V ++G   KLPPWAKP+ PPP+ DV  D        +PP  ++T         TPDWILASLG  D +  +    + G    G   +WL++  +    +     P    +N  DWL                  P Q        +V    LSWM ++KR+SS+DL+D  VE  V + K KA PGGW+Q G LG+PD++ EE  LE+ARAAS          S S GRR SL+GG PPWAP +++     + D+   T+     XXXXXXXXX         AVA EA +  +K G+    K+  +   S        + + DWL  AA +      ++ + L E RD  D  A     GL WL  A  S K  AA      T    VD S     A  +AV  S         V+R S       GW+S   LGLP     DD+ A  GK S   G+G V+K              RG V                         ++G  G++ R    V+  T  +D + E  TR  A        PPWA+ + PP P P   P+   + T+E  E +P  SG    W+   ++  PAD     + G ++ +     G     G + GL WL E    ++  T  AT   + + D L DA +   T+         R   A   +A  G W++SGKLGVS     G D    G  D G      +K +P     S   +S A GP GWL+SG LGVP  DES+    D + G     M + ETQTEE+IEE  K   G KLP                          ++ D     TPDWILASLG   + A A  A  G   S G   DWL +    G     T  GSN  DWL Q        A  AK          ++P     +   +PLSWMT MK RSS+DL D   E  + +AK K   G W+Q G LGAPD++EE  ALEEARAASS  R S     +    AT  R PSL  G P W  K  T   A  S    RGR               QQ       E+     D +P   XXXXXXXXXXXXX    VA                            G+P++      +      + +     LPDWLT AAGG S   + R  G  +  D +      GWL+          + D   ++ +    L D A +E+T A   +          +    G GWL++  +     K R HE    A +  V  S       ++                T PGGWLA    SG LG   DD       D       +      TQT++ +   AKK +     SK P   KP  PP
Sbjct:  580 PGGWMS----SGALGAPAEDESGDEDSGGGETDRGVGVTIETQTEEDIEAVTKGGATEKGNAPKLPPWAKPYVPPPKPEVVPDTPPKADSAPQGAPEKQG-----SEIPDWLAAVAGTSSSREDPSGAMIEEAGPTAGQEDSAGGGGLSWLTQAARSSTFGAAAPIDXXXXXXXXXXXXXXXXXXXAAKSTGQTKRKPHATATAAAKAAAVPAAPGGWLSSVKLGVSTEEDSDQD-------DAGKTAGRSTKSKKKKKQARGSVSVASXX------XXXXXXXXXXXPEXXXXXXXXXGGGDSQPVLVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVAPDSTADSTAEIPPEKEETDAS-----ATPDWILASLGDQDADGFSGGVPASG----GGSNNWLSQAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQRPGIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLTSTGPESRSRSEGRRPSLSGGPPPWAPAKEEG---AVGDSGSTTTSTHDVXXXXXXXXXXXXXXXXPTAVAAEAETTEQKEGSEEAAKEKGEPATSG-------VRVSDWLAAAATTGTASGEESTNALGEERDQQDGEASGGSDGLSWLTQAADSHKPSAAASGIPSTA--GVDSSEGDAGADWLAVAKSSGQAKRSPAVKRPSVGAAAPGGWMSSGKLGLPAGDGSDDDQA--GKTS---GSGGVAKAKXXXKA-------RGSVSGTXXXXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAVTIETQTDD-DIEAATRGAAERGSTRKLPPWAKPYVPPDPIPEVVPDTAAELTIEKQELEPAGSGGVPSWLAA-VAGAPADEKHSDALGQERALEADEGGVGQASGGNDGLGWLTEA---ASKDTAAATPASTSVPDWLGDATSRGMTKHNKSSTAAKR---ASIKSAAPGGWMSSGKLGVSTGD-DGSDEDQAGKTDRGSAKPRKKKKQP-----SRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGR--PLMATTETQTEENIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXXXXXEQEHDTPA--TPDWILASLGPDAEGAAAAPAPGG---SPG---DWLVQENQAGGGPTGTGGGSNGPDWLQQATA-----APTAKPANRSRGAATQRPGGGRKAATQSPLSWMTSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQMGALGAPDAVEEANALEEARAASSLTRTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKLATTALASSSSS--RGRXXXXXXXXXXXXXQHQQGGGSPSAEQLKARADESPXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPESEQATPALPDWLTAAAGGGSAPKDTRGDG-ESTIDTDDDGGGLGWLTQXXXXXTTSKSQDRKGSQEAADTALDDEARTERTAAGSTDAACNDVSSEHSGGGEGLGWLSAAVVRRPQMKSRTHELQPTATSTNVVASKSRAQ--QRXXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLVGDGTNNGGDTGKEDTATQTDDVVIVEAKKSVSEQTTSKNP--TKPKLPP 2201

[Close]

BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Match: A0A6H5KKG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG6_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.870e-44
Identity = 171/486 (35.19%), Postives = 216/486 (44.44%), Query Frame = 1

Query:   70 DDGQTGEDGRSLKMVTSSTQ-DRETEDSTRAPAST-----LPPWAARWTPPSPDPPPEVEEKSTVVSEAKPKPSGLDWIKSEMPYWLKEVSSRGGVSMHDTVASARNSDGAVLSGRGGETNVAPPTVGAAASESGVDCVVDSVVSEKTEARVREGREERYPSAMTAAATSGGWLTSGKLGVSIEKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSS-ATIPTTTGPGGWLASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTGSKLPPWAKPWTPPPEPDVTVDPVPPRDKDTKKQDIAVVVTPDWILASLGQGDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTS-DWLLHTVVDGGGGVG----GAKLKKPNQPSTSVAPDALSWMTKMKRRSSIDLEDPCVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAASSHSR 1491
            ++G  GE  R    V   TQ D + E +TR  A       LPPWA  + PP  DP  EV   +   S  + K    D +  E      E    GGV      +  R+  G +       T  A P     AS S  D +  +     T+   R    +R   A   +A  GGW++SGKLG++   DS DE   G          T R   KP+   K      ++P   GP GWL+SG LGVP   ES+    D DG      M + ETQTE++IE   K   G KLPPWAKPWTP P                         TPDWILASL    + AAA  A        G+  DW  +      +   G P    G +T  DWL        G       GA  ++P     + A   LSWM+ MKRRSS+DL D  VE  + + K K  PGGW+Q GALG+PD++EE  ALEEARAASS +R
Sbjct:  402 EEGSGGEKDRRGAAVNIETQTDNDIEAATRGAAEKGDTRKLPPWAKPYVPP--DPTQEVVPDTAAESTIE-KQKNSDALGQERALEADE----GGVGQ---ASGGRDGLGWLTEAANKNTAAATP-----ASSSAPDWLAGAKSRGTTKHNKRSTAAKR---ASIGSAAPGGWMSSGKLGLATGDDSSDEDQAG---------KTDRGSAKPRMKKKKQQRRGSVPAAGGPAGWLSSGALGVPAQYESDENGGDSDGGR--PLMATTETQTEDNIEAATKTANGPKLPPWAKPWTPXPPXXXXXXXX--XXXXXXXXXXXXPGTPDWILASLDPDTEGAAAAPAPG------GSPGDWHVQ-----ENQAGGGPAGTGGGSTGPDWLQQATAASTGKPANRWRGAATQRPGGGRKAAAQSPLSWMSSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQIGALGAPDAVEEANALEEARAASSLTR 845

[Close]

BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Match: A0A6H5KVL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 6.920e-34
Identity = 119/343 (34.69%), Postives = 161/343 (46.94%), Query Frame = 1

Query:  514 GREERYPSAMTAAATS--------GGWLTSGKLGVSIEKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSSATIPTTTGPGGWLASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTGSKLPPWAKPWTPPPEPDV----TVDPVPPRDKDTKKQDIAVVVTPDWILASLGQGDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTSDWLLHTVVDGGGGVGGAKLKKPNQPS-----TSVAPDALSWMTKMKRRSSIDLEDPCVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAASSHSR 1491
            G+ +R P A   AA          GGWL+SGKLGVS E+++  +       D+G    TA +   PK   K +  A +P                            GDG      +++ ETQTE+DIE V ++G   KLPPWAKP+ PPP+ DV    T D      K  +K++      PDWILA+LG  D +       + G    G   +WL+   +    +     P    +N  DWL                  P Q S      +V    LSWM ++KRRSS+DL+DP VE  V + K KA PGGW+Q GALG+PD++ EE  LE+ARAAS  +R
Sbjct:  761 GQTKRKPHATATAAAKAAAVPAAPGGWLSSGKLGVSTEEENDQD-------DAGK---TAGRSTTPKKKKKQAIGA-VPVAXXXXXXXXXXXXXXXXXXXXXXXXGGGDGQ---PILVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVVPESTADSX--XXKTPEKEETDASAAPDWILAALGDQDADGFRGGVPASG----GGSKNWLSHAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPSAKPKDRQAASIPQQRSGIARKAAVPASPLSWMKQVKRRSSMDLDDPTVETTVAQAKAKAAPGGWLQIGALGAPDALAEENELEQARAASPRTR 1083

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FJS0_ECTSI	1.350e-106	30.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KKG6_9PHAE	1.870e-44	35.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVL2_9PHAE	6.920e-34	34.69	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]