mRNA_P-canaliculata_contig976.23859.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: D8LJ11_ECTSI (Kinesin motor domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ11_ECTSI) HSP 1 Score: 474 bits (1221), Expect = 4.390e-156 Identity = 282/430 (65.58%), Postives = 318/430 (73.95%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSI------EGIRPEVACVLFFQP---------YPDHRDKQRHMHGLLTEELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVG----FETGA------------------NGLD-ATACSTFAANTTEP------------SSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQNVQNSIEIGKRQLLLVEWHGGRELPQEAANDALQG 1146
KGPTVSGLAEVEA+TPEEIM+LLHQGN SRTQQATRANA SSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAAT+NRGVRL+EGANINRSLLALGNCINALGER NKGQFVPYR +LTRLLKDSLGGNCRTVMIANI A++SFEETLNTLKYANRAKNIKTNATRNSLDVN+HISEYVNLIGSLR+EITRLKHQLVRGGR+G + +G+ + + F P + D+Q+ + G +E+ +G + R A + + S+P+ +T VG + GA NG+D A A + P SS +DRDFVEEVR KIVENFRERMQLRRSL+ELEDQNVQNSIE+GKRQL LVEWHGGR LPQEAA+DAL+G
Sbjct: 136 KGPTVSGLAEVEARTPEEIMDLLHQGNQSRTQQATRANAASSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATQNRGVRLVEGANINRSLLALGNCINALGERGNKGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISGASSSFEETLNTLKYANRAKNIKTNATRNSLDVNHHISEYVNLIGSLRTEITRLKHQLVRGGRSGGGVGTGAGGDGVGSSRSEAMVFSPSLKASTNSLFAPADDEQQELRGSRGKEI------TGSSER---ASLLLSPSSSPSAKLTNDVGSVGGVDAGAGSMMEAVDGAAGSGTSSRNGIDLAMVAGVRDAPASSPPVSMADGEGAVVSSPQDRDFVEEVREKIVENFRERMQLRRSLIELEDQNVQNSIEVGKRQLSLVEWHGGRRLPQEAASDALRG 556
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: F0Y736_AURAN (Kinesin-like protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y736_AURAN) HSP 1 Score: 317 bits (813), Expect = 3.860e-100 Identity = 195/367 (53.13%), Postives = 237/367 (64.58%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSIEGIRPEVACVLFFQPYPDHRDKQRHMHGLLTEELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVGFETGANGLDATACSTFAANTTEPSSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQNVQNSIEIGKRQLLLVEWHGGR 1107
KGP V+G+ E+EA + E+M LL +GN R+Q AT AN VSSRSHAVLQ+ VE+R++A GT A + IGKLSLVDLAGSERAA T+NRG RL EGANINRSLL LGNCINALG++SN+GQFVPYR +LTRLLKDSLGGNCRTVMIANI A+ SFEETLNTLKYANRAKNIKT+ RN L+VN+HISEYV+LI +LR+E+T LK QL S G P G + E+L + LDA S A P + D+ ++E++ + ENFRERMQLRR+L+ELEDQNVQNSIEIGKRQ+++ +W+ R
Sbjct: 186 KGPVVAGITEIEANSATEVMALLQRGNAKRSQHATAANEVSSRSHAVLQITVETREQAEGTRAAIQIGKLSLVDLAGSERAANTKNRGDRLKEGANINRSLLTLGNCINALGDKSNRGQFVPYRDSKLTRLLKDSLGGNCRTVMIANISASNASFEETLNTLKYANRAKNIKTDVKRNVLEVNHHISEYVSLIQNLRNEVTVLKQQLAN------STTG--------------PG---------GAVLEDLPLDAL-------------------------------------LDAPRASAPARVAKTPGA--DKAALKEMKAWMQENFRERMQLRRTLIELEDQNVQNSIEIGKRQIIVADWNASR 484
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A7S2W525_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W525_9STRA) HSP 1 Score: 291 bits (745), Expect = 5.060e-94 Identity = 156/207 (75.36%), Postives = 178/207 (85.99%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQL 627
+GPTV+G+ EVE + EIM+LLH+GN +R+Q T AN VSSRSHAVLQVVVE+R+KA G VA + IGKLSLVDLAGSERAAAT+NRGVRL EGANINRSLLALGNCINALGE+ NKG FVPYR +LTRLLKDSLGGNCRTVMIANI ++ +SFEETLNTLKYANRAKNIKT RN + VN+HISEYV+LI +LRSEI+ LK QL
Sbjct: 25 RGPTVTGITEVEVASAVEIMDLLHRGNRNRSQHPTAANEVSSRSHAVLQVVVENREKAEGAVAKIKIGKLSLVDLAGSERAAATKNRGVRLQEGANINRSLLALGNCINALGEKGNKGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISSSVSSFEETLNTLKYANRAKNIKTTVQRNVVSVNHHISEYVSLIENLRSEISSLKTQL 231
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A7S3MBB8_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBB8_9STRA) HSP 1 Score: 282 bits (721), Expect = 2.520e-90 Identity = 178/317 (56.15%), Postives = 210/317 (66.25%), Query Frame = 1 Query: 100 RTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSIEGIRPEVACVLFFQPYPDHRDKQRHMHGLLTEELEIGGKWSGRAHRNGAAGEMTTGPSTPAGNMTRTVGFETGANGLDATACSTFAANTTEPSSTKDRDFVEEVRRKIVENFRERMQLRRSLVELEDQN 1044
R+Q AT AN VSSRSHAVLQV+VE+RD+APGTVA + +GKLSLVDLAGSERAA T+N G RL+EGANINRSLLALGNCINALGE+ NKG FVPYR +LTRLLKDSLGGNCRTVMIANI +A +SFEETLNTLKYANRAKNIKT+ RN L+VNYHISEYV LI +LR EI LK Q+ G + V D+ H L GG+ RAH A GP +P ++ G +T + + + R+ V +R++IVENF+ERMQLRRSL+ELEDQN
Sbjct: 3 RSQAATAANEVSSRSHAVLQVIVENRDRAPGTVANIKLGKLSLVDLAGSERAANTKNVGARLVEGANINRSLLALGNCINALGEKGNKGNFVPYRDSKLTRLLKDSLGGNCRTVMIANISSAESSFEETLNTLKYANRAKNIKTHVQRNVLNVNYHISEYVQLIDNLRGEIQILKSQI---GSSNV----------------------DRVATSHADLRSR---GGRSPIRAHSPQA------GPRSPMHHLP--------GRGQPSTPFQALRESMRSGAGGEGRELVNNMRQRIVENFQERMQLRRSLIELEDQN 277
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: W4GMD4_9STRA (Kinesin-like protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMD4_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.640e-85 Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
KGP V+ L+E+ A EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE + P TV + GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR +LTRLLKDSLGGNCRTVMIANI + SFEET+NTLKYANRAKNIKT TRN L+VN+HISEYV+LI +LR EIT LK Q+ + G
Sbjct: 287 KGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQMTQQG 497
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A1V9ZPN4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPN4_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.030e-84 Identity = 149/222 (67.12%), Postives = 179/222 (80.63%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGGRAGVSIEGIRP 672
+GP V+ L+EV A EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE + P TV+ + GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR +LTRLLKDSLGGNCRTVMIANI + SFEET+NTLKYANRAKNIKT TRN L+V +HISEYV+LI +LR EIT LK QL++ G S ++P
Sbjct: 211 RGPVVADLSEVVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEVTPDTVSVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVTHHISEYVSLIANLRQEITNLKTQLMQQGIPSPSAHDLKP 432
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A024TUT4_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUT4_9STRA) HSP 1 Score: 280 bits (717), Expect = 2.890e-84 Identity = 147/211 (69.67%), Postives = 175/211 (82.94%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
KGP V+ L+E+ A EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE + PG V+ + GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR +LTRLLKDSLGGNCRTVMIANI + SFEET+NTLKYANRAKNIKT TRN L+VN+HISEYV+LI +LR EIT LK Q+ + G
Sbjct: 314 KGPLVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPGMVSVLKTGKLSMIDLAGSERAAVTQNRGLRLIEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKTQMTQQG 524
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A482S7X7_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X7_9ARCH) HSP 1 Score: 269 bits (688), Expect = 8.300e-84 Identity = 142/184 (77.17%), Postives = 159/184 (86.41%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNY 558
KGP V+ + E+EA + +E+M+LLHQGN R+Q AT AN VSSRSHAVLQVVVE RD+APGTVA + +GKLSLVDLAGSERAA T+N G RL+EGANINRSLLALGNCINALGE+ NKG FVPYR +LTRLLKDSLGGNCRTVMIANI AA +SFEETLNTLKYANRAKNIKTN RN L+VNY
Sbjct: 207 KGPVVASITEIEATSGQEVMQLLHQGNAKRSQAATAANEVSSRSHAVLQVVVECRDRAPGTVANIKVGKLSLVDLAGSERAANTKNVGARLVEGANINRSLLALGNCINALGEKGNKGNFVPYRDSKLTRLLKDSLGGNCRTVMIANISAAESSFEETLNTLKYANRAKNIKTNVQRNVLNVNY 390
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: W4GMA4_9STRA (Kinesin-like protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMA4_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.240e-83 Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
KGP V+ L+E+ A EE+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE + P TV + GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR +LTRLLKDSLGGNCRTVMIANI + SFEET+NTLKYANRAKNIKT TRN L+VN+HISEYV+LI +LR EIT LK Q+ + G
Sbjct: 287 KGPVVADLSEIVASNAEEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANISMSVLSFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLRQEITNLKAQMTQQG 497
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA) HSP 1 Score: 279 bits (714), Expect = 5.940e-83 Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 1 Query: 13 KGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAVLQVVVESRDKAPGTVATMHIGKLSLVDLAGSERAAATRNRGVRLMEGANINRSLLALGNCINALGERSNKGQFVPYR--QLTRLLKDSLGGNCRTVMIANICAAATSFEETLNTLKYANRAKNIKTNATRNSLDVNYHISEYVNLIGSLRSEITRLKHQLVRGG 639
KGP V+ L+EV A +E+M LL +GN +R+Q+AT ANAVSSRSHAVLQV VE + P TV + GKLS++DLAGSERAA T+NRG+RL+EGANINRSLLALGNCINALGE++N+G FVPYR +LTRLLKDSLGGNCRTVMIAN+ + SFEET+NTLKYANRAKNIKT TRN L+VN+HISEYV+LI +LR EIT LK QL + G
Sbjct: 262 KGPIVADLSEVVASNADEVMRLLRRGNKNRSQEATAANAVSSRSHAVLQVSVEQTEATPDTVTVLKTGKLSMIDLAGSERAAVTQNRGLRLLEGANINRSLLALGNCINALGEKANRGAFVPYRDSKLTRLLKDSLGGNCRTVMIANVSMSVASFEETVNTLKYANRAKNIKTTVTRNVLNVNHHISEYVSLIANLREEITNLKAQLQQQG 472 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig976.23859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig976.23859.1 >prot_P-canaliculata_contig976.23859.1 ID=prot_P-canaliculata_contig976.23859.1|Name=mRNA_P-canaliculata_contig976.23859.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=382bp MLAWKGPTVSGLAEVEAQTPEEIMELLHQGNLSRTQQATRANAVSSRSHAback to top mRNA from alignment at P-canaliculata_contig976:22759..28461- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig976.23859.1 ID=mRNA_P-canaliculata_contig976.23859.1|Name=mRNA_P-canaliculata_contig976.23859.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5703bp|location=Sequence derived from alignment at P-canaliculata_contig976:22759..28461- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig976:22759..28461- >mRNA_P-canaliculata_contig976.23859.1 ID=mRNA_P-canaliculata_contig976.23859.1|Name=mRNA_P-canaliculata_contig976.23859.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2292bp|location=Sequence derived from alignment at P-canaliculata_contig976:22759..28461- (Pelvetia canaliculata dioecious)back to top |