Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 492 |
| Cds size | 483 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.7603376-UTR-P-canaliculata_contig9766:6738..6747 | 1622817339.7603376-UTR-P-canaliculata_contig9766:6738..6747 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9766 6739..6747 + |
| 1693495233.306303-UTR-P-canaliculata_contig9766:6738..6747 | 1693495233.306303-UTR-P-canaliculata_contig9766:6738..6747 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9766 6739..6747 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.7713108-CDS-P-canaliculata_contig9766:6747..6829 | 1622817339.7713108-CDS-P-canaliculata_contig9766:6747..6829 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9766 6748..6829 + |
| 1693495233.3155975-CDS-P-canaliculata_contig9766:6747..6829 | 1693495233.3155975-CDS-P-canaliculata_contig9766:6747..6829 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9766 6748..6829 + |
| 1622817339.7821765-CDS-P-canaliculata_contig9766:10514..10915 | 1622817339.7821765-CDS-P-canaliculata_contig9766:10514..10915 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9766 10515..10915 + |
| 1693495233.3295126-CDS-P-canaliculata_contig9766:10514..10915 | 1693495233.3295126-CDS-P-canaliculata_contig9766:10514..10915 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9766 10515..10915 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9766.23866.1 >prot_P-canaliculata_contig9766.23866.1 ID=prot_P-canaliculata_contig9766.23866.1|Name=mRNA_P-canaliculata_contig9766.23866.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=161bp
MQAAAAEADRDRVEREMQKLAQAHEGRAEKEVRWKRDADSTTSAASMTAP
EQGQSHAHDHPSGVQVKTAVEVQEVGKAQAVDQAQTADQSKATDKTQVTA
QGHNAIQVRAEDQAQTIKYAQAIDHALAIEKAQAAAQIQAAAQAQATAQA
QAAKAQAAAQA back to topmRNA from alignment at P-canaliculata_contig9766:6739..10915+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9766.23866.1 ID=mRNA_P-canaliculata_contig9766.23866.1|Name=mRNA_P-canaliculata_contig9766.23866.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=4177bp|location=Sequence derived from alignment at P-canaliculata_contig9766:6739..10915+ (Pelvetia canaliculata dioecious)
GATGCCAAAATGCAAGCAGCCGCTGCCGAGGCGGACAGAGATCGCGTTGA
GCGGGAGATGCAGAAGTTGGCGCAAGCGCACGAGGGTCGCGGTGAGCATC
ATATACCTTCTAAGACATTCATTAAAACACTCTCACCTAGACACGAGATG
AACACAAGCACACACAGACGCGGAGCCGGCGGGCATCATGTTGCCTAGGA
TTAGCGCGTACACCTCAGGACGGGCCATCTCATGTTCCAAAAGGGTACAC
AGGACATGAAATATGCAGATCGTCGGGGCACTTTGGAGCACAGCTCGAAG
GCCGAATCCGGACGGGCTATAATCGAATCTCACTACGCGTTTTATTTTTT
CCGTGCGCCGCACGGGAAACTGTGAGTATTACAGTAGTGCCAGCATAAAA
AAACAGAATTTTTGCGCACAAAGTTGGCGGGAAAGAAGGCCGTTCATACA
GGAAAAATGTCCGGCCCAAAACCGTACTGAGGAGCCTATACTTTATTATG
TTGCACCAGCACACTAAGGATGTGTTTGTTCTAAACAATGTATAAATAGT
GTTCCTAGACGAAAGAGGAACACACCACAAAATTTCGCTTAGCGATCAGC
CCTCTCGGTCACGAGAACGAAGCGTAGTCGTGGATGGTCCTCCAAGCGAC
TTGATTTCACGGTATTTCCAACGTCCTTCGCTTACGATCTAGATACCGAA
CCGAGCAGCAACGATACCAGAGCCGGACTTGGCGGAAAATGGACCAGAGG
AGTGTCTGCACAAAGTCTATTTCCTATATTGCGCCGCGTATTTGAGCAGG
AACTGTCACCGCTTGGTAGAACCAACAAGCTCGAACGGGGATACGGTCTT
TGTGTCCCCGCTTGTGGTACTTCAATTTTGAACGTCAACAGCTCGCCATG
AGATACTTCTTTTGTCGCTGTACAGCAAGGAGCTGAAGGGTACGGTGTGG
GGCCTCGATCTACGCCGTATCGGTAGTCGATGGGGACCTCTGAGTCGGCT
TTGCTCTGAAAGAATTATGTGCCCCGAGATACCACCCGTAATCCAAAAGC
CGAAGGTCCTACCGAAGTACCCCAGTTTGAGTCGCCACAGGAAATGACAA
ATGAGCGCCCGGGGACCACTTTTGCCAGTATCTGCTCTCTCCGGCCATGG
TAGGTCACTTAAAAGTGTCTGTGCACTGCTGTGTTTGCTCTGACGAGTGT
GCCGCCCGCGTGAATGAAGGTATTACCACAAGTCGAACAACAATAATCAC
GTGGCGTTTGATATTGAAAATAATACGTTTCATGCTGTCTCAATTTGTAA
AATGCATGTACACAAGTAATTTTTTATATGTATATAGGTATACTTTTAAG
TCATGGTTACAGGTGAAATGAGGTTAAAGTATACTTTAATACATATAAAA
TATACTCGTACATGCGTTTTACAAATCGTGATTGCGTGAAACGTATTATT
TTCAGTATTAAACGCCACGTGGTTTTTGTTCTTCAACTTGTGGTAACACC
TTCATTCATGCGTGCGGCACACTCGTCAGGGCAGACACAGCAGCGCACAG
ACACTTTTAAGCGACCTAGCATGGCCAGAGAGAGCAGATACTGGCAAAAG
TGGTCCCCGGGCGCTCATTTGTCATTTCCTGTGGCGACTCAAACTGGGGT
ACTTCGGTAGGACCTTCGGCTTTTGGATTACGGATGGTATCTCGGGGCAC
ATAATTCTTTCAGAGCAAAGCCGACTCAGAGGTCCTCTTCGACTGCCGAT
ACGGCGTAGATCGACGCCCCACACCGTACCCTTCAGCTCCTTGCTGTACA
GCGACAAAAGAAGTATCTCATGGCGAGCTGTTGACGCTCAAACCTGAAGT
AGCACAAGCGGGGACACAAAGGCCGTATCCCCGTTCGAGCTTGTTGGTTT
TTACCAAGCGGTGACAGTTCCTGCTCAAATACGCGGCGCAATATAGGAAA
TAGACTTTGTGCAGACACTCCTCTGGTCCATTTTCCGCCAAGTCCGGCTC
TGGTATCGTTGCTGCTCGGTCCGTTATCTAGATCGTAAGCGAAGGACGTT
GGAAATGCCGTGAAATCAAGCCGCTTGGAGGACCATCCACGACTATGCTT
CGTTCTCGTGACCGAGAGGGCTGATCGCTAAGCGGATTTTTGTGGTGTGT
TCCTCTTTTGTTTGGGTGTACTGTGATGTCTGTTTTGTATTAATATGGAA
GAGTGTTTTGTATTTTTTTAAACACTAAAGATGGAGCTAGAAGAACATCA
AAAGTCGGGTTTTTTGGACCATTTTTTGGTGGCGTTTTAAGGGCAAAATT
TTCCGGATTTACTCATTTTTTGATGCTGGCACTACTGTAGTAGTACTCTG
CTTTGCGTTTGGTGGTCGACGGCGGAATAACGAGGGTAAATACCAAACCT
TAAAATATATTTTTGACGCATTTTGTGGAATCACCGCTCGAAAATTTCCA
CGCGAGCCTCGCTGATGATGAGAACGTTTTGCTAATCCGTTTTACCACAA
TGACCTAAGTTTCGGCCCGTCATCTCTTGTTTCTACTATCTCAAGAGTAC
TGTACTTGATACGGTAATTCACTATTTAATAGCCACCCCCCGTACGCGGT
TTAAAGTCTGATAACGATTTCGCCGGTAAATACACAACGCCGGAAAAAAG
GTAACGCTACGGATTGTGAAAATCTTTGCGAGCCATATTGTTTGCGACGA
TGTCATGGCAGGCAAGGGCATGGCACACGCCCTTACGTAAAATATGTCGA
CTTATGTAAGGGACCTATGTCCCCTGTAAATATTCTCAGCAATAACCGAG
GGGTAGTTAGTATACCTACGGTATAGCGATGTCAGGGCATGGCCCAGGAA
ACTCTTGGAGGAGATAAAATAAACTGGCCGTGTCTGGTTATGGCTACGCG
CTTTTTTTGGAAGTGGTGAGAGGGGGTTTCCCCACCCGTCGCGTGTTTTG
CTCATTAAAAAAAAAAACCAATTCACGAGGGATCCAACAGTAGGAGCTTG
CATCATCGGCGAAAAAAATCAGGTTAGAGGATACCTGAAATGGTAAGGCG
CGTTCTACAAACCTTCACCTGTGAATCAAGAGAGTAAGTGGGATTGACTT
TTCTGGAGCTCGTTGTAGACCAGCCGATCGCCCATGTGTTGTACGTTTCT
GAGCCATCTGGGGAAGATATTTCCTTCGCCCATCCCCCCTCGTTTTTGTT
TGGAGTAAGTTGCTACACAGACCACACTGCTCGTACAAGTATTTACCTTC
ATTTGCCCCGAAAAGCTTTTGAGATCTTGCCAATCCCACATATTTCACAA
GAGCTACTGTCGGAGCCTGAAAGGCATGGTCTGTTGATGAGAGACTCGCT
AGGACTTTCTGTCCAGTGTTTTACCATGCCCATTTCTTTTTAGGTGTTTG
AATGGCCGACAGTCTTCTTCATACGTAATGCCCAGCGAAGCGAAGCCATT
TGTCTTCGAGTACCGAAGAGGTTTTTGGTTGGCTTTTTTCTTTTGTGTTT
TTTGCGCGTTGCAGGTGCTTGTTAGTGGCATTTTTTTTTTCTGCTCCGCC
TGAGTTCGAGAAACAGGCTAATCTACTCACGTAAAGCCAAAACGACAGAC
GAGATTAGGAGTGGACTGTTGTATCCTTGTTAAAAGATGACTCGTAGTGC
CTTTGGATGTGAGAGAAAGTGTCGCACCTCGAAAAGTGGCACGTGTCGCC
CCACTTGCTCGCTATTTTCCCATGTCTCAGGCTTTTTTTTCTCTCATCTG
TTGTGAACTGCCGCCTTTTGTGCCAGCCGAGAAAGAAGTGAGATGGAAGC
GCGACGCGGATTCGACCACTTCAGCTGCCTCGATGACCGCTCCAGAGCAG
GGCCAATCGCATGCTCACGATCATCCATCGGGCGTTCAGGTTAAGACCGC
TGTTGAAGTTCAAGAGGTCGGTAAGGCTCAAGCTGTCGACCAAGCTCAGA
CCGCCGACCAGTCTAAGGCTACCGACAAGACCCAGGTCACCGCCCAGGGT
CATAATGCAATCCAGGTTCGGGCAGAAGATCAGGCGCAGACCATCAAATA
TGCTCAGGCCATCGACCATGCCCTGGCCATCGAAAAGGCCCAGGCCGCCG
CTCAGATCCAGGCCGCCGCCCAGGCTCAGGCCACCGCTCAGGCCCAGGCC
GCCAAAGCTCAGGCTGCTGCTCAGGCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9766:6739..10915+ >mRNA_P-canaliculata_contig9766.23866.1 ID=mRNA_P-canaliculata_contig9766.23866.1|Name=mRNA_P-canaliculata_contig9766.23866.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at P-canaliculata_contig9766:6739..10915+ (Pelvetia canaliculata dioecious)
ATGCAAGCAGCCGCTGCCGAGGCGGACAGAGATCGCGTTGAGCGGGAGAT
GCAGAAGTTGGCGCAAGCGCACGAGGGTCGCGATGCAAGCAGCCGCTGCC
GAGGCGGACAGAGATCGCGTTGAGCGGGAGATGCAGAAGTTGGCGCAAGC
GCACGAGGGTCGCGCCGAGAAAGAAGTGAGATGGAAGCGCGACGCGGATT
CGACCACTTCAGCTGCCTCGATGACCGCTCCAGAGCAGGGCCAATCGCAT
GCTCACGATCATCCATCGGGCGTTCAGGTTAAGACCGCTGTTGAAGTTCA
AGAGGTCGGTAAGGCTCAAGCTGTCGACCAAGCTCAGACCGCCGACCAGT
CTAAGGCTACCGACAAGACCCAGGTCACCGCCCAGGGTCATAATGCAATC
CAGGTTCGGGCAGAAGATCAGGCGCAGACCATCAAATATGCTCAGGCCAT
CGACCATGCCCTGGCCATCGAAAAGGCCCAGGCCGCCGCTCAGATCCAGG
CCGCCGCCCAGGCTCAGGCCACCGCTCAGGCCCAGGCCGCCAAAGCTCAG
GCTGCTGCTCAGGCCCCGAGAAAGAAGTGAGATGGAAGCGCGACGCGGAT
TCGACCACTTCAGCTGCCTCGATGACCGCTCCAGAGCAGGGCCAATCGCA
TGCTCACGATCATCCATCGGGCGTTCAGGTTAAGACCGCTGTTGAAGTTC
AAGAGGTCGGTAAGGCTCAAGCTGTCGACCAAGCTCAGACCGCCGACCAG
TCTAAGGCTACCGACAAGACCCAGGTCACCGCCCAGGGTCATAATGCAAT
CCAGGTTCGGGCAGAAGATCAGGCGCAGACCATCAAATATGCTCAGGCCA
TCGACCATGCCCTGGCCATCGAAAAGGCCCAGGCCGCCGCTCAGATCCAG
GCCGCCGCCCAGGCTCAGGCCACCGCTCAGGCCCAGGCCGCCAAAGCTCA
GGCTGCTGCTCAGGCC back to top
|