mRNA_P-canaliculata_contig97892.23885.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig97892.23885.1 vs. uniprot
Match: A0A0Q7WAG5_9CAUL (FliH domain-containing protein n=4 Tax=Caulobacter TaxID=75 RepID=A0A0Q7WAG5_9CAUL) HSP 1 Score: 52.0 bits (123), Expect = 2.700e-5 Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 1 Query: 1 MSLVTLFNRDAGWLATDQRIFASDSLEDTLGVVELAAELSRLIDCQQAVIEQARREGFAAGLVQGADEARQAGRQTTAQALLALEHRYASAEAQQRDQVSQLAVEVVRRIAASVAPAEWLYAQASTAAGDLMDESRLVLRV 423
MS + L + + L TD I ED + + A ++ L D +QA + A EGFA G +GA +A + TA+ L + + + A+ R + LA+++VRRIAA +AP + L A A AA DL+ E + +RV
Sbjct: 1 MSYLLLASAPSAALLTDDPILRR---EDVARLTQAAEIVASLEDHRQAARDAAVAEGFAHGRTEGAAKAAR----ETAETLAGVHNALQAERARLRASSAALALDIVRRIAAGLAPEDVLAALAEQAARDLLPEEPIGVRV 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97892.23885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97892.23885.1 >prot_P-canaliculata_contig97892.23885.1 ID=prot_P-canaliculata_contig97892.23885.1|Name=mRNA_P-canaliculata_contig97892.23885.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp MSLVTLFNRDAGWLATDQRIFASDSLEDTLGVVELAAELSRLIDCQQAVIback to top mRNA from alignment at P-canaliculata_contig97892:41..472- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97892.23885.1 ID=mRNA_P-canaliculata_contig97892.23885.1|Name=mRNA_P-canaliculata_contig97892.23885.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=432bp|location=Sequence derived from alignment at P-canaliculata_contig97892:41..472- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97892:41..472- >mRNA_P-canaliculata_contig97892.23885.1 ID=mRNA_P-canaliculata_contig97892.23885.1|Name=mRNA_P-canaliculata_contig97892.23885.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at P-canaliculata_contig97892:41..472- (Pelvetia canaliculata dioecious)back to top |