mRNA_P-canaliculata_contig9761.23860.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9761.23860.1
Unique NamemRNA_P-canaliculata_contig9761.23860.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: D8LRL2_ECTSI (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL2_ECTSI)

HSP 1 Score: 443 bits (1140), Expect = 6.710e-149
Identity = 261/448 (58.26%), Postives = 294/448 (65.62%), Query Frame = 1
Query:    7 RSLATVYLGLGSNVGDKSANLLRACKGLSELGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGLVTKETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLL---------------------KKILSPKDQASGIGG-RRVLPMGADSGG-TRLWPLEAAGSRTFVMGILNATPDSFSDGGLY----SDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGE------------GGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            RSLATVYLGLGSNVGD+ ANLLRA KGL E G+VDATS LYET PMYVEDQP FLNAACRLST LGPA LLER+K LEA++GR    RWGPRAVD+DIL YD LV      G                     +  RWL+IPHP MHERPFVLLPLADI P+L HP+L STVK+LL                     K +     +++G GG  RVLPMG  S G TRLWP+E   SRT+VMGILNATPDSFSDGG +        TAVEH L M RDGAD++DIGGESTR                     PGAAEV  E E+SRVVPV+E +R A  A GE            G VTI+VDTRRAAVAEAAVAAGA  VNDVSGG FDP MLA VA+ GVPL+MMH RGTPQTMT+LTDYGG+VV +V  +L+ C+ AA+  GVPR
Sbjct:   58 RSLATVYLGLGSNVGDRHANLLRAFKGLREFGEVDATSLLYETPPMYVEDQPWFLNAACRLSTDLGPAVLLERLKVLEAAVGRKDTARWGPRAVDVDILLYDDLVL---DGGDXXXXXXXXXXXXXXXXXXXXQSKRWLRIPHPRMHERPFVLLPLADIQPDLAHPVLRSTVKELLSGLGLSAGVGNRTLSAAAAGAKGVEGQAGESAGAGGAERVLPMGVCSNGHTRLWPMEGRRSRTYVMGILNATPDSFSDGGQHYRRGGGVATAVEHGLKMARDGADVLDIGGESTR---------------------PGAAEVSPEEEISRVVPVIEGIRDAATAGGEAAAGEGDDADTIGPVTITVDTRRAAVAEAAVAAGADAVNDVSGGTFDPQMLATVARTGVPLMMMHMRGTPQTMTSLTDYGGNVVGEVSQSLEACSRAADIAGVPR 481          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: A0A835YYJ5_9STRA (Dihydropteroate synthase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ5_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.550e-96
Identity = 215/441 (48.75%), Postives = 248/441 (56.24%), Query Frame = 1
Query:    1 SRRSLATVYLGLGSNVGDKSANLLRACKGLSE--LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGLVTKETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGR--RVLPMG---ADSGG-------------------TRLWPLEAAGSRTFVMGILNATPDSFSDGGLY--SDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVT--ISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            S R L T Y+ LGSNVGD+  NLLRA + L    +G V  TS LY+T P YV DQP FLNAA RL T L PA LL  +K +E  IGR    RWGPR VD+DIL Y  +  ++ S+   G G D A    + +   S   H  LQ+PHP MHER FVL PLADIA    HP L  +V+++L  +   +  A G G    RVLP+G     SGG                   T LW ++     T VMGILN TPDSFSDGG Y       AV HA  M  DGADI+DIGGESTR                     PGA +V E +E+ RVVPVV  LR A       GVT  ISVDTRRAAVA  AV AGA LVNDVSGG  D  MLA VA+ GVP V MH RGTP+TMT +TDY  DVV  V  AL   +  AE+ GVPR
Sbjct:   12 SSRQLCTAYIALGSNVGDRHGNLLRAYRELRSRGIGNVVTTSGLYQTKPQYVADQPMFLNAALRLDTSLPPALLLRALKDVERDIGRVEGQRWGPRVVDLDILLYGDVQLEDDSE--PGRGADTAVPP-SPDPPASPLSH--LQVPHPRMHEREFVLRPLADIAATARHPALALSVEEMLSNV---RRAAGGXGDDVVRVLPLGPPRGSSGGXXXXXXXXXXXXXXXXXXDTPLWDMDGP---TRVMGILNVTPDSFSDGGRYYGGGVEAAVAHARAMAADGADIIDIGGESTR---------------------PGADDVEEAIELERVVPVVAALRAA-------GVTTPISVDTRRAAVARGAVRAGADLVNDVSGGAHDGAMLAAVAELGVPYVAMHMRGTPKTMTAMTDYA-DVVGDVTQALSAASARAEAAGVPR 412          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: A0A6H5JQ34_9PHAE (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ34_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 5.660e-94
Identity = 176/317 (55.52%), Postives = 208/317 (65.62%), Query Frame = 1
Query:  415 RWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLL---------------------KKILSPKDQASGIGG-RRVLPMGADSGG-TRLWPLEAAGSRTFVMGILNATPDSFSDGGLY----SDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGE------------------GGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVP 1230
            RWL+IPHP MHERPFVLLPLADI P+L HP+L STVK+LL                     K +     +++G GG  RVLPMG  S G TRLWP+E   SRT+VMGILNATPDSFSDGG +        TAVEHAL M+RDGAD++DIGGESTR+ +               +  PGAAEV  E E+SRVVPV++ +R A  A GE                  G VTI+VDTRRAAVAEAA+AAGA  VNDVSGG FDP MLA VA+AGVPLVMMH RGTPQTMT+LTDYGG++V +V  +L+ C+ AA+  GVP
Sbjct:   28 RWLRIPHPRMHERPFVLLPLADIKPDLAHPVLRSTVKELLSGLGLSAGVGNTTLSAAAAGAKGVEGQAGESAGAGGAERVLPMGVCSNGHTRLWPMEGRRSRTYVMGILNATPDSFSDGGQHYRREGGVATAVEHALQMLRDGADMLDIGGESTRQAK--------------RLALPGAAEVSPEEEISRVVPVIQGIRAAATAGGEAAAGEGDDCXXXXXXATIGPVTITVDTRRAAVAEAALAAGADAVNDVSGGTFDPRMLATVARAGVPLVMMHMRGTPQTMTSLTDYGGNIVGEVSYSLEACSRAADISGVP 330          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: G5AC99_PHYSP (Pterin-binding domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G5AC99_PHYSP)

HSP 1 Score: 281 bits (719), Expect = 2.890e-87
Identity = 178/408 (43.63%), Postives = 232/408 (56.86%), Query Frame = 1
Query:   16 ATVYLGLGSNVGDKSANLLRACKGLSE-LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGL-VTKETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            A VY  LG+N+GDK ANL  A   LS  +G V+ATS LY TAP YVEDQP FLN   RL T L PA+LL   K++E  IGR  ++RWGPR +D+DIL YD   +  +T+ G                          L +PH  + ER FVL PL D+APEL+HP+LG +++ L  ++ + + +   +    +LP    +     W   A GS+TFVMGI+N TPDSFSDG        AV+ AL M R G DI+DIGGES+R                     PGA  V +E E+ RV+PV+  +R       +  V IS+DT +A VA  A+ AGA++VND+S G  DPDM A VAK  VP+V+MH RGTPQTMT L +Y  DVV +V   L +   AAE+ G+ R
Sbjct:    5 ARVYAALGTNLGDKVANLEHALAMLSATVGPVEATSRLYATAPQYVEDQPVFLNLVARLHTTLAPAELLGAFKAIERDIGRTPSLRWGPRLIDVDILLYDDQQLAVDTADGP-------------------------LIVPHERIIERDFVLAPLCDLAPELLHPVLGQSMRTLYDRLQAGEQRY--VAPVPMLPAHKAAP----W---AVGSKTFVMGIVNVTPDSFSDGAELDTATAAVQKALEMERAGVDIIDIGGESSR---------------------PGAKPVTQEEELQRVLPVIRGIRE------QSEVAISIDTTKAEVARQAIEAGANIVNDISAGLKDPDMFATVAKLRVPIVLMHMRGTPQTMTGLKEYD-DVVTEVEEVLKERVAAAEAAGIFR 350          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: D0N9I9_PHYIT (Folic acid synthesis protein fol1, putative n=16 Tax=Phytophthora TaxID=4783 RepID=D0N9I9_PHYIT)

HSP 1 Score: 281 bits (718), Expect = 4.070e-87
Identity = 174/408 (42.65%), Postives = 238/408 (58.33%), Query Frame = 1
Query:   16 ATVYLGLGSNVGDKSANLLRACKGLSE-LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGLVTK-ETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            A VY  LG+N+GDK ANL  A   L++ +G V+ATS LY TAP YVEDQP FLN   RL T L P +LL   K++E  IGR  ++RWGPR +D+DIL YD LV K +T +G                          L +PH  + ER FVL PL D+AP+L+HP+L  +++ L   + + + +   +    +LP+  ++     W L   GS+TFVMGI+N TPDSFSDG        AV+ AL M R G DI+DIGGES+R                     PGA  V ++ E+SRV+PV+  +R       +  ++IS+DT +A VA  A+ AGA++VND+S G  D +MLA VAK  VP+V+MH RGTP+TMT L +Y  DVV +V + L++   AAE+ G+ R
Sbjct:    5 ARVYAALGTNLGDKVANLENALAMLTQTVGPVEATSRLYTTAPQYVEDQPAFLNIVARLRTHLKPKELLGAFKTIEREIGRTPSLRWGPRLIDVDILLYDDLVLKTDTEEGP-------------------------LIVPHERIAERDFVLAPLCDVAPDLMHPVLKQSMQQLYDTLQAEEQRY--VPPVPMLPVDKNTP----WSL---GSKTFVMGIVNVTPDSFSDGAELETAAAAVQKALEMARAGVDIIDIGGESSR---------------------PGAESVTQDEELSRVLPVIRGIRE------KSKISISIDTTKAEVARQAIEAGANIVNDISAGLNDTEMLATVAKLRVPIVLMHMRGTPKTMTGLKEYE-DVVTEVSDVLNERVAAAEAAGIFR 350          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: A0A3F2RHD0_9STRA (Pterin-binding domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHD0_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.620e-86
Identity = 177/408 (43.38%), Postives = 236/408 (57.84%), Query Frame = 1
Query:   16 ATVYLGLGSNVGDKSANLLRACKGLSE-LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGLVTK-ETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            A VY  LG+N+GDK ANL +A   L++ +G V+ATS LY TAP YVEDQP FLN   R+ T+L P +LL   K++E  IGR  ++RWGPR +D+DIL YD L  K ET +G                          L +PH  + ER FVL PL D+AP+L+HP+L   +  L   + + + +   +    +LP+      T  WPL   G +TFVMGI+N TPDSFSDG   +    AV+ AL M R G DIVDIGGES+R                     PGA  V EE E+ RV+PV+  +R       +  + IS+DT +A+VA  AVAAGA++VND+S G  DP MLA VAK  VP+V+MH RGTP+TMT L +Y  D+V +V + L++    AE+ G+ R
Sbjct:    5 ARVYAALGTNLGDKLANLEQALDLLTQFVGPVEATSRLYSTAPQYVEDQPAFLNLVARVKTELQPKELLRAFKAIEREIGRTPSLRWGPRLIDVDILLYDDLHLKMETEEGP-------------------------LIVPHERIAERDFVLAPLCDLAPDLLHPVLKLPMHRLYDNLKAGEQRY--VAPVPMLPVDK----TAPWPL---GKKTFVMGIVNVTPDSFSDGSDLATVSAAVQKALEMERAGVDIVDIGGESSR---------------------PGAEPVTEEEELRRVLPVIRGIRE------QSKIAISIDTTKASVACQAVAAGANIVNDISAGLKDPKMLAAVAKLRVPIVLMHMRGTPKTMTGLKEYE-DIVTEVGSVLNERMQVAEAAGIFR 350          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: W2PZX8_PHYPN (Dihydropteroate synthase, variant n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PZX8_PHYPN)

HSP 1 Score: 268 bits (686), Expect = 7.130e-84
Identity = 168/380 (44.21%), Postives = 220/380 (57.89%), Query Frame = 1
Query:   13 LATVYLGLGSNVGDKSANLLRACKGLSE-LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGLVTK-ETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNL 1146
            +A VY  LG+N+GDK ANL  A   L++ +G V+ATS LY TAP YVEDQP FLN   RL T+L P +LL   K++E  IGR  ++RWGPR +D+DIL YD L  K +T +G                          L +PH  + ER FVL PL D+AP+LVHP+L  +++ L   + + + +   +    +LP+   +     W L   GS+TFVMGI+N TPDSFSDG   +    AV+ AL M R G DIVDIGGES+R                     PGA  V EE E+ RV+PV+  LR       +  + IS+DT +A VA  A+ AGA++VND+S G  DPDMLA VAK  VP+V+MH RGTP+TMT L
Sbjct:    4 MARVYAALGTNLGDKVANLENALAMLTQTVGPVEATSRLYTTAPQYVEDQPAFLNIVARLRTELKPKELLGAFKTIEREIGRTPSLRWGPRLIDVDILLYDDLDLKTDTEEGP-------------------------LIVPHERIAERDFVLAPLCDLAPDLVHPVLKQSMQKLYDTLQTGEQRY--VPPVPMLPVDKSAP----WSL---GSKTFVMGIVNVTPDSFSDGAELATVAAAVQKALEMERAGVDIVDIGGESSR---------------------PGAESVTEEEELKRVLPVIRGLRE------KSKIAISIDTTKAEVARQAIDAGANIVNDISAGLKDPDMLATVAKLRVPIVLMHMRGTPKTMTGL 322          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: A0A225VU83_9STRA (Folic acid synthesis protein fol1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VU83_9STRA)

HSP 1 Score: 272 bits (696), Expect = 7.940e-84
Identity = 173/408 (42.40%), Postives = 234/408 (57.35%), Query Frame = 1
Query:   16 ATVYLGLGSNVGDKSANLLRACKGLSEL-GKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGLVTK-ETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            A VY  LG+N+GDK ANL  A   L++L G V+ATS LY TAP YVEDQP FLN   RL T+L P +LL   K++E  IGR  ++RWGPR +D+DIL YD L  K +T +G                          L +PH  + ER FVL PL D+AP L HP+L   ++ L   +   + +   +    +LP+  ++     W L   GS+T VMGI+N TPDSFS+G    +  TAV+ AL+M R G DI+DIGGES+R                     PGA  V E+ E+ RV+PV+  +R       +  V IS+DT +A VA  AV AGA+++ND+S G  DP MLA  AK  VP+V+MH RG+P+TMT+L +Y  DVV +V + L++   AAE+ G+ R
Sbjct:    5 ARVYAALGTNLGDKVANLENALVMLTQLVGPVEATSRLYTTAPQYVEDQPAFLNLVARLQTELKPNELLGAFKTIEREIGRTPSLRWGPRLIDVDILLYDDLDLKMDTEEGP-------------------------LIVPHERIAERDFVLAPLCDLAPTLEHPVLKQPMQKLYDNLKEGEQRY--VAPVPMLPVHKNAP----WSL---GSKTIVMGIVNVTPDSFSEGAGLENVATAVQKALDMERAGVDIIDIGGESSR---------------------PGAESVTEDEELKRVLPVIHGIRE------KSQVAISIDTTKAEVAHQAVEAGANIINDISAGVKDPHMLATAAKLRVPIVLMHMRGSPKTMTDLKEYE-DVVAEVSDVLNERVAAAEAAGIFR 350          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: A0A8K1CG92_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG92_PYTOL)

HSP 1 Score: 271 bits (692), Expect = 4.280e-83
Identity = 177/405 (43.70%), Postives = 227/405 (56.05%), Query Frame = 1
Query:   19 TVYLGLGSNVGDKSANLLRACKGLSE-LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDG-LVTKETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGV 1227
            T+Y  LG+N+GDK  NL  A   L E +G ++ATS LY TAP YVEDQP F+N   RLST L P  LLE  K++E  +GR  + RWGPRA+D+D+L Y    +  ETS+G                          L IPH  + ER FVL+P  DIAPE VHP+    +++L+  +   +  A+      +LP+   +     W L   G++TFVMGILN TPDSFSDG   S    AV+ AL M ++G DIVDIGGESTR                     PGAA V  E E+ RVVPV+  +R       +  + IS+DT +AAVA AA+ AGA+++NDVS G+ DP+ML   A+  VPLV+MH RGTPQTMT L  Y  DVV +V   L     AA   GV
Sbjct:   11 TIYAALGTNLGDKVGNLETAVALLRERVGPIEATSRLYCTAPQYVEDQPVFVNIVVRLSTTLSPPALLEAFKAIERDVGRKQSFRWGPRAIDVDVLFYGTRALATETSEGP-------------------------LVIPHERIAERDFVLVPFCDIAPEFVHPVHNKPMRELMHAL--QQSVAAYAPPVPLLPVDKQTP----WQL---GTKTFVMGILNVTPDSFSDGADLSTAELAVQRALEMEQEGVDIVDIGGESTR---------------------PGAAPVSVEEELERVVPVIRGIR------AKSTIPISIDTTKAAVARAAIEAGANVINDVSAGEKDPEMLRTAAELKVPLVLMHMRGTPQTMTTLKQYE-DVVAEVAAYLQGRVLAATQAGV 353          
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Match: A0A662WV05_9STRA (Pterin-binding domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV05_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.910e-82
Identity = 175/396 (44.19%), Postives = 233/396 (58.84%), Query Frame = 1
Query:   52 DKSANLLRACKGLSE-LGKVDATSFLYETAPMYVEDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDILAYDGL-VTKETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHERPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMGADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNMVRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMSRVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGGKFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDCTGAAESIGVPR 1233
            DK ANL  A   L++ +G V+ATS LY TAP YVEDQP FLN   R+ T L PA+LL   KS+E  IGR  +IRWGPR +D+DIL YD L +T ET++G                          L +PH  + ER FVL PL D+AP+L+HP+L  +++++ K++   + +   +    +LP+   +     WPL   G +T VMGI+N TPDSFSDG   +    AV+ AL M R+G DIVDIGGESTR                     PGA  V EE E+ RV+PV+  +R       +  + IS+DT +A VA  AVAAGA++VNDVS G  DP+ML+ VAK  VP+V+MH RGTPQTMT L +Y  DVV++V   L++   AAE+ G+ R
Sbjct:    1 DKLANLELALDMLAQTVGPVEATSRLYTTAPQYVEDQPGFLNLVARVRTALPPAELLGAFKSIEREIGRTQSIRWGPRLIDVDILLYDDLQLTMETAEGP-------------------------LIVPHERIPERDFVLAPLCDLAPDLMHPVLELSMREVYKRLQEGEQRY--VAPVPMLPVVKAAP----WPL---GQKTLVMGIVNVTPDSFSDGAELATASAAVQKALEMERNGVDIVDIGGESTR---------------------PGAEPVTEEEELRRVLPVIRGIRE------QSAMAISIDTTKAEVARQAVAAGANIVNDVSAGLKDPEMLSAVAKLRVPIVLMHMRGTPQTMTGLKEYT-DVVEEVGAVLNERAAAAEAAGIFR 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9761.23860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL2_ECTSI6.710e-14958.26Pterin-binding domain-containing protein n=1 Tax=E... [more]
A0A835YYJ5_9STRA1.550e-9648.75Dihydropteroate synthase-like protein n=1 Tax=Trib... [more]
A0A6H5JQ34_9PHAE5.660e-9455.52Pterin-binding domain-containing protein n=1 Tax=E... [more]
G5AC99_PHYSP2.890e-8743.63Pterin-binding domain-containing protein n=6 Tax=P... [more]
D0N9I9_PHYIT4.070e-8742.65Folic acid synthesis protein fol1, putative n=16 T... [more]
A0A3F2RHD0_9STRA1.620e-8643.38Pterin-binding domain-containing protein n=3 Tax=P... [more]
W2PZX8_PHYPN7.130e-8444.21Dihydropteroate synthase, variant n=8 Tax=Phytopht... [more]
A0A225VU83_9STRA7.940e-8442.40Folic acid synthesis protein fol1 n=1 Tax=Phytopht... [more]
A0A8K1CG92_PYTOL4.280e-8343.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WV05_9STRA1.910e-8244.19Pterin-binding domain-containing protein (Fragment... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9761contigP-canaliculata_contig9761:801..11745 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.7
Seed ortholog evalue2.8e-123
Seed eggNOG ortholog2880.D8LRL2
Preferred nameFOL1
KEGG rclassRC00002,RC00017,RC00121,RC00721,RC00842,RC00943
KEGG koko:K13939,ko:K13941
KEGG ReactionR03066,R03067,R03503,R03504
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ModuleM00126,M00840
GOsGO:0003674,GO:0003824,GO:0003848,GO:0004150,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016772,GO:0016778,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019752,GO:0031967,GO:0031975,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
EggNOG OGsCOG0294@1,KOG2544@2759
EC2.5.1.15,2.7.6.3,4.1.2.25
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size1236
Cds size1236
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817339.4397607-CDS-P-canaliculata_contig9761:800..8961622817339.4397607-CDS-P-canaliculata_contig9761:800..896Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 801..896 +
1693495233.1143513-CDS-P-canaliculata_contig9761:800..8961693495233.1143513-CDS-P-canaliculata_contig9761:800..896Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 801..896 +
1622817339.4505613-CDS-P-canaliculata_contig9761:1048..12061622817339.4505613-CDS-P-canaliculata_contig9761:1048..1206Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 1049..1206 +
1693495233.1319788-CDS-P-canaliculata_contig9761:1048..12061693495233.1319788-CDS-P-canaliculata_contig9761:1048..1206Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 1049..1206 +
1622817339.4628747-CDS-P-canaliculata_contig9761:1670..17441622817339.4628747-CDS-P-canaliculata_contig9761:1670..1744Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 1671..1744 +
1693495233.1462412-CDS-P-canaliculata_contig9761:1670..17441693495233.1462412-CDS-P-canaliculata_contig9761:1670..1744Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 1671..1744 +
1622817339.4729533-CDS-P-canaliculata_contig9761:2461..27531622817339.4729533-CDS-P-canaliculata_contig9761:2461..2753Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 2462..2753 +
1693495233.1712894-CDS-P-canaliculata_contig9761:2461..27531693495233.1712894-CDS-P-canaliculata_contig9761:2461..2753Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 2462..2753 +
1622817339.4855757-CDS-P-canaliculata_contig9761:2960..32001622817339.4855757-CDS-P-canaliculata_contig9761:2960..3200Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 2961..3200 +
1693495233.1827714-CDS-P-canaliculata_contig9761:2960..32001693495233.1827714-CDS-P-canaliculata_contig9761:2960..3200Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 2961..3200 +
1622817339.5048382-CDS-P-canaliculata_contig9761:11098..113561622817339.5048382-CDS-P-canaliculata_contig9761:11098..11356Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 11099..11356 +
1693495233.1928608-CDS-P-canaliculata_contig9761:11098..113561693495233.1928608-CDS-P-canaliculata_contig9761:11098..11356Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 11099..11356 +
1622817339.519264-CDS-P-canaliculata_contig9761:11627..117451622817339.519264-CDS-P-canaliculata_contig9761:11627..11745Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 11628..11745 +
1693495233.205347-CDS-P-canaliculata_contig9761:11627..117451693495233.205347-CDS-P-canaliculata_contig9761:11627..11745Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9761 11628..11745 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9761.23860.1prot_P-canaliculata_contig9761.23860.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9761 801..11745 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9761.23860.1

>prot_P-canaliculata_contig9761.23860.1 ID=prot_P-canaliculata_contig9761.23860.1|Name=mRNA_P-canaliculata_contig9761.23860.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=412bp
SRRSLATVYLGLGSNVGDKSANLLRACKGLSELGKVDATSFLYETAPMYV
EDQPRFLNAACRLSTKLGPADLLERVKSLEASIGRAGNIRWGPRAVDIDI
LAYDGLVTKETSKGAVGDGRDGANGKRTHNDGGSRRQHRWLQIPHPLMHE
RPFVLLPLADIAPELVHPLLGSTVKDLLKKILSPKDQASGIGGRRVLPMG
ADSGGTRLWPLEAAGSRTFVMGILNATPDSFSDGGLYSDTFTAVEHALNM
VRDGADIVDIGGESTRRERPTRYDQCDQFDYVHEILPPGAAEVPEELEMS
RVVPVVEELRRATLANGEGGVTISVDTRRAAVAEAAVAAGAHLVNDVSGG
KFDPDMLAVVAKAGVPLVMMHTRGTPQTMTNLTDYGGDVVDQVCNALDDC
TGAAESIGVPR*
back to top

mRNA from alignment at P-canaliculata_contig9761:801..11745+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9761.23860.1 ID=mRNA_P-canaliculata_contig9761.23860.1|Name=mRNA_P-canaliculata_contig9761.23860.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=10945bp|location=Sequence derived from alignment at P-canaliculata_contig9761:801..11745+ (Pelvetia canaliculata dioecious)
TCACGAAGAAGCCTCGCAACGGTTTACCTCGGACTCGGCAGCAACGTCGG CGACAAATCCGCAAATTTGCTGAGGGCCTGCAAGGGGCTAAGCGAGGTGC GGTAAGCTCTTTTTTTCGTCCGCTCTGGGCCTTTCGACCTGTTGCAAATC TCACGCTGCTACTGATCCTAAAGTAATGAGGTGGTAAAAGCCTCCTAGCA CGCTGATTGATCAACAGTGACTCGTTTGGCCGCGTTGCTCCGGAGCAGCT AGGGAAAGTCGATGCCACCTCGTTCTTGTACGAGACAGCTCCCATGTACG TCGAAGACCAGCCCCGGTTCCTGAACGCGGCCTGCCGTCTTTCCACCAAG CTAGGTCCAGCCGACTTGCTCGAGCGCGTCAAAAGTCTCGAAGCTTCAAT TGGGCGGTGAGGGAACAAGCACGAACAATAGATAACAACAGATAGGGGTG GAGTTGTACTGTTTCGCCAATAAAATAGATTAAAAAAATGCTCAAAGCAG CTTGTACGCGCGCGTGTCTCTTATTGGTTTGCCGAGTTTTGAAAGGGTAA AGTTAGGCTTTTAGTCTCTTGCGTTCCCGGTCGCCGATTTGTTTTCCCTA AAAAGTGCAGCAATTTTTCTGATCGTTTTCATAGCTATCATGGTCCGTTC GCGTTTACAAAATACAACTATGAATCGCGACAGAGGCATTTCAGGTCAAA ATGCGATATTATTTTAACCCCCTTGCCTGGCGTGAAAGAATGGGTCTCAC CGCATCCAAAGAGCCCAGCCGCTTGAGCTTTGTATAATCGTTTGCCATTG TGACTCCGTCTGATCTTTCCGTCTAAACTTCCCTCTCTGCCTCCCCCATC GCCCATTTGATCGCGTAAAGGGCGGGTAACATTCGATGGGGACCCCGTGC GGTCGATATTGATATCCTCGCGTACGACGGGCTCGTTACCAAAGGTGAGA GCAAAGCAAGCACGGCCGCGTATACGCTTACGCTATCAAGCAATGAGACG AAGACATCCATGACGGCGGTCGATGTAAGGCTTACACTGCCGTCTGTATG TATTTATGTATGTATGGCCATCACATATACCAAGGGTAAGTTGCCTGTCC TCCTCGTGGTCAGCTGAACAGGGAAAATGAACTTTTCCCTGTCGCCGTTC GCTCCTGAGAGTATGATCTCGCGATACAGGTTCGGCAGTCCCGTTCCGCG TCAGCCTGCTCATTCTCCACACTCAGGCTGAATCTGGTCCTTGCTCACGG GATCCCTCCCGATTTTCGGGGCGGCGTCCATTTATTTATATCACCAACCG CCAACGGGTCAGTCCCGAGTTTATTAGATCATGCAATTGCGTGCCGATGG GCGTTCACTGCTGAAAGTCCGCCGGCACAGGGCCAGTATCCTGAAGGTAA TTTTGGTAACGTGTGCTCCTTTGCAGGTACCACCATGGAGCAATTAATGC GCGCCTCACTTTTACCACTCCCACTATTGGTCCAGTGGACATGTGCGATT GTAGAAGAGATATGATGGTTCAAGGGTCGTAGTTGACATAAATGCGCGCT TTGGTTTCTGGTTCGCACTCATTATTGACACCCAGCCGCCGGTCCAGCAA GCAAGCAAGCAACCACAAAAATCTATCCTGCTTGGATCCCGTCACTTTTG TCGCAAGTCAGAGACGAGCAAAGGAGCCGTTGGTGACGGACGCGACGGGG CGAACGGGAAACGTACACACAACGACGGGGGATCGAGGAGGCAACACCGC TGGCTTCAGATACCACACCCGCTGATGCACGAGAGACCTTTTGTCCTTCT CCCGTTGGCGGACATTGCACCAGAGCTGGTCCATCCCCTGCTAGGGTCCA CCGTGAAGGATCTGCTGAAGAAAATATTGTCCCCCAAGGACCAAGCTTCG GGAATTGGAGGGCGAAGGGTTTTGCCGATGGGTGCGGACAGTGGAGGAAC AAGGTTCGTAGGTCATGGGCGGTCGACGATATGATGTACCAGGATGGTAT CAGGCCTCTCGTGCATAGACCGGGCAACTGCGTGTTGACGATGTTTTTGC CGCATTCGCTTCTGTCATCACTGTCCTAGGATCGTGGGCGTGACGGAATC TCATGTTATGTGACACTACGTTAAGAATAACATACACAGAACGTCGCCGC TTGCAAACAGATTGTGGCCACTGGAAGCGGCGGGTAGCAGAACGTTCGTC ATGGGCATCCTGAACGCGACACCAGACAGCTTTAGCGATGGCGGGCTGTA CAGTGACACGTTTACAGCAGTTGAGCACGCGCTAAACATGGTGCGGGATG GGGCGGATATCGTGGACATCGGCGGGGAATCGACCAGGCGAGAAAGACCA ACCCGATACGACCAATGCGACCAATTCGATTACGTTCACGAGATTTTACC GTCTTGGGGGAAGTCAAACGGAAGAGGGGTTAAGAGATCAAAAATAGATG TATTAATGATTTCCGGCAGTATCCCGCGGATGTTTTTTTTTTCCTGGTGC GTCCGTCCTGTTCTGCTGTGGCATATTTTGCCTATCAGCATGGAGACGTA TCAAAACCCCGTCTTTGGTAGGCCGGCCCAGATAGCCCCGAGCGATGATG GCCAACAACGATTGGGTTATTATGTTGTCGATACACAACGCTCCCGGCGG CCGCCCTGGATTCTGTCTGTCAGAAGGGATCATGGCTGTAGAGGTATGGA AAAGTGGGGATCAACCACAATTTATTATCAAGAAGAGAATAATGATGAGG TAGAGTAGTTGCGAAAGTGTAGGGTAGCAATTGATCAGACAGAGTAGCTT ACAGATAAGATGATGGCAGATATTTTAGGGCTGGAAAGTAGAGTGACCAC AGTGCGGCGGAGCTCCATCCTTTTTTATAACGACCACTTGGAAAGCATAA CCAAACATCCAGCTACTTACTATCCTAGTGTACGTCTCTTGGCTATTTAG TTCCGGAAAACCCGATGTGTTCCAGAAGTTATCAACCTACCATCCTAGAT ACGTCGCATTTCACTTGAACTGTGCTAAAACTGACATCCTCCCTCCCAAA TGTAATGCTCTTGAGTAGCACCAAATTCTAACTCAATGTTTCCATGTATT CTACTATCCATTTTGTTATCTGATACTGCAGCAGCACCACACCACCAAAG AAAACATTATTTCAAATGTTGAATCCTTCGTACTTCAAACAAACCCACGA GGACATCAAGAAAAACTTATAAACATTTGTCTTGCAGCCTATAATCACGG TTAAACGTTTTGACATTTTTTTCCCCCTGACTGGGGGATGCTCAGAAGGT CTAGATACGTTAAGATTTTTCTTTAAACAACCACAATTGGCTCATTCGAA ATATATACTGAATTAGTAGGCTCCACCAAAAAACGACAACAGTTTGTCGA CATGCCTAAGGTATACGAGTTGTTGTGCATCTTGTCATACCTCTTCATCC AGTGAGTTGCCATATACCGTTTGTTCACCAATACGTTGGTATATCCCAAA GGTCACATTTTTTTTAATTTCCCGTTGCCATAGTTGCCAGCCTCCATCCT CCCTTAACCGAAATTATAATATTATATCATACGCTGAATGAAGTTCTCGC AAAAACATTTGGTCACAACAGTACCACCTGAGGTGCATAAGACAACACAG CACAAACTTCGGGAGAGCAGTGTTAGTGCGTACTAATAGCTTTAGATTAC CATTCGACTTTTTTCTTCTTTTCAAAATTTACTACCCTGTTCTGTCCCTC AGGCCAACATATTTTTTTTCTCACAAAAACTTGTCTACCTGTCTCTCAGT TGATCCTTTGTTGACACAAAATTCAACACCAGTTTATTTTCTTCCACCCA ATCGCAAACTTCAAGGCAACATGCTTTAAACGACTTGAATACTTGAGAGT TTCCTGCTAATAAAAGTGCTCCCTGGCTATCAAACAGATTTGAAAGTCTT CGAAATTTCTCCATCCCCATTTTCGGAGTACTCCCAACAGATATCTGTCA TTTTTAGAGAAGAAGTTCAGCGCTACAAACTAACGGTTCTTTGTAGCCAT ATTGACGAATGAACAAAGAACATAGTATCAGTGGTAAAGCGTGATTGCTC TGGATTTCCTGTAATACGGTCAAAATTAGTTTTTCGAGAGCTGAGCTGGT GAGTAGCTCAGAATAGCTTTAATTAGGCGTGAATAATGTACGAGCACCCG CCCAAGTATGAGGTGGTTGGTAACATTTTCCTGGTAACAATCAGTAAGGC AGCGAGTGTTAATATAACACGGAGCATAAAGTAGTACAGGGAAACATGTA AGAGGTATACAGCTTTCTCTACTTATACCTTACATCAGGTGCATGAATTG GACTTGCGAGCATATTTTGAAGTCGAGAGTACAAGACCTTTTGGTTGAGT CAGAACCTGTAGCTAAAATACAACGAAACTACCCCATAGGGCATTGAGAA ATGGTAGGCATGGAATACTCTCTAGATATTCAAATCAATTCCAAAATTCG ACGGGCAAAATTGTACAAAGCGGAAGAGGTGGATGAGGTCATTTATAATA TTGTGCAGGTATATTGACCTTTTTTTAGTAAAATAATCTGGACTCGAGAA ACCTGAACCTATTTCTAGAGGTAGGAGTATAGGAGTGGAAAATCCCAGTG AGGCTGATGGCAACGAAACCATCCGAGGGAGGGTCGTGGTAACGATGCGG GCAATATTGGTAGACATGAACCTTCCAATGTTGATGACAATAGGGCTTGG GATTCAGCAAACAACACTAGTTTAGTGTTCTGAAACTTACAAGGAGCGGC AGCCCGAAGCGTATTGTTGCAACTCGAACCCAAAATGGTGAACCTTCAGA CGGAAAAAAGGCGTGGCTAGCTCTACAGAGCGAACACCAGAACTCTTCTC GGCAGCGTAGACGAACCCTCTTGTGTCGCTTGGGTAACATGTTGAAGGCA AATACTGATTGCGATCCATTTCTGTCTGAAATATATCAACTACGCCCCGA ACTTAGTGATTTGGACTAAGTGGTCTCCACTAAGTGCTTGATTACCATCA TTCTTGATGCGTTGCAAGTTGAGAAATATTCCACCATAAAAATTCAGGCA ACTAGAGGTACTGATTTTAGTATGGAATCGATTCAAAGTATGATTAAAAC TATCTTCATCAATAATTCGGAAAGGTTGTCAATTACCTAAAATCAAAGCC GAATCGTGGGGATCGGGAATATGGCCGAGAGTCAGCAGTGTCCACTGTAG CAACTTGCCACTACACTACAAAAAAGCGTAGTAGTAATACCCCCTCAAAC GAGGAGTATGACCAGCAGACATTGGAGATGGAAAAGTCAGAAAAAATATA ATTGTAGAACGCGGTGGTGTAGTTACCGTAACAGCAATGGCTACTGAAAC GAAGAGTGTTCCAGCAAAACTTAGAGATGGAAAAGTCAGGAAAAATCGAT AATGGCAAGCCAAGAAAGGGTGTAGTTATCGTAATAGTAATGGCCATTTG AATGAGGAGTGTTACTAGTAGAAAAGAGGCAGTAAATGTAAGGACAGTTC TACTGTTGATGGTAAATAGTGAACCACATTAAACTTTCGTTGCAGATAGC ACACCCACTAGCTGCAATGTTAAGTCTTGCAGCTGTAGGGGTAGAATAAA TAAAAAATGTTTTGATAATGGAGACGAATCGGATTTACCACCAGGAGTCG GTCTTAGTTTTGCAGCCTGTCACCTGCCGCTCTCATCAAGCAGATGGTTT TCAACTATTGGTAAGACTCAGGGTCGTCAAAACACTTTGTTGATCCAGAG TTGATTCGTGGGGCTAAAAAGACAATGTAGCAGTATACTGAGATGAGTCT TCCTACGGAAATAAAAGCTGCCCGAGACAAAAACCTCATACGAAACAGCA CATGACATTCTACTGTTTTTAGCACGTGGTACAGATGAAGTTTGCAGGAA GGTGAAATTGCCCGTAATACTATTTCCGGGGTTGAAGAGAAATCTATTTT CGAGCTCAGCTGCAGGCCAAAAGAATGTTAAGACTTCCATCACTACGAGT GGGTCATTTCCCGATCTTGGCCTGTTTTCTGTTCAGTTGAGGAGATCTGA TAACATGGATCACCTTGGTCTTGCAACTGCGAAAGAACACGACGACAGAA TCTGTGCTTTTCGCAGGTTCGGGGAAAATGTTTGAAAATGAGACTGTACT TACTGCTCTAGTGCCGAAGAAATCCGTAGCCCTGCCAGCAGTCAGCATCA ACCATTGGTGCCGTTGGCTCGGACATCCCTATAAAACTGAACTGGTACTA CGTAACATCAGGGACTTATATCTAGTAGATTTCGGTGTGAAATTCTCTGA CAAACTGCAGTACGTGTAAAGCAGGGAAAAATATTTGCCGAAAGGGCAAG TCATTATTGGGTTACTGAACCCTTTTAAGTGGTAACAACCTCAATAGGAC CTATATCTCCGACTGCGTGGAGGAAGTCTACTTATATAGCCAATTTTACT TATGTGTACTCGAGATTCAGTGCGGTATACTCTTTCCAAATGCCTAGCTC TTCTGTATTACCCTGGTGGACAAAATAACAAGCCTAGCTCTTCTGTATTA CCCTGGTAGACATCTTCATAAAGTTTGAAAGAGATCTTGCGATACCATTT CGTAGGAGAGTACCTGGTACAGTTTTTGAGGTCTGATCAAGGGACTGAAC TACACAAATCATGATTTCAAACAGTATTGCAAAGGACATGAGCGATTAAG CAATCCACTGCGTCGAAATACGCTCCAACAAAATGGAATATCTGAAAGAG CTGGTAAGGCAGTAACAAACATTGGGTATTTTTTAGTTGAGACAGGTCTA CCAAAACGTCTCTGGGGTGAATTAGCTAGTATGGCAGTCTTTCTGAAGAG TCGTATTCCGCATGGTGCCCGTGGTAACGATACGCCTCACTATCGAATAT TTGTGGAAAATCGTCAAGTATCATCCCTTCTCTGCGAGTTATAGATCAAA CACGTTTGTTCACGAGTAGTAGCATGTAAAAAATTTGACCAGAGAGCTTG GGAAGGTATTTTAGTGGGGTACAAAAACGACAGCCTAACGTCCAGAACTT TACGATAGCACTGATGGTAAGATAGCTCTTGTAATGTGACATTCATAAAG CAAATGCAAAGTAATACCCGTCGTCTATGGTTCATTATGCTGACGAAGGG AGTGTGAGCTTAGCTGCTCTTGAAAACGTTTATGATGGGATAGCCAACTT TGCATCGACGGGCTTGGAAAATGTTGAAGGTGACAATTACTACAGTACGA CAGAATGACCTTGCGATCCAGAGAAAGAGTATAGGGGATAAGGAAGGAGT AAAGCCTCTGAACAGTAGCAATCAAGAGCAGCAAAGCAAGTAGCAATGCT TGCTTTGGAAATTATTTCTAATTATATATATACAGTAGTATTGGAGACGA CTGTTCTTCCAGTGCCTTGCATAAACATCAACGCACCGTCCACTTTTGCT GAACCGATGAACTCAGAATACTCGAAGGAATGGTTGGAAGCAATGGAACT CGAGCTGGAAAGTATAAGTGTTCATGTAGTAACAGTACTAACTCCTGTTT CAAATATCCCTAGAAATAAACGAGTCATAGGAACAAGATGGGTTACCAGA TTAAAGTCTGACGCGAGTTTGAAGGCAAGACTAGTTGGTTGCTCTCGGTT GGAAGCAAAGGCGTGGTATTGATTGTGGAAGCACATTTGCACCTGTCTGC AGATTAGTAACCAGCGACAACTTTAGCTATTGCTGCTGCGAAGGACTGGA AAGTTATTAGTCTGGATTTTCGAATGGCCTTCCTAAATGTGTCCTAGACA AAAAGAAACAAGTTTTTGTAGAATAGACCCCAGGTTTGGAATCAACAGAT CTAAAAGGAGCATCTCACGTATGGAATGTAACCGTTGATTGGAGGTTAAA ATTGTTGTGATTCAACTCACTGATCTCTGGCCCTTGTGTCTACATTAGGG TATCGCGCGAGTCCTTTGTAATGTTGACATTATATGTAGATGACCTACTG GTCACAGGAATTTCAAAAGAAGAAATTGATGAAATCACTTGATAGCTGAA TTCTTCATGAATGACTTGAGTGACGTCGGAGATCTTGGGTGTTCAGATTC AACGATATTTTGAAGCTGGGACAAAATCACTTATTAGTAGCCAAGATAAA TACGCCAAGGCTATTTTGGAGCGATTTGGAATGAGTAATTGTAAGCCCCT AAGTACACCTGGGACAGGAAGGTAACTACTAATAATAGCAAAATCCGAAG GAGTGAATATCTAAATGAAAAGGAAACAAAGGAATAATATCAACCACTTA TTGGTTCTCGTATATTTTTTACTACAAATACGAGATTTGACATAGCTTTT GCATGTGATGCAATCGGCAAAATTTATAATTAAACCAAATTCCGTACACA TGTTACGGCAAAACGTACAGTTAGATACCACATCTGTGGTTTATCTGACC GGAAAATGACGTAAAGGAGAGAAGAAAACAAAGAATTATAGCGATATATA GTAATTCATCGTATGCTACTACAGGAGATCGAGAAAGGTCGCGCTCCATC AGTGGTACGATGTTTTTGTCACTTGTCACTCGTCAGAAGGGCTTGTTCAT TTTTCAAGTCAGCTACAAAAAAACGTGTGCTCAATCAACTACAGAAGGAG AGATTATAGCGCTGATGATTAGCTGTGCTAAAAACGGCATTCATCTGTGA GGATCACTCCGAAAACAAGGATGGAGAAATTTCAAAGACTTTCAAATCTC TTGTGATGGCGAGGGAACACTTGTTTTATTAATATTAATAGTAGGACACT CTTACGTATTCAGGTCGTTTAAAGCATGTTGCCTTGGAGTTTGCGAGTTT TCGACAGTGAGTGGGAGACAATAAACTTGGCATCGAAATTTGTGCGAACA AAAGATCAACTTAAGCGACAGAATGACAACATTTTGTGAGAAAATATTTT TGTTGGCCTGAGGCTCAGTACTGCAATCGGAATAGAAGCCGCAATGTTAC AAAGTTTAAGTCGTGGCTTTGTGTCTTCTGCTCTAATTTCTTATTATGGA GGTGCCTTACGATGGATGGCGTACTCGTGGGTGAATATTATGGGGGATTA ACCCATATGTGTGCGTGTGTGTGTGTGTTGTCATCCCATTTGTCGTGGAC GTCAGACTTGTGGAAGCACCAGCCGGGGTCACGCAGGAGGATGAAAATAT CATTTAACCTATTTGACTACGAGTCGAATAAGCAATAACCCTTTTAAAAA TAGTTTTGAAACAATGCTGTGGTTGCTACACCAAAAAAAACAGTCACATT ACCTACCAAAATTATAATTACAAAAGCCTCCCGGACAATACTCCAATACA AGAGGAGAGCACCGAGCTAACAAAAAAACACCCGCGGTAACCATGGTTGC AACATGGATAAGAGCCGAAACCGGGGTTTCCAATTTAGTTACGAACTCTT TAATACTTTAATTTAAGGGATAAGACATTGTCGTAAACTTTCCCCCAAAA AGTCACATCTAACTCATTATTTGTATGAAAATAAACTGACGTCGAAGATG ACTTAAATTTTCAAAATAAGGAAACCAAGAAATTAATTCCTCGAAAGACA AAAATATATTTTGAAACAAAACAATACACACTGGTACCTCTTCAGCTTTA GCATTTTTATTGGTACCCAGAACAGAGTAATACATTTTTAAAAGAAGAAA ACTCAAACGGTAATCTCAAGCTATTAGTATGTAATGCTCTCCCGACGTTT GTGCTGTGTTGCCTTATGCACCCCAGGTGGTGTCCTTGTGACCAGACATT TTTGCAAAGAATGGATGCTTTGATTATGCTATCCAAGTGGTCTTAGTAAA GAACAATGGAGTACCACCTACCTCACCATGGTCACTCTACCTTCCAACCC TAAAATACCTGCCATCATCAGATCTGCAAGGCACCTTGCCTGACCAGTTG CTGCCCTACGCTCCCGCAACTACTCCTACCTCACCGTTATCCTCTTCTTG ATATTAATAATATAGTGTGGTTTACTCCTAATATCTCATATACCATTAGT AAAGTCAAGATCCCTTCGGACACCGTCTTCGTCTTATTAATGGGACGATG GCTTACTCTTCTTGGATCCACGCACGGAATTTCGACAAAGGTTCCGTCAA ACACTCGCGGCCGATGCTGAGACCCGGTTGCGGTCGCCACGCGTCGATCG TACTCCCCTCCACCGTTTGGGCGCGCCCGATGCATTTCCGCCACGCAGGC CCGGCGCGGCTGAGGTGCCCGAAGAACTGGAAATGTCTCGCGTTGTGCCG GTCGTGGAGGAACTGCGACGAGCCACCCTCGCGAACGGAGAGGGTGGCGT GACCATCAGCGTAGACACTCGCCGAGCAGCCGTGGCGGAGGCGGCTGTGG CGGCAGGGGCGCATCTGGTAAATGATGTGTCGGGCGGGAAGTTCGATCCT GACATGCTGGCGGTCGTTGCCAAAGCCGGGGTGCCTCTGGTCATGATGCA CACGCGGTGAGTCGAATGACTTCTTCAAATATGATTGGTATTATTTTTTA ACATTATTCATGATCCGGCGGCGTGATTGTCTTCAGAGACAACCTGGATT CTTGATGGCGTCGGTGATGTCAATGCTGCTCGCTCGCGCGGTATGCAGCT CTCGGAACTGCGTGCACTCTCACTGCTTTCAACAGGTGACCGATTTCGAT CGGAAACCGGAAGAGTATCTTGCAATTGAGTGACCATACTCTCCTCTCTG CAACGCCTTTCGGAAACTATTTTTTAGCGGGACGCCTCAGACGATGACAA ATCTCACAGACTATGGAGGTGACGTCGTGGATCAAGTTTGTAATGCGCTA GACGATTGCACCGGGGCTGCCGAGTCTATCGGCGTGCCGCGGTGA
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig9761:801..11745+

>mRNA_P-canaliculata_contig9761.23860.1 ID=mRNA_P-canaliculata_contig9761.23860.1|Name=mRNA_P-canaliculata_contig9761.23860.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2472bp|location=Sequence derived from alignment at P-canaliculata_contig9761:801..11745+ (Pelvetia canaliculata dioecious)
TCACGAAGAAGCCTCGCAACGGTTTACCTCGGACTCGGCAGCAACGTCGG
CGACAAATCCGCAAATTTGCTGAGGGCCTGCAAGGGGCTAAGCGAGTCAC
GAAGAAGCCTCGCAACGGTTTACCTCGGACTCGGCAGCAACGTCGGCGAC
AAATCCGCAAATTTGCTGAGGGCCTGCAAGGGGCTAAGCGAGCTAGGGAA
AGTCGATGCCACCTCGTTCTTGTACGAGACAGCTCCCATGTACGTCGAAG
ACCAGCCCCGGTTCCTGAACGCGGCCTGCCGTCTTTCCACCAAGCTAGGT
CCAGCCGACTTGCTCGAGCGCGTCAAAAGTCTCGAAGCTTCAATTGGGCG
CTAGGGAAAGTCGATGCCACCTCGTTCTTGTACGAGACAGCTCCCATGTA
CGTCGAAGACCAGCCCCGGTTCCTGAACGCGGCCTGCCGTCTTTCCACCA
AGCTAGGTCCAGCCGACTTGCTCGAGCGCGTCAAAAGTCTCGAAGCTTCA
ATTGGGCGGGCGGGTAACATTCGATGGGGACCCCGTGCGGTCGATATTGA
TATCCTCGCGTACGACGGGCTCGTTACCAAAGGGCGGGTAACATTCGATG
GGGACCCCGTGCGGTCGATATTGATATCCTCGCGTACGACGGGCTCGTTA
CCAAAGAGACGAGCAAAGGAGCCGTTGGTGACGGACGCGACGGGGCGAAC
GGGAAACGTACACACAACGACGGGGGATCGAGGAGGCAACACCGCTGGCT
TCAGATACCACACCCGCTGATGCACGAGAGACCTTTTGTCCTTCTCCCGT
TGGCGGACATTGCACCAGAGCTGGTCCATCCCCTGCTAGGGTCCACCGTG
AAGGATCTGCTGAAGAAAATATTGTCCCCCAAGGACCAAGCTTCGGGAAT
TGGAGGGCGAAGGGTTTTGCCGATGGGTGCGGACAGTGGAGGAACAAGAG
ACGAGCAAAGGAGCCGTTGGTGACGGACGCGACGGGGCGAACGGGAAACG
TACACACAACGACGGGGGATCGAGGAGGCAACACCGCTGGCTTCAGATAC
CACACCCGCTGATGCACGAGAGACCTTTTGTCCTTCTCCCGTTGGCGGAC
ATTGCACCAGAGCTGGTCCATCCCCTGCTAGGGTCCACCGTGAAGGATCT
GCTGAAGAAAATATTGTCCCCCAAGGACCAAGCTTCGGGAATTGGAGGGC
GAAGGGTTTTGCCGATGGGTGCGGACAGTGGAGGAACAAGATTGTGGCCA
CTGGAAGCGGCGGGTAGCAGAACGTTCGTCATGGGCATCCTGAACGCGAC
ACCAGACAGCTTTAGCGATGGCGGGCTGTACAGTGACACGTTTACAGCAG
TTGAGCACGCGCTAAACATGGTGCGGGATGGGGCGGATATCGTGGACATC
GGCGGGGAATCGACCAGGCGAGAAAGACCAACCCGATACGACCAATGCGA
CCAATTCGATTACGTTCACGAGATTTTACCATTGTGGCCACTGGAAGCGG
CGGGTAGCAGAACGTTCGTCATGGGCATCCTGAACGCGACACCAGACAGC
TTTAGCGATGGCGGGCTGTACAGTGACACGTTTACAGCAGTTGAGCACGC
GCTAAACATGGTGCGGGATGGGGCGGATATCGTGGACATCGGCGGGGAAT
CGACCAGGCGAGAAAGACCAACCCGATACGACCAATGCGACCAATTCGAT
TACGTTCACGAGATTTTACCGCCCGGCGCGGCTGAGGTGCCCGAAGAACT
GGAAATGTCTCGCGTTGTGCCGGTCGTGGAGGAACTGCGACGAGCCACCC
TCGCGAACGGAGAGGGTGGCGTGACCATCAGCGTAGACACTCGCCGAGCA
GCCGTGGCGGAGGCGGCTGTGGCGGCAGGGGCGCATCTGGTAAATGATGT
GTCGGGCGGGAAGTTCGATCCTGACATGCTGGCGGTCGTTGCCAAAGCCG
GGGTGCCTCTGGTCATGATGCACACGCGGCCCGGCGCGGCTGAGGTGCCC
GAAGAACTGGAAATGTCTCGCGTTGTGCCGGTCGTGGAGGAACTGCGACG
AGCCACCCTCGCGAACGGAGAGGGTGGCGTGACCATCAGCGTAGACACTC
GCCGAGCAGCCGTGGCGGAGGCGGCTGTGGCGGCAGGGGCGCATCTGGTA
AATGATGTGTCGGGCGGGAAGTTCGATCCTGACATGCTGGCGGTCGTTGC
CAAAGCCGGGGTGCCTCTGGTCATGATGCACACGCGCGGGACGCCTCAGA
CGATGACAAATCTCACAGACTATGGAGGTGACGTCGTGGATCAAGTTTGT
AATGCGCTAGACGATTGCACCGGGGCTGCCGAGTCTATCGGCGTGCCGCG
GTGACGGGACGCCTCAGACGATGACAAATCTCACAGACTATGGAGGTGAC
GTCGTGGATCAAGTTTGTAATGCGCTAGACGATTGCACCGGGGCTGCCGA
GTCTATCGGCGTGCCGCGGTGA
back to top