mRNA_P-canaliculata_contig97669.23868.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig97669.23868.1
Unique NamemRNA_P-canaliculata_contig97669.23868.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: UPI00054E4C72 (glycerol-3-phosphate dehydrogenase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00054E4C72)

HSP 1 Score: 396 bits (1018), Expect = 6.000e-134
Identity = 192/267 (71.91%), Postives = 226/267 (84.64%), Query Frame = 1
Query:   10 EFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            ++DLLIIGGGINGTAIARDAAGRGL VLLCE+DDLANHTSSSSTKLIHGG RYLEY EF+LVR ALIEREVLLR+APHIIWP+RFVLPY+KG+RP W++R GLFLYD LGGRE LPGTKT+KL K  H+ +L+  L  GFEYSDCWVED+RLVVLNA+DAA +GAD+RTR EV S+E   +GY   I  NG +  + + G +NSAG  V+++L K+++ KN+  +RLVKGSHIVTKRLF+GDHAYIFQNAD RIIFAIPYE +YTLI
Sbjct:    3 DYDLLIIGGGINGTAIARDAAGRGLKVLLCERDDLANHTSSSSTKLIHGGLRYLEYYEFKLVRHALIEREVLLRAAPHIIWPMRFVLPYDKGLRPKWMLRAGLFLYDSLGGREKLPGTKTVKLNKPPHQGVLESRLTQGFEYSDCWVEDARLVVLNALDAANRGADIRTRTEVLSIEADGSGYKAEIKTNGTTATVTAKGCINSAGPWVDEVLKKIQRTKNDKSVRLVKGSHIVTKRLFEGDHAYIFQNADNRIIFAIPYERDYTLI 269          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: A0A8J3CUI6_9PROT (Glycerol-3-phosphate dehydrogenase n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CUI6_9PROT)

HSP 1 Score: 394 bits (1011), Expect = 5.690e-133
Identity = 195/268 (72.76%), Postives = 227/268 (84.70%), Query Frame = 1
Query:    7 NEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            N  DLLIIGGGINGTAIARDA+GRGLSV+LCEKDDLA HTSS+STKLIHGG RYLEY EFRLVREALIEREVLLR+APHIIWPLRFVLPY++G RPAW++RLGLFLYD+LGGRELLPGTKT+ L K  H  +L+  LKTGFEYSDCWVED+RLVVLNA+DA  +GAD+R   EV ++E  P GY  T+++      I + G+VN+AG  V+++L K+KK KNEA LRL+KGSHIVTKRLF GDHAY+FQNAD RIIFAIPYE ++TLI
Sbjct:    2 NICDLLIIGGGINGTAIARDASGRGLSVVLCEKDDLARHTSSASTKLIHGGLRYLEYYEFRLVREALIEREVLLRAAPHIIWPLRFVLPYDEGQRPAWMLRLGLFLYDNLGGRELLPGTKTVDLRKAPHNSVLEKRLKTGFEYSDCWVEDARLVVLNAVDAQNRGADIRVGTEVIAIEAHPAGYEATLSDGST---IITRGVVNAAGPWVDEVLFKIKKDKNEAGLRLIKGSHIVTKRLFPGDHAYMFQNADNRIIFAIPYERDFTLI 266          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: UPI001677926F (glycerol-3-phosphate dehydrogenase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001677926F)

HSP 1 Score: 384 bits (987), Expect = 2.870e-129
Identity = 185/267 (69.29%), Postives = 224/267 (83.90%), Query Frame = 1
Query:   10 EFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
             +DLLIIGGGINGTAIARDAAGRGLSVLLCE+DDLA+HTSS+STKLIHGG RYLEY EF LVR AL EREV+LR+APHIIWP+RFVLPY+KG+RPAW++R GLFLYDH+GGRE LPG+K+LKL K  HK +L+   KTGFEYSDCWVED+RLVVL A+DAA +GAD+RTR EV SV+ T  GY   I   G+++ + + G+VN+AG  V+++L  +K  + E  LRLV GSHIVTK+LF+GDHAY+FQNAD R+IFAIPYE ++TLI
Sbjct:    2 NYDLLIIGGGINGTAIARDAAGRGLSVLLCERDDLASHTSSASTKLIHGGLRYLEYYEFNLVRHALKEREVMLRAAPHIIWPMRFVLPYDKGLRPAWMLRTGLFLYDHIGGRETLPGSKSLKLDKAPHKGVLESRFKTGFEYSDCWVEDARLVVLYALDAANRGADIRTRTEVLSVKPTDEGYRAEIRHQGETQTVSAKGVVNAAGPWVDEVLGGIKTTQAEQSLRLVTGSHIVTKKLFEGDHAYLFQNADNRVIFAIPYERDFTLI 268          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: A0A848V4L1_9PROT (Glycerol-3-phosphate dehydrogenase n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V4L1_9PROT)

HSP 1 Score: 379 bits (973), Expect = 3.890e-127
Identity = 186/270 (68.89%), Postives = 226/270 (83.70%), Query Frame = 1
Query:    1 MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            M +++D+LI+GGGINGTAIARDA+GRGL+VLLCEKDDLA+HTSSSSTKLIHGG RYLEY EFRLVREALIEREVLLRSAPHIIWP+RFVLPY++G+RPAW++RLGLFLYD LGGR+ LPGTKT+KL K  H  +L+  L  GFEYSDCWVED+RLVVLNA+DA  +GAD++TRA V ++E +  GY   +      ++I +  IVN+AG  V++IL+ +K    E  +RLVKGSHIVTK+LF+GDHAYIFQN D RIIFAIPYE++YTLI
Sbjct:    1 MVDQYDMLIVGGGINGTAIARDASGRGLNVLLCEKDDLASHTSSSSTKLIHGGLRYLEYYEFRLVREALIEREVLLRSAPHIIWPMRFVLPYDEGLRPAWMLRLGLFLYDSLGGRKELPGTKTVKLDKAPHAGVLEERLVKGFEYSDCWVEDARLVVLNAIDAKNRGADIKTRAFVSNIERSEGGYRADVTGPDGVQKISARCIVNTAGPWVDEILMGMKGETEEKSVRLVKGSHIVTKKLFEGDHAYIFQNQDNRIIFAIPYEQDYTLI 270          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: UPI00167811FA (glycerol-3-phosphate dehydrogenase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167811FA)

HSP 1 Score: 378 bits (970), Expect = 1.470e-126
Identity = 186/270 (68.89%), Postives = 220/270 (81.48%), Query Frame = 1
Query:    1 MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            M + FDLLIIGGGINGTAIARDAAGRGLSV+LCE+DDLA+HTSS+STKLIHGG RYLEY EF LVR+AL EREVLLRSAPH+IWPLRF+LPY+KG+RPAWL+RLGLF+YDHLGGR++LP T T+ L     K  L+  L  GFEYSDCWVED+RLV LNA+DA E+GA +RT+  V++++    GY   + EN KS  I +  +VN+AG  VEDIL K+K  K+ A LRLVKGSHIVTK+LF GDH YIFQN+D RIIFAIPYE +YTLI
Sbjct:    1 MTSSFDLLIIGGGINGTAIARDAAGRGLSVVLCERDDLASHTSSASTKLIHGGLRYLEYFEFGLVRKALQEREVLLRSAPHVIWPLRFILPYDKGLRPAWLLRLGLFIYDHLGGRKILPATTTVNLQSGPFKGQLRSRLTKGFEYSDCWVEDARLVTLNAVDAHERGARIRTQTTVKTIKAMHDGYEAEVYENEKSSTIHAKAVVNAAGPWVEDILQKMKPGKSTAELRLVKGSHIVTKKLFDGDHCYIFQNSDDRIIFAIPYESDYTLI 270          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: A0A850GZ42_9SPHN (Glycerol-3-phosphate dehydrogenase n=1 Tax=Actirhodobacter atriluteus TaxID=2744473 RepID=A0A850GZ42_9SPHN)

HSP 1 Score: 360 bits (923), Expect = 1.420e-119
Identity = 171/270 (63.33%), Postives = 217/270 (80.37%), Query Frame = 1
Query:    1 MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            M  ++DLL+IGGGING  IARDAAGRGLSVLLCEKDDLA HTSSSSTKL+HGG RYLE+ EFRLVREALIEREVLL  APHIIWPLRFVLP+++G+RPAW++R GLFLYD+LGGR+LLPGT+++ L +  H+DIL+  LK GF YSDCWVEDSRLVVLNAMDA E+GAD+RTR EV S+    + +   + ++  ++++ +  +VN+AG  V+++L      K    LRLVKGSH++  RL+ G+HAYIFQN D R++FA+PYE +YTL+
Sbjct:    1 MAAQYDLLVIGGGINGAGIARDAAGRGLSVLLCEKDDLAQHTSSSSTKLVHGGLRYLEHYEFRLVREALIEREVLLGMAPHIIWPLRFVLPHDEGLRPAWMLRAGLFLYDNLGGRKLLPGTESVDLTRPPHRDILEDRLKRGFAYSDCWVEDSRLVVLNAMDARERGADIRTRTEVVSLTRGASSWTAVLQDSAGNQEVSARAVVNAAGPWVDNVLSSAIPGKEHRNLRLVKGSHLIVPRLYDGEHAYIFQNGDGRVLFAVPYEYDYTLL 270          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: A0A844Z8X7_9SPHN (Glycerol-3-phosphate dehydrogenase n=2 Tax=Pontixanthobacter TaxID=2792075 RepID=A0A844Z8X7_9SPHN)

HSP 1 Score: 348 bits (893), Expect = 6.150e-115
Identity = 171/267 (64.04%), Postives = 213/267 (79.78%), Query Frame = 1
Query:   13 FDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTI-NENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            +DLL+IGGGING  IARDAAGRG  VLLCEKDDLA+HTSS+STKL+HGG RYLE+ EFRLVRE+LIERE LL  APHIIWPLRFVLP++KG+RP+WL+RLGLFLYDH+GGR+LLP TKTL L    H D+L+  L  GFEYSDCWVED+RLVVLNAMDAA +GAD+RTR E  S++ +   ++  + +E+GK+++I +  +VN+AG  V+++L K    K    LRLVKGSH++  +LF  D AYIFQN D RI+FAIPYE  +TL+
Sbjct:    7 YDLLVIGGGINGVGIARDAAGRGAKVLLCEKDDLASHTSSASTKLVHGGLRYLEHYEFRLVRESLIERERLLGMAPHIIWPLRFVLPHDKGLRPSWLLRLGLFLYDHIGGRKLLPATKTLDLRAAPHGDVLEERLIKGFEYSDCWVEDARLVVLNAMDAARRGADIRTRTECVSLDRSGQVWLADLKDEHGKTQRISARTVVNAAGPWVDNVLGKAMPEKQHQNLRLVKGSHLIFPKLFDHDQAYIFQNKDDRIVFAIPYEREFTLV 273          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: A0A2E9HBT8_9SPHN (Glycerol-3-phosphate dehydrogenase n=1 Tax=Citromicrobium sp. TaxID=2024827 RepID=A0A2E9HBT8_9SPHN)

HSP 1 Score: 347 bits (891), Expect = 7.820e-115
Identity = 172/270 (63.70%), Postives = 209/270 (77.41%), Query Frame = 1
Query:    1 MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            M + +DLL+IGGGING  IARDAAGRGLSVLL EKDDLA HTSS+STKL+HGG RYLE+ EFRLVRE+L EREVLL  APHIIWPLRFVLP+  G+RPAWL+RLGLFLYDH+GGR+LLP TK + L +  H  ILKPSLK GFEYSDCWVEDSRLVVLNA+DA E+GAD+RTR E  ++E     +  T+ +     Q+Q+  + N+AG  V+++L +  +    A LRLVKGSH+V  +L+ G H YIFQN D RI FAIPYE+ +TL+
Sbjct:    1 MSDVYDLLVIGGGINGAGIARDAAGRGLSVLLVEKDDLAAHTSSASTKLVHGGLRYLEHYEFRLVRESLKEREVLLALAPHIIWPLRFVLPHHAGLRPAWLLRLGLFLYDHIGGRKLLPPTKGVDLREPPHAAILKPSLKRGFEYSDCWVEDSRLVVLNALDARERGADIRTRTECIALEREDALWRATLRDASGETQVQARAVANAAGPWVDEVLRRATRANAPAHLRLVKGSHLVVPKLWDGPHCYIFQNGDGRICFAIPYEQQFTLL 270          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: A0A2P0B2K4_9SPHN (Glycerol-3-phosphate dehydrogenase n=6 Tax=Sphingomonadales TaxID=204457 RepID=A0A2P0B2K4_9SPHN)

HSP 1 Score: 346 bits (888), Expect = 2.090e-114
Identity = 169/270 (62.59%), Postives = 206/270 (76.30%), Query Frame = 1
Query:    1 MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            M   FDLL+IGGGING  IARDAAGRGLSVLL EKDDLA HTSS+STKL+HGG RYLEY EFRLVRE+L EREVLLR+APHIIWP+RFVLP+  G+RPAW++RLGLFLYDH+GGR+LLP TK++ L +  H  ILKP LK GFEYSDCWVEDSRLVVLNA+DA E+GAD+RTR E   +      +  T+ +     Q+ +  + N+AG  V+ +L +       A LRLVKGSH++  +L+ G H YIFQN D RI FAIPYE+++TL+
Sbjct:    1 MSEPFDLLVIGGGINGAGIARDAAGRGLSVLLVEKDDLAAHTSSASTKLVHGGLRYLEYYEFRLVRESLQEREVLLRNAPHIIWPMRFVLPHHSGLRPAWMLRLGLFLYDHIGGRKLLPPTKSVNLREPPHASILKPFLKRGFEYSDCWVEDSRLVVLNAVDAKERGADIRTRTECTGLAREGDLWRATLRDGAGETQVSARMVANAAGPWVDQVLQRALHRNTPAHLRLVKGSHLIVPKLWDGAHCYIFQNGDGRICFAIPYEQDFTLL 270          
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Match: UPI001C9DC3C2 (glycerol-3-phosphate dehydrogenase n=1 Tax=Alteriqipengyuania sp. NZ-12B TaxID=2860200 RepID=UPI001C9DC3C2)

HSP 1 Score: 346 bits (887), Expect = 3.340e-114
Identity = 169/270 (62.59%), Postives = 206/270 (76.30%), Query Frame = 1
Query:    1 MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLIHGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAWLIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWVEDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQSSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIFQNADKRIIFAIPYEENYTLI 810
            M   FDLL+IGGGING  IARDAAGRGLSVLL EKDDLA HTSS+STKL+HGG RYLEY EFRLVRE+L EREVLLR+APHIIWP+RFVLP+  G+RPAWL+RLGLFLYDH+GGR+LLP TK++ L +  H  ILKP L+ GFEYSDCWVED+RLVVLNA+DA E+GAD+RTR E   +      +  T+N+     Q+ +  + N+AG  V+ +L +       A LRLVKGSH++  +L+ G H YIFQN D RI FAIPYE ++TL+
Sbjct:    1 MSEPFDLLVIGGGINGAGIARDAAGRGLSVLLVEKDDLAAHTSSASTKLVHGGLRYLEYYEFRLVRESLQEREVLLRNAPHIIWPMRFVLPHHSGLRPAWLLRLGLFLYDHIGGRKLLPPTKSVNLREPPHASILKPFLQRGFEYSDCWVEDARLVVLNALDAKERGADIRTRTECTGLAREGDLWRATLNDGAGETQVSARMVANAAGPWVDQLLQRALHRNTPAHLRLVKGSHLIVPKLWDGAHCYIFQNGDGRICFAIPYERDFTLL 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97669.23868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00054E4C726.000e-13471.91glycerol-3-phosphate dehydrogenase n=1 Tax=Hellea ... [more]
A0A8J3CUI6_9PROT5.690e-13372.76Glycerol-3-phosphate dehydrogenase n=1 Tax=Algimon... [more]
UPI001677926F2.870e-12969.29glycerol-3-phosphate dehydrogenase n=1 Tax=Litorim... [more]
A0A848V4L1_9PROT3.890e-12768.89Glycerol-3-phosphate dehydrogenase n=1 Tax=Hellea ... [more]
UPI00167811FA1.470e-12668.89glycerol-3-phosphate dehydrogenase n=1 Tax=Litorim... [more]
A0A850GZ42_9SPHN1.420e-11963.33Glycerol-3-phosphate dehydrogenase n=1 Tax=Actirho... [more]
A0A844Z8X7_9SPHN6.150e-11564.04Glycerol-3-phosphate dehydrogenase n=2 Tax=Pontixa... [more]
A0A2E9HBT8_9SPHN7.820e-11563.70Glycerol-3-phosphate dehydrogenase n=1 Tax=Citromi... [more]
A0A2P0B2K4_9SPHN2.090e-11462.59Glycerol-3-phosphate dehydrogenase n=6 Tax=Sphingo... [more]
UPI001C9DC3C23.340e-11462.59glycerol-3-phosphate dehydrogenase n=1 Tax=Alteriq... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97669contigP-canaliculata_contig97669:1..810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score400.6
Seed ortholog evalue5.8e-109
Seed eggNOG ortholog1121948.AUAC01000002_gene1658
Preferred nameglpD
KEGG rclassRC00029
KEGG koko:K00111
KEGG ReactionR00848
KEGG Pathwayko00564,ko01110,map00564,map01110
EggNOG free text desc.Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
EggNOG OGs1MUMY@1224,2TU11@28211,43WU7@69657,COG0578@1,COG0578@2
EC1.1.5.3
COG Functional cat.C
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size810
Cds size810
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817339.845074-CDS-P-canaliculata_contig97669:0..8101622817339.845074-CDS-P-canaliculata_contig97669:0..810Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97669 1..810 -
1693495233.3552768-CDS-P-canaliculata_contig97669:0..8101693495233.3552768-CDS-P-canaliculata_contig97669:0..810Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97669 1..810 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97669.23868.1prot_P-canaliculata_contig97669.23868.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig97669 1..810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig97669.23868.1

>prot_P-canaliculata_contig97669.23868.1 ID=prot_P-canaliculata_contig97669.23868.1|Name=mRNA_P-canaliculata_contig97669.23868.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=270bp
MKNEFDLLIIGGGINGTAIARDAAGRGLSVLLCEKDDLANHTSSSSTKLI
HGGFRYLEYLEFRLVREALIEREVLLRSAPHIIWPLRFVLPYEKGIRPAW
LIRLGLFLYDHLGGRELLPGTKTLKLAKTEHKDILKPSLKTGFEYSDCWV
EDSRLVVLNAMDAAEKGADVRTRAEVRSVETTPTGYVVTINENGKSEQIQ
SSGIVNSAGAAVEDILLKLKKHKNEARLRLVKGSHIVTKRLFKGDHAYIF
QNADKRIIFAIPYEENYTLI
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mRNA from alignment at P-canaliculata_contig97669:1..810-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig97669.23868.1 ID=mRNA_P-canaliculata_contig97669.23868.1|Name=mRNA_P-canaliculata_contig97669.23868.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=810bp|location=Sequence derived from alignment at P-canaliculata_contig97669:1..810- (Pelvetia canaliculata dioecious)
ATGAAGAACGAATTTGACCTATTGATTATCGGGGGCGGAATTAATGGAAC TGCAATCGCGCGAGATGCAGCTGGACGGGGTCTAAGCGTTCTGTTGTGCG AGAAAGACGACCTCGCCAATCATACCTCGTCATCGTCCACAAAACTAATA CATGGCGGATTTCGCTATCTCGAATATCTCGAATTTCGCCTTGTCCGGGA GGCCTTAATTGAGCGGGAAGTTCTACTGAGATCCGCGCCTCACATAATTT GGCCTCTTCGATTTGTCTTGCCATATGAAAAAGGGATAAGACCGGCATGG CTCATAAGGCTCGGATTATTTCTTTATGATCACTTGGGGGGGAGGGAGCT TCTGCCCGGCACAAAAACTCTCAAATTGGCGAAAACAGAACATAAAGATA TTCTCAAACCTAGCCTGAAAACCGGTTTTGAATATTCGGACTGTTGGGTT GAGGATTCCAGACTGGTTGTTTTGAACGCAATGGACGCGGCTGAAAAAGG GGCAGATGTTCGAACCCGCGCCGAGGTCCGGTCCGTTGAGACGACACCAA CCGGCTATGTCGTTACGATCAATGAGAATGGAAAATCTGAACAGATACAG TCTAGCGGGATTGTCAATTCAGCCGGGGCAGCTGTGGAAGACATTTTGCT CAAACTGAAAAAACACAAGAATGAGGCCAGACTCCGCTTGGTAAAAGGGA GCCACATCGTCACGAAACGGCTTTTCAAGGGCGACCACGCTTATATATTT CAAAATGCTGATAAGCGGATTATTTTCGCGATACCCTATGAGGAAAATTA TACCCTGATC
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Coding sequence (CDS) from alignment at P-canaliculata_contig97669:1..810-

>mRNA_P-canaliculata_contig97669.23868.1 ID=mRNA_P-canaliculata_contig97669.23868.1|Name=mRNA_P-canaliculata_contig97669.23868.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at P-canaliculata_contig97669:1..810- (Pelvetia canaliculata dioecious)
ATGAAGAACGAATTTGACCTATTGATTATCGGGGGCGGAATTAATGGAAC
TGCAATCGCGCGAGATGCAGCTGGACGGGGTCTAAGCGTTCTGTTGTGCG
AGAAAGACGACCTCGCCAATCATACCTCGTCATCGTCCACAAAACTAATA
CATGGCGGATTTCGCTATCTCGAATATCTCGAATTTCGCCTTGTCCGGGA
GGCCTTAATTGAGCGGGAAGTTCTACTGAGATCCGCGCCTCACATAATTT
GGCCTCTTCGATTTGTCTTGCCATATGAAAAAGGGATAAGACCGGCATGG
CTCATAAGGCTCGGATTATTTCTTTATGATCACTTGGGGGGGAGGGAGCT
TCTGCCCGGCACAAAAACTCTCAAATTGGCGAAAACAGAACATAAAGATA
TTCTCAAACCTAGCCTGAAAACCGGTTTTGAATATTCGGACTGTTGGGTT
GAGGATTCCAGACTGGTTGTTTTGAACGCAATGGACGCGGCTGAAAAAGG
GGCAGATGTTCGAACCCGCGCCGAGGTCCGGTCCGTTGAGACGACACCAA
CCGGCTATGTCGTTACGATCAATGAGAATGGAAAATCTGAACAGATACAG
TCTAGCGGGATTGTCAATTCAGCCGGGGCAGCTGTGGAAGACATTTTGCT
CAAACTGAAAAAACACAAGAATGAGGCCAGACTCCGCTTGGTAAAAGGGA
GCCACATCGTCACGAAACGGCTTTTCAAGGGCGACCACGCTTATATATTT
CAAAATGCTGATAAGCGGATTATTTTCGCGATACCCTATGAGGAAAATTA
TACCCTGATCATGAAGAACGAATTTGACCTATTGATTATCGGGGGCGGAA
TTAATGGAACTGCAATCGCGCGAGATGCAGCTGGACGGGGTCTAAGCGTT
CTGTTGTGCGAGAAAGACGACCTCGCCAATCATACCTCGTCATCGTCCAC
AAAACTAATACATGGCGGATTTCGCTATCTCGAATATCTCGAATTTCGCC
TTGTCCGGGAGGCCTTAATTGAGCGGGAAGTTCTACTGAGATCCGCGCCT
CACATAATTTGGCCTCTTCGATTTGTCTTGCCATATGAAAAAGGGATAAG
ACCGGCATGGCTCATAAGGCTCGGATTATTTCTTTATGATCACTTGGGGG
GGAGGGAGCTTCTGCCCGGCACAAAAACTCTCAAATTGGCGAAAACAGAA
CATAAAGATATTCTCAAACCTAGCCTGAAAACCGGTTTTGAATATTCGGA
CTGTTGGGTTGAGGATTCCAGACTGGTTGTTTTGAACGCAATGGACGCGG
CTGAAAAAGGGGCAGATGTTCGAACCCGCGCCGAGGTCCGGTCCGTTGAG
ACGACACCAACCGGCTATGTCGTTACGATCAATGAGAATGGAAAATCTGA
ACAGATACAGTCTAGCGGGATTGTCAATTCAGCCGGGGCAGCTGTGGAAG
ACATTTTGCTCAAACTGAAAAAACACAAGAATGAGGCCAGACTCCGCTTG
GTAAAAGGGAGCCACATCGTCACGAAACGGCTTTTCAAGGGCGACCACGC
TTATATATTTCAAAATGCTGATAAGCGGATTATTTTCGCGATACCCTATG
AGGAAAATTATACCCTGATC
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