Homology
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
D7FTG7_ECTSI (Aluminium resistance family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG7_ECTSI)
HSP 1 Score: 91.7 bits (226), Expect = 2.840e-20
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1
Query: 19 TLGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
TL R+LD FREFRVG+ FAGVDGYGHGD+GRETLDK+YARLFGAEAALVR
Sbjct: 124 TLRRVLDTFREFRVGSNVFAGVDGYGHGDIGRETLDKVYARLFGAEAALVR 174
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A7S3UV66_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV66_HETAK)
HSP 1 Score: 78.2 bits (191), Expect = 2.190e-16
Identity = 34/48 (70.83%), Postives = 45/48 (93.75%), Query Frame = 1
Query: 28 RILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
+ILDAF+E +VG+ FAGVDGYGHGD+GR+TLD+++A++FGAEAALVR
Sbjct: 108 KILDAFKEAKVGSNMFAGVDGYGHGDIGRDTLDEVFAKIFGAEAALVR 155
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
L1I8U7_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I8U7_GUITC)
HSP 1 Score: 78.2 bits (191), Expect = 1.550e-15
Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 1
Query: 28 RILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
RILDA+RE RVG FAG DGYGHGD+GR+TLD+IYA+LFGAE ALVR
Sbjct: 41 RILDAYREARVGPHLFAGTDGYGHGDIGRDTLDEIYAKLFGAEKALVR 88
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A7S4C015_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C015_CHRCT)
HSP 1 Score: 73.6 bits (179), Expect = 1.140e-14
Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 22 LGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
L R+L AFRE +VG FAGVDGYG GD+GRETLD IYA+LFGAEAA VR
Sbjct: 94 LRRVLKAFREEQVGAHHFAGVDGYGKGDIGRETLDAIYAKLFGAEAAFVR 143
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A835ZAS5_9STRA (Aluminum resistance protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS5_9STRA)
HSP 1 Score: 75.1 bits (183), Expect = 2.040e-14
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 16 STLGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
S L R+LD FR +VG+ FAGVDGYGHGD+GR+TLD +YA L GAEAALVR
Sbjct: 90 SMLRRVLDTFRCHQVGSSMFAGVDGYGHGDIGRDTLDAVYAELLGAEAALVR 141
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A0H3KA14_SYNP6 (Aluminum resistance protein homolog n=3 Tax=Synechococcus elongatus TaxID=32046 RepID=A0A0H3KA14_SYNP6)
HSP 1 Score: 74.7 bits (182), Expect = 2.560e-14
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query: 22 LGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
LGR+L+AFR RVG FAGV GYGH D+GRETLD++YAR+FGAEAA VR
Sbjct: 31 LGRVLEAFRAERVGVHHFAGVSGYGHDDLGRETLDRLYARVFGAEAAAVR 80
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A357B3P0_9FIRM (Uncharacterized protein n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A357B3P0_9FIRM)
HSP 1 Score: 73.9 bits (180), Expect = 4.870e-14
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 1 RVVGDSTLGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
RV G +TL R++DAF E+RV FAG GYG+ D+GRETLDKIYAR+FGA +ALVR
Sbjct: 30 RVSGQNTL-RVMDAFHEYRVSDACFAGTTGYGYDDLGRETLDKIYARVFGASSALVR 85
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A8J6CF73_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF73_DIALT)
HSP 1 Score: 73.9 bits (180), Expect = 5.180e-14
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 28 RILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
R+LDAFR +V + F GVDGYGHGD+GRE LD IYA LFGAEAALVR
Sbjct: 55 RVLDAFRNAQVSSSDFGGVDGYGHGDIGREKLDAIYAELFGAEAALVR 102
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
A0A6P0XF74_9CYAN (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XF74_9CYAN)
HSP 1 Score: 72.8 bits (177), Expect = 8.030e-14
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 22 LGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
L R++DAFRE RVG FAGV GYGH D+GRETLDK++AR+ GAEAA VR
Sbjct: 29 LRRVIDAFREHRVGVHHFAGVTGYGHDDLGRETLDKVFARVMGAEAAAVR 78
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Match:
M1UNC2_CYAM1 (Aluminum resistance protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UNC2_CYAM1)
HSP 1 Score: 72.8 bits (177), Expect = 1.340e-13
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 22 LGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFGAEAALVR 171
LGRIL FR R+GT FA ++GYGHGD+GR+TLD IYA LFG EAALVR
Sbjct: 140 LGRILQTFRAHRLGTHHFASINGYGHGDIGRDTLDAIYADLFGTEAALVR 189
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97616.23861.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.84e-20 / Id = 84.31 Expect = 2.19e-16 / Id = 70.83 Expect = 1.55e-15 / Id = 77.08 Expect = 1.14e-14 / Id = 74.00 Expect = 2.04e-14 / Id = 69.23 Expect = 2.56e-14 / Id = 72.00 Expect = 4.87e-14 / Id = 64.91 Expect = 5.18e-14 / Id = 72.92 Expect = 8.03e-14 / Id = 70.00 Expect = 1.34e-13 / Id = 70.00 Sequence D7FTG7_ECTSI A0A7S3UV66_HETAK L1I8U7_GUITC A0A7S4C015_CHRCT A0A835ZAS5_9STRA A0A0H3KA14_SYNP6 A0A357B3P0_9FIRM A0A8J6CF73_DIALT A0A6P0XF74_9CYAN M1UNC2_CYAM1
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97616.23861.1
>prot_P-canaliculata_contig97616.23861.1 ID=prot_P-canaliculata_contig97616.23861.1|Name=mRNA_P-canaliculata_contig97616.23861.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=57bp
RVVGDSTLGRILDAFREFRVGTGTFAGVDGYGHGDVGRETLDKIYARLFG AEAALVR back to top mRNA from alignment at P-canaliculata_contig97616:416..586-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig97616.23861.1 ID=mRNA_P-canaliculata_contig97616.23861.1|Name=mRNA_P-canaliculata_contig97616.23861.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=171bp|location=Sequence derived from alignment at P-canaliculata_contig97616:416..586- (Pelvetia canaliculata dioecious)CGTGTGGTTGGCGACAGCACGCTAGGGCGAATCCTTGACGCGTTTCGAGA
GTTTCGGGTGGGCACAGGCACCTTCGCCGGAGTTGACGGTTACGGCCACG
GCGACGTGGGTAGGGAGACACTCGACAAGATCTACGCTCGACTCTTCGGC
GCGGAGGCTGCCCTTGTGAGA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97616:416..586-
>mRNA_P-canaliculata_contig97616.23861.1 ID=mRNA_P-canaliculata_contig97616.23861.1|Name=mRNA_P-canaliculata_contig97616.23861.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=342bp|location=Sequence derived from alignment at P-canaliculata_contig97616:416..586- (Pelvetia canaliculata dioecious) CGTGTGGTTGGCGACAGCACGCTAGGGCGAATCCTTGACGCGTTTCGAGA GTTTCGGGTGGGCACAGGCACCTTCGCCGGAGTTGACGGTTACGGCCACG GCGACGTGGGTAGGGAGACACTCGACAAGATCTACGCTCGACTCTTCGGC GCGGAGGCTGCCCTTGTGAGACGTGTGGTTGGCGACAGCACGCTAGGGCG AATCCTTGACGCGTTTCGAGAGTTTCGGGTGGGCACAGGCACCTTCGCCG GAGTTGACGGTTACGGCCACGGCGACGTGGGTAGGGAGACACTCGACAAG ATCTACGCTCGACTCTTCGGCGCGGAGGCTGCCCTTGTGAGA back to top