mRNA_P-canaliculata_contig976.23859.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig976.23859.1
Unique NamemRNA_P-canaliculata_contig976.23859.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: D8LJ11_ECTSI (Kinesin motor domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ11_ECTSI)

HSP 1 Score: 474 bits (1221), Expect = 4.390e-156
Identity = 282/430 (65.58%), Postives = 318/430 (73.95%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSI------EGIRPEVACVLFFQP---------YPDHRDKQRHMHGLLTEELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVG----FETGA------------------NGLD-ATACSTFAANTTEP------------SSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQNVQNSIEIGKRQLLLVEWHGGRELPQEAANDALQG 1146
            KGPTVSGLAEVEA+TPEEIM+LLHQGN SRTQQATRANA SSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAAT+NRGVRL+EGANINRSLLALGNCINALGER NKGQFVPYR  +LTRLLKDSLGGNCRTVMIANI  A++SFEETLNTLKYANRAKNIKTNATRNSLDVN+HISEYVNLIGSLR+EITRLKHQLVRGGR+G  +      +G+    +  + F P         +    D+Q+ + G   +E+      +G + R   A  + +  S+P+  +T  VG     + GA                  NG+D A       A  + P            SS +DRDFVEEVR KIVENFRERMQLRRSL+ELEDQNVQNSIE+GKRQL LVEWHGGR LPQEAA+DAL+G
Sbjct:  136 KGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAASSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGERGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEITRLKHQLVRGGRSGGGVGTGAGGDGVGSSRSEAMVFSPSLKASTNSLFAPADDEQQELRGSRGKEI------TGSSER---ASLLLSPSSSPSAKLTNDVGSVGGVDAGAGSMMEAVDGAAGSGTSSRNGIDLAMVAGVRDAPASSPPVSMADGEGAVVSSPQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEVGKRQLSLVEWHGGRRLPQEAASDALRG 556
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: F0Y736_AURAN (Kinesin-like protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y736_AURAN)

HSP 1 Score: 317 bits (813), Expect = 3.860e-100
Identity = 195/367 (53.13%), Postives = 237/367 (64.58%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSIEGIRPEVACVLFFQPYPDHRDKQRHMHGLLTEELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVGFETGANGLDATACSTFAANTTEPSSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQNVQNSIEIGKRQLLLVEWHGGR 1107
            KGP V+G+ E+EA +  E+M LL +GN  R+Q AT AN VSSRSHAVLQ+ VE+R++A GT A + IGKLSLVDLAGSERAA T+NRG RL EGANINRSLL LGNCINALG++SN+GQFVPYR  +LTRLLKDSLGGNCRTVMIANI A+  SFEETLNTLKYANRAKNIKT+  RN L+VN+HISEYV+LI +LR+E+T LK QL        S  G              P          G + E+L +                                        LDA   S  A     P +  D+  ++E++  + ENFRERMQLRR+L+ELEDQNVQNSIEIGKRQ+++ +W+  R
Sbjct:  186 KGPVVAGITEIEANSATEVMALLQRGNAKRSQHATAANEVSSRSHAVLQITVETREQAEGTRAAIQIGKLSLVDLAGSERAANTKNRGDRLKEGANINRSLLTLGNCINALGDKSNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISASNASFEETLNTLKYANRAKNIKTDVKRNVLEVNHHISEYVSLIQNLRNEVTVLKQQLAN------STTG--------------PG---------GAVLEDLPLDAL-------------------------------------LDAPRASAPARVAKTPGA--DKAALKEMKAWMQENFRERMQLRRTLIELEDQNVQNSIEIGKRQIIVADWNASR 484
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A7S2W525_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W525_9STRA)

HSP 1 Score: 291 bits (745), Expect = 5.060e-94
Identity = 156/207 (75.36%), Postives = 178/207 (85.99%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQL 627
            +GPTV+G+ EVE  +  EIM+LLH+GN +R+Q  T AN VSSRSHAVLQVVVE+R+KA G VA + IGKLSLVDLAGSERAAAT+NRGVRL EGANINRSLLALGNCINALGE+ NKG FVPYR  +LTRLLKDSLGGNCRTVMIANI ++ +SFEETLNTLKYANRAKNIKT   RN + VN+HISEYV+LI +LRSEI+ LK QL
Sbjct:   25 RGPTVTGITEVEVASAVEIMDLLHRGNRNRSQHPTAANEVSSRSHAVLQVVVENREKAEGAVAKIKIGKLSLVDLAGSERAAATKNRGVRLQEGANINRSLLALGNCINALGEKGNKGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISSSVSSFEETLNTLKYANRAKNIKTTVQRNVVSVNHHISEYVSLIENLRSEISSLKTQL 231
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A7S3MBB8_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBB8_9STRA)

HSP 1 Score: 282 bits (721), Expect = 2.520e-90
Identity = 178/317 (56.15%), Postives = 210/317 (66.25%), Query Frame = 1 
Query:  100 RTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSIEGIRPEVACVLFFQPYPDHRDKQRHMHGLLTEELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVGFETGANGLDATACSTFAANTTEPSSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQN 1044
            R+Q AT AN VSSRSHAVLQV+VE+RD+APGTVA + +GKLSLVDLAGSERAA T+N G RL+EGANINRSLLALGNCINALGE+ NKG FVPYR  +LTRLLKDSLGGNCRTVMIANI +A +SFEETLNTLKYANRAKNIKT+  RN L+VNYHISEYV LI +LR EI  LK Q+   G + V                      D+    H  L      GG+   RAH   A      GP +P  ++           G  +T       +    +  + R+ V  +R++IVENF+ERMQLRRSL+ELEDQN
Sbjct:    3 RSQAATAANEVSSRSHAVLQVIVENRDRAPGTVANIKLGKLSLVDLAGSERAANTKNVGARLVEGANINRSLLALGNCINALGEKGNKGNFVPYRDSKLTRLLKDSLGGNCRTVMIANISSAESSFEETLNTLKYANRAKNIKTHVQRNVLNVNYHISEYVQLIDNLRGEIQILKSQI---GSSNV----------------------DRVATSHADLRSR---GGRSPIRAHSPQA------GPRSPMHHLP--------GRGQPSTPFQALRESMRSGAGGEGRELVNNMRQRIVENFQERMQLRRSLIELEDQN 277
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: W4GMD4_9STRA (Kinesin-like protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMD4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.640e-85
Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
            KGP V+ L+E+ A   EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE  +  P TV  +  GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR  +LTRLLKDSLGGNCRTVMIANI  +  SFEET+NTLKYANRAKNIKT  TRN L+VN+HISEYV+LI +LR EIT LK Q+ + G
Sbjct:  287 KGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQMTQQG 497
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A1V9ZPN4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPN4_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.030e-84
Identity = 149/222 (67.12%), Postives = 179/222 (80.63%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSIEGIRP 672
            +GP V+ L+EV A   EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE  +  P TV+ +  GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR  +LTRLLKDSLGGNCRTVMIANI  +  SFEET+NTLKYANRAKNIKT  TRN L+V +HISEYV+LI +LR EIT LK QL++ G    S   ++P
Sbjct:  211 RGPVVADLSEVVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVTHHISEYVSLIANLRQEITNLKTQLMQQGIPSPSAHDLKP 432
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A024TUT4_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUT4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 2.890e-84
Identity = 147/211 (69.67%), Postives = 175/211 (82.94%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
            KGP V+ L+E+ A   EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE  +  PG V+ +  GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR  +LTRLLKDSLGGNCRTVMIANI  +  SFEET+NTLKYANRAKNIKT  TRN L+VN+HISEYV+LI +LR EIT LK Q+ + G
Sbjct:  314 KGPLVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPGMVSVLKTGKLSMIDLAGSERAAVTQNRGLRLIEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKTQMTQQG 524
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A482S7X7_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X7_9ARCH)

HSP 1 Score: 269 bits (688), Expect = 8.300e-84
Identity = 142/184 (77.17%), Postives = 159/184 (86.41%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNY 558
            KGP V+ + E+EA + +E+M+LLHQGN  R+Q AT AN VSSRSHAVLQVVVE RD+APGTVA + +GKLSLVDLAGSERAA T+N G RL+EGANINRSLLALGNCINALGE+ NKG FVPYR  +LTRLLKDSLGGNCRTVMIANI AA +SFEETLNTLKYANRAKNIKTN  RN L+VNY
Sbjct:  207 KGPVVASITEIEATSGQEVMQLLHQGNAKRSQAATAANEVSSRSHAVLQVVVECRDRAPGTVANIKVGKLSLVDLAGSERAANTKNVGARLVEGANINRSLLALGNCINALGEKGNKGNFVPYRDSKLTRLLKDSLGGNCRTVMIANISAAESSFEETLNTLKYANRAKNIKTNVQRNVLNVNY 390
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: W4GMA4_9STRA (Kinesin-like protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMA4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.240e-83
Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
            KGP V+ L+E+ A   EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE  +  P TV  +  GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR  +LTRLLKDSLGGNCRTVMIANI  +  SFEET+NTLKYANRAKNIKT  TRN L+VN+HISEYV+LI +LR EIT LK Q+ + G
Sbjct:  287 KGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQMTQQG 497
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BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA)

HSP 1 Score: 279 bits (714), Expect = 5.940e-83
Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 1 
Query:   13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
            KGP V+ L+EV A   +E+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE  +  P TV  +  GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR  +LTRLLKDSLGGNCRTVMIAN+  +  SFEET+NTLKYANRAKNIKT  TRN L+VN+HISEYV+LI +LR EIT LK QL + G
Sbjct:  262 KGPIVADLSEVVASNADEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANVSMSVASFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLREEITNLKAQLQQQG 472
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ11_ECTSI4.390e-15665.58Kinesin motor domain-containing protein, putative ... [more]
F0Y736_AURAN3.860e-10053.13Kinesin-like protein n=1 Tax=Aureococcus anophagef... [more]
A0A7S2W525_9STRA5.060e-9475.36Kinesin-like protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3MBB8_9STRA2.520e-9056.15Kinesin-like protein (Fragment) n=1 Tax=Spumella e... [more]
W4GMD4_9STRA3.640e-8569.67Kinesin-like protein n=3 Tax=Aphanomyces astaci Ta... [more]
A0A1V9ZPN4_9STRA2.030e-8467.12Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
A0A024TUT4_9STRA2.890e-8469.67Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A482S7X7_9ARCH8.300e-8477.17Kinesin motor domain-containing protein (Fragment)... [more]
W4GMA4_9STRA3.240e-8369.67Kinesin-like protein n=5 Tax=Aphanomyces astaci Ta... [more]
A0A485KW97_9STRA5.940e-8369.67Kinesin-like protein n=1 Tax=Aphanomyces stellatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig976contigP-canaliculata_contig976:22759..28461 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.9
Seed ortholog evalue1.1e-132
Seed eggNOG ortholog2880.D8LJ11
KEGG koko:K10401
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0242@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons8
Model size1148
Cds size1146
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig976.23859.1prot_P-canaliculata_contig976.23859.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig976 22759..28461 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817339.311668-CDS-P-canaliculata_contig976:22758..228421622817339.311668-CDS-P-canaliculata_contig976:22758..22842Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 22759..22842 -
1693495233.016602-CDS-P-canaliculata_contig976:22758..228421693495233.016602-CDS-P-canaliculata_contig976:22758..22842Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 22759..22842 -
1622817339.3258977-CDS-P-canaliculata_contig976:23311..234071622817339.3258977-CDS-P-canaliculata_contig976:23311..23407Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 23312..23407 -
1693495233.0303056-CDS-P-canaliculata_contig976:23311..234071693495233.0303056-CDS-P-canaliculata_contig976:23311..23407Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 23312..23407 -
1622817339.3403687-CDS-P-canaliculata_contig976:26429..267181622817339.3403687-CDS-P-canaliculata_contig976:26429..26718Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 26430..26718 -
1693495233.0414882-CDS-P-canaliculata_contig976:26429..267181693495233.0414882-CDS-P-canaliculata_contig976:26429..26718Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 26430..26718 -
1622817339.3541007-CDS-P-canaliculata_contig976:26944..271691622817339.3541007-CDS-P-canaliculata_contig976:26944..27169Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 26945..27169 -
1693495233.05581-CDS-P-canaliculata_contig976:26944..271691693495233.05581-CDS-P-canaliculata_contig976:26944..27169Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 26945..27169 -
1622817339.3690994-CDS-P-canaliculata_contig976:27410..274751622817339.3690994-CDS-P-canaliculata_contig976:27410..27475Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 27411..27475 -
1693495233.0699837-CDS-P-canaliculata_contig976:27410..274751693495233.0699837-CDS-P-canaliculata_contig976:27410..27475Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 27411..27475 -
1622817339.38242-CDS-P-canaliculata_contig976:27705..278411622817339.38242-CDS-P-canaliculata_contig976:27705..27841Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 27706..27841 -
1693495233.0816152-CDS-P-canaliculata_contig976:27705..278411693495233.0816152-CDS-P-canaliculata_contig976:27705..27841Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 27706..27841 -
1622817339.3997257-CDS-P-canaliculata_contig976:28086..281781622817339.3997257-CDS-P-canaliculata_contig976:28086..28178Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 28087..28178 -
1693495233.0928617-CDS-P-canaliculata_contig976:28086..281781693495233.0928617-CDS-P-canaliculata_contig976:28086..28178Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 28087..28178 -
1622817339.411183-CDS-P-canaliculata_contig976:28302..284611622817339.411183-CDS-P-canaliculata_contig976:28302..28461Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 28303..28461 -
1693495233.1038554-CDS-P-canaliculata_contig976:28302..284611693495233.1038554-CDS-P-canaliculata_contig976:28302..28461Pelvetia canaliculata dioeciousCDSP-canaliculata_contig976 28303..28461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig976.23859.1

>prot_P-canaliculata_contig976.23859.1 ID=prot_P-canaliculata_contig976.23859.1|Name=mRNA_P-canaliculata_contig976.23859.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=382bp
MLAWKGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHA
VLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGAN
INRSLLALGNCINALGERSNKGQFVPYRQLTRLLKDSLGGNCRTVMIANI
CAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRS
EITRLKHQLVRGGRAGVSIEGIRPEVACVLFFQPYPDHRDKQRHMHGLLT
EELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVGFETGANGLDATA
CSTFAANTTEPSSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQNVQ
NSIEIGKRQLLLVEWHGGRELPQEAANDALQG
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mRNA from alignment at P-canaliculata_contig976:22759..28461-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig976.23859.1 ID=mRNA_P-canaliculata_contig976.23859.1|Name=mRNA_P-canaliculata_contig976.23859.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5703bp|location=Sequence derived from alignment at P-canaliculata_contig976:22759..28461- (Pelvetia canaliculata dioecious)
ATGCTCGCTTGGAAGGGCCCGACGGTGTCTGGTCTCGCCGAAGTGGAGGC
CCAAACCCCCGAGGAGATCATGGAACTCCTTCATCAAGGCAATCTTAGTC
GGACGCAGCAAGCTACGCGCGCCAATGCAGTTTCGTCACGCTCGCACGCG
GTACTTCAGGTAGGGGAGTGTTGACATCACTGGCGGTGCCTTTCAGGGAC
TCGTCCTTTCAGGTTTCTGTGACGCGTTCAATACATGCTTCAATCAGGCA
TATAATCCCACCTTTCCCTCCGACCGTCAACAGGTAGTGGTAGAGAGCCG
GGATAAGGCCCCAGGAACTGTCGCAACGATGCACATCGGAAAGCTTAGCT
TGGTCGACCTAGCTGGCAGCGAGAGGTATTGTACGACGACTGAAAAAGAC
TTGGGAACTCCAGCGACAGGGGAACTCCAAAAATAAAGCTATCGGATGAT
GATCAGAATTAATTCCAGGCAAATCACTCCCAGTTCCCATACTGGCTGGA
CCTTTCTCTAATGCGTCCGCGGTAATGGAGGAAGAGAGTGGTTTCAAGTC
ATGCAGCTAACAAGACCTCAACTACTATTTTCTACCACGCGCGTGTATGA
CGCGTTTGTTCACGAACAAGGGCGGCCGCCACGCGAAACAGGGGAGTAAG
GCTGATGGAAGGAGCCAACATCAACCGCTCCCTGCTGGCCTTGGGAAACT
GCATCAATGCTTTGGGGGAACGCAGCAACAAGGGTCAGTTCGTACCCTAC
AGGCAAGTTGATGCGCCTTATACAAAGGCATTTCCTGGAAACTTGTATGT
TGCACGTTCGGTCCTGTCAACTTTATGTCGCATCTGTAAGGAGCAGGCGC
GTCGGTGCGGTAGCATGGTGGTAACTATTTTCTCCGACTCGTTACTTTTG
GTTTGCCTCCTTGTTTATAAGTTTCTGTCTCTCTCTGCATTCGCCCCTCT
TGCCTTGTTCTTGTGGTCTATTTTAGAGATTCAAAGCTGACCCGCCTTTT
GAAGGACTCGCTTGGAGGTAACTGCAGGACCGTCATGATCGCCAATATTT
GGTGAGAATGCTAGGTACCTCGCGGAAACGCTGCTTTGTTTTCAGCGTGT
TAACGTTCGTCGGACGGGGCCTTGTGCTGACCTCAAGTTATGTCGCTCAT
GCTTGGATAGCTCTAGTGATCCAACCGCTAGAAACCGATTCAAAAATATG
TCATCTGCCTTTGGTGCACCTCGATCTCGACGGTACAACCAAGCGCATCA
TTCACTGCGCCGGGTTGTCACTGGTTCCTACGCCACGTTCAGCGCGGCTG
CCACGTCCTTCGAGGAGACTCTCAACACGTTAAAGTATGCAAATCGTGCG
AAAAATATCAAAACCAACGCCACCCGCAACTCCCTGGACGTCAATTACCA
CATCTCGGAGTATGTGAATCTAATCGGCAGCTTGCGGTCCGAGATCACCA
GACTCAAGCACCAGCTTGTGAGGGGGGGGCGGGCTGGTGTCAGCATTGAG
GGCATACGACCCGAGGTGTGAATCCTCTCGCGAGGAAACGTACCCAATGT
TGAAGAGTCAAACTTGTATTTTATGGGAAAGAAAAGTTGAATTTAGGCGC
GGACGATGCTCAAAGAAGTATCTAGCACCTTGAAACCTTGGTCGGAGAAA
TATTCGTTATATTCGTTATCCGCTTGAGCGCCACAAATGATCTCCAAATC
GCGCTGCACTGCACTGCACTGCACTGCACTGCGCTAATTGCAGTGCGTGC
GTGCTGTTTTTCCAACCCTACCCTGATCATCGAGACAAGCAACGCCACAT
GCACGGCCTACTCACAGAAGAGCTGGAAATTGGGGGAAAGTGGAGCGGAA
GAGCACATAGAAACGGCGCCGCGGGAGAAATGACGACTGGGCCGTCGACG
CCGGCGGGAAATATGACCAGGACTGTAGGCTTCGAGACGGGAGCAAACGG
TCTGGACGCAACCGCCTGTTCCACGTTCGCTGCCAACACGACAGAGCCGT
CCTCGACCAAGGACAGGGACTTCGTTGAAGAGGTAGGTGTGGTGATATAT
CGCTGTAAGACAAAATACGAAGTGCTTAGGAGGGCTGGGGGGGCTATAGT
GCAATAATTCCTACGGCTGACGGCTGCACACAAGTGACAGAATTCTAGCG
GGTGAGCGGTCTACTACTGTCGGATATAAGTTTAATGTTTCTCGCGACAT
TTCATTCGTTAGAGCAGGGCATCCGACGGCGCAATGACGCCGTTGAGACT
AGAAGCACCCATGATGCTCTACCACGGAAAATAGCATTATTTGCCCCGGG
TGTAAAACTCTTGCCGCTCGGGTATTTAGTCCAGGAGAATTTTTATAAAG
ACATTTGAGGCCCTTTTTCTCGATGCCGTGCGCGTTTTTGGCGTGCTGTT
GATCTAATTTTGCCGTATTCGGTTACTTCTGTTACAGCAAAGGGTGCGTT
ATTTATGTTGGATTGCTCTATCGTAAGATTGGGTGGCCATCTTGAGGACT
TGGATCATGCTCCTCGTTATTCCCATGAAGCGTAATTCTTTATCCAGCGT
GTATATCGGTTTCATCATGTATCCGCGTTCTATTAGTCTATCTCTATTCT
ACATGGGACTTATCTGGTATACATCTCCTCCGGACTTAACGCCCCTGCCA
CCACGTGAGTGCTCCACACTCCCCCATGTCAGACCTGGCCACGCCCGAAT
TTTCAATCACGCTAGCGTCGTCGAACGATCTGGATTTGGGGGCTGAAGGT
CTTGAGTCATTCGGCACTTTTAAGTGTACCTGGAGTGTGAACAAACTAGT
TTGATGTGGGGTATGGTACGTTACAAAGCGCGACCGCGAAGGGGTGTTTC
GATGGGGCATCTTTTCCGAAAAAGCACTGTTACATTCCCACGATGGAGTC
AAGATAGCAATGTTATTCCTGGGGAGCTGGGTCGGAGCAATATTGTGAAG
GCAAAAGACGACAATGGCGGCTGTGGGACGAGTTTAGGAGGAGAGGGGTA
CTTTGGTGGCAAGGCAAAACTTTCTGAGGGCTCGACGCGTTTTCCAAAAC
GAAACCGAGAACATCGTGCGACGAGCTGCCCATTGATTACGAACGAAGCC
TTGGACGTTCAGCTGGTCAAATACATCGAATTCAGCTGTACGGGCCGAAC
ATATCTCTCGCTGTCTGCTGTTTTCCTCATTGAGACTGTTTTTATAGTTT
GGAGGAGTATTTCGTTGTTCGCCGAGCTTCATTCCTAGACGCCCTCGCGT
AACGGCATAGATTAGCCTTGTTTTGTCAAGATGTTGACCGACTGTACGTA
ACGCGTTCTCAATTGAGGTAAATATTTGCTTCGTGCGCGTACCGGCGTAC
ATGACAGGCGACTTCGTGTTTTTGGTCTTTTGTGGTGATTATTCCTCGGG
ATTTCCCTCACTGTGGGCGAAATTAGTCAGAAATGATGGATGAGATAATA
GTCGACTTTGAAGATCCTCGTGACCTTGCGGCGATCTGTTCCCGAATTTA
TCTTCTACTTTTTTTAAGCTTTCAACAGGTGGTGTCTGTACCATGAGTCA
AGGGCGCATAAACGCTGATACTATTGATTACGCGCTCGAAGGAACTCACG
ATCGTTTTGTCGATTTATCGGCGTCTTTTTTTGTTTCTTCTGGTGTAAAT
ATCCTGTTGTCGCTTTTATCGGCGTCGTTTTTTTCCTCTGGGGTGTATAT
ATCCTGATGTCGCCGTAAGTAGGTAAACGAGAATATTGTTATGATCTGAA
ACTGTCACAATAGCAATGAACCCTTGAGATTCGTTATAATCAACCATTTG
AGTTTACGATGAAGATGCTTTATTACGGTATTTTCCCTACCGGAAAATCG
AAGCTGTTGTTTGACGATTTGAGACGAAGCAGAAATAGAGCCTATTATAC
AAGCAGTGTACAAGAAATTGAATGTTCGGACGCGAAAACTTCCCCGATAC
TCGGTCAAAGATGACGACTGAGATTTTGAGTCACAAATCGTCCGGTTGAG
TATCTCCCGATTATGAGTAAAACACATTTTTTCTTTCTCCTATGAATACA
ACAGGTAGCTCCTGACAGAAATCACTGGGTTGAGAACCCGTTTTCTTAAT
TAGTACTCAAAAGAGCCGAGTGCGAAATCTTGAATCACTTGGCAGATAGA
TGTCGATAGGAATATCGCCTTGGAAATAATGCACCTCTTGTGATGAAACA
CTTCTTGACCACCGTTTGCCGAGGGAGCCGCCCAGGGAATCGTGTTGGAC
GAGGCGACTCTGTTGGACTGCCTCGCAATCTCCTGGAGTCACAAGTGGAT
GTTAAGTTTGGATGTTTTTGCACCGAAATTACAGGTTTCGGTTTTCCTTC
CAGGATTTTCAGGTGTCGTGATCTCGTTCGATTGCCCTGTCATGGTAACC
AGCTGTCATTGTAATCAGATCTTGTTCGTCTCAATCCTATGATAGGGTAG
CCCGCCGTGTGTGTTGTCTTTTGTTGACTGAATAGCGCTCAAGCACAGTA
TAAAACGTTCACCTTCGAGGAGTTAAGGCTGTTCCTTTTGGTCTGATGTC
CTTTGGGAAAAGGAAAGCAGTTTTTCAATGAGCAGTTCTTACGGAAGGAA
GCCCGATTCCCTAGAAGTCAACTTGCTTTTAGTTATGACACATATACTAA
ACCGGGGACCATAGAGCTAAAATCACATTTGCTGTTGACGACCGAACGGA
CCGAAGGAGGGCTGGTGTTGCAGGAAAGGAACATATTGTGACGTTATGTT
GCTCTATTTATTATAGAATTGTATAACTATCTAGGAGAGGGAATAGCTTG
GTCCCCGTTCTCTTCATCCCGAGGACCGCACTTACAGTATTGCTCTGTGA
ATATAATATATCCACGTTCCATCCATAAATATATCTTCTCTTCAGGTGAA
CTACGCGTATGTAGTATAAATCTTCGGGTTTGTTGTCTCCGCCGCCACGT
GAGCACCCAATACTACCATCCCGCCTAAGATCTGGCTCCAATCTCCGACC
CACTACCACCCGCAAATAACATGTGTTCCTCCGCACCATCATGGATGAGA
ATAGGTTCGGAGGAAGATAGTGGAAAACTTCCGTGAGAGAATGCAGCTGC
GGCGGTCGCTCGTCGAACTGGAGGATCAAAACGTTCAGAATAGCATCGAG
GTGGGTACGTGGACCCGTAATTAAATTTTGTCGCTTTCTCAAGGAGGGAC
TGCTGCAGAACGTCACGGATATCGGTGGTAGCGCCGGTGACAAACATGAC
CTAGGCTAGTGTTGGTAGGCCGTCGTCAGTCAACCTCCACTTTGAAAAGG
GTTACTGCCGTAGGTGACATTCCAAGCGCGAGAGACTAAGATAAGTTACT
CAGCGAGTCAGCGCTGTATCTACAATATGTGAAGATCAGTACAAAGTTGG
GCTGACGATTTCCTAACGAGGCGGGTGGGGCTGACACTGTTGGTTGAGGC
GGCGATATACTCTTAATAAATCGCTCAATAGCGCATCACGTGATGATTTT
TAACTCCGTACTCGTACGGCAATGTTTTGAGAATGACGTCTGACGTTTTC
CACACTACAAACAGCTTACGAGTCGTGGGATGTTTGTCGATACTCAACAA
TGTGTCGTCCAACAAGCAGATAGGGAAAAGGCAGTTGCTGCTTGTGGAGT
GGCATGGCGGAAGAGAGCTTCCCCAGGAGGCCGCCAACGACGCCTTACAA
GGC
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Coding sequence (CDS) from alignment at P-canaliculata_contig976:22759..28461-

>mRNA_P-canaliculata_contig976.23859.1 ID=mRNA_P-canaliculata_contig976.23859.1|Name=mRNA_P-canaliculata_contig976.23859.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2292bp|location=Sequence derived from alignment at P-canaliculata_contig976:22759..28461- (Pelvetia canaliculata dioecious)
ATGCTCGCTTGGAAGGGCCCGACGGTGTCTGGTCTCGCCGAAGTGGAGGC
CCAAACCCCCGAGGAGATCATGGAACTCCTTCATCAAGGCAATCTTAGTC
GGACGCAGCAAGCTACGCGCGCCAATGCAGTTTCGTCACGCTCGCACGCG
GTACTTCAGATGCTCGCTTGGAAGGGCCCGACGGTGTCTGGTCTCGCCGA
AGTGGAGGCCCAAACCCCCGAGGAGATCATGGAACTCCTTCATCAAGGCA
ATCTTAGTCGGACGCAGCAAGCTACGCGCGCCAATGCAGTTTCGTCACGC
TCGCACGCGGTACTTCAGGTAGTGGTAGAGAGCCGGGATAAGGCCCCAGG
AACTGTCGCAACGATGCACATCGGAAAGCTTAGCTTGGTCGACCTAGCTG
GCAGCGAGAGGTAGTGGTAGAGAGCCGGGATAAGGCCCCAGGAACTGTCG
CAACGATGCACATCGGAAAGCTTAGCTTGGTCGACCTAGCTGGCAGCGAG
AGGGCGGCCGCCACGCGAAACAGGGGAGTAAGGCTGATGGAAGGAGCCAA
CATCAACCGCTCCCTGCTGGCCTTGGGAAACTGCATCAATGCTTTGGGGG
AACGCAGCAACAAGGGTCAGTTCGTACCCTACAGGCAAGGCGGCCGCCAC
GCGAAACAGGGGAGTAAGGCTGATGGAAGGAGCCAACATCAACCGCTCCC
TGCTGGCCTTGGGAAACTGCATCAATGCTTTGGGGGAACGCAGCAACAAG
GGTCAGTTCGTACCCTACAGGCAACTGACCCGCCTTTTGAAGGACTCGCT
TGGAGGTAACTGCAGGACCGTCATGATCGCCAATATTTGCTGACCCGCCT
TTTGAAGGACTCGCTTGGAGGTAACTGCAGGACCGTCATGATCGCCAATA
TTTGCGCGGCTGCCACGTCCTTCGAGGAGACTCTCAACACGTTAAAGTAT
GCAAATCGTGCGAAAAATATCAAAACCAACGCCACCCGCAACTCCCTGGA
CGTCAATTACCACATCTCGGAGTATGTGAATCTAATCGGCAGCTTGCGGT
CCGAGATCACCAGACTCAAGCACCAGCTTGTGAGGGGGGGGCGGGCTGGT
GTCAGCATTGAGGGCATACGACCCGAGGTCGCGGCTGCCACGTCCTTCGA
GGAGACTCTCAACACGTTAAAGTATGCAAATCGTGCGAAAAATATCAAAA
CCAACGCCACCCGCAACTCCCTGGACGTCAATTACCACATCTCGGAGTAT
GTGAATCTAATCGGCAGCTTGCGGTCCGAGATCACCAGACTCAAGCACCA
GCTTGTGAGGGGGGGGCGGGCTGGTGTCAGCATTGAGGGCATACGACCCG
AGGTTGCGTGCGTGCTGTTTTTCCAACCCTACCCTGATCATCGAGACAAG
CAACGCCACATGCACGGCCTACTCACAGAAGAGCTGGAAATTGGGGGAAA
GTGGAGCGGAAGAGCACATAGAAACGGCGCCGCGGGAGAAATGACGACTG
GGCCGTCGACGCCGGCGGGAAATATGACCAGGACTGTAGGCTTCGAGACG
GGAGCAAACGGTCTGGACGCAACCGCCTGTTCCACGTTCGCTGCCAACAC
GACAGAGCCGTCCTCGACCAAGGACAGGGACTTCGTTGAAGAGTGCGTGC
GTGCTGTTTTTCCAACCCTACCCTGATCATCGAGACAAGCAACGCCACAT
GCACGGCCTACTCACAGAAGAGCTGGAAATTGGGGGAAAGTGGAGCGGAA
GAGCACATAGAAACGGCGCCGCGGGAGAAATGACGACTGGGCCGTCGACG
CCGGCGGGAAATATGACCAGGACTGTAGGCTTCGAGACGGGAGCAAACGG
TCTGGACGCAACCGCCTGTTCCACGTTCGCTGCCAACACGACAGAGCCGT
CCTCGACCAAGGACAGGGACTTCGTTGAAGAGGTTCGGAGGAAGATAGTG
GAAAACTTCCGTGAGAGAATGCAGCTGCGGCGGTCGCTCGTCGAACTGGA
GGATCAAAACGTTCAGAATAGCATCGAGGTTCGGAGGAAGATAGTGGAAA
ACTTCCGTGAGAGAATGCAGCTGCGGCGGTCGCTCGTCGAACTGGAGGAT
CAAAACGTTCAGAATAGCATCGAGATAGGGAAAAGGCAGTTGCTGCTTGT
GGAGTGGCATGGCGGAAGAGAGCTTCCCCAGGAGGCCGCCAACGACGCCT
TACAAGGCATAGGGAAAAGGCAGTTGCTGCTTGTGGAGTGGCATGGCGGA
AGAGAGCTTCCCCAGGAGGCCGCCAACGACGCCTTACAAGGC
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