mRNA_P-canaliculata_contig976.23857.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: D8LJ13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ13_ECTSI) HSP 1 Score: 548 bits (1411), Expect = 2.400e-176 Identity = 269/374 (71.93%), Postives = 314/374 (83.96%), Query Frame = 3
Query: 555 KRPKMAGKGYEDVNEIGRDVATLGFMGIENIHYVRDSLASFCSAAQTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLKAAYAVAGRRQTASLAALAWVSLVSTAVVAVVRD-YGLDVDRELRSFAGGLAFSALLVLLLWSVPPSAFAPR 1673
K ++ GKGYEDVN+IGRDV TLGFMGIENIH VRDSLASFC+A+Q GQ+++HAVGASGWLRHLSQI+K AAFVVDELQRG+AVLVHCSDGWDRTAQLT LAQL +DPYYRTLEGFEVLVEKEWCSFGHMFGLR HSDSPTESSPVFLQWLDAVWQ++RQYPSSFEFTGHYLERLVEGVYSA FLNFAGNCERER+E+L++L+ G GA+S+F+YLRE+ EG +TAP++NPLYRPP LGGG G + R VDVLRPCCELQGLE W+ VYMRD L++HHRE+QLSVEQGLRLQVA L+A+ + RRQ A+L+ LA +++ + VVR YG D ++ SFA GLA + + LL+WS+P AF PR
Sbjct: 614 KANQVTGKGYEDVNDIGRDVCTLGFMGIENIHAVRDSLASFCAASQAQGQEYFHAVGASGWLRHLSQIMKGAAFVVDELQRGIAVLVHCSDGWDRTAQLTALAQLYMDPYYRTLEGFEVLVEKEWCSFGHMFGLRAHSDSPTESSPVFLQWLDAVWQLVRQYPSSFEFTGHYLERLVEGVYSAGFLNFAGNCERERKEKLKELRETGSGALSLFTYLREHAMEGTMTAPLLNPLYRPPPYTLGGGGGGRVPALRAVDVLRPCCELQGLEVWKTVYMRDNLLLHHREQQLSVEQGLRLQVAMLRASRVASDRRQRATLSVLALIAVAVAVLAWVVRGVYGYD-HGDVPSFALGLAVAVVPALLVWSLPQPAFEPR 986
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A6H5L4I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I2_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 2.030e-150 Identity = 233/300 (77.67%), Postives = 265/300 (88.33%), Query Frame = 3
Query: 564 KMAGKGYEDVNEIGRDVATLGFMGIENIHYVRDSLASFCSAAQTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLK 1463
++ GKGYEDVN+IGRDV TLGFMGIENIH VRDSLA+ C+A+Q GQ+++HAVGASGWLRHLSQI+K AAFVVDELQRG+AVLVHCSDGWDRTAQLT AQLC+DPYYRTLEGFEVLVEKEWCSFGHMFGLR HSDSPTESSPVFLQWLDAVWQ++ QYPSSFEFTGHYLERLVEGVYSA FLNFAGNCERER+E+L++L+ G GA+S+F+YLRE+ EG +TAP++NPLYRPP LG G G + R VDVLRPCCELQGLE W+ VYMRD L++HHRE+QLSVEQGLRLQ + K
Sbjct: 635 QVTGKGYEDVNDIGRDVCTLGFMGIENIHAVRDSLAALCAASQAQGQEYFHAVGASGWLRHLSQIMKGAAFVVDELQRGIAVLVHCSDGWDRTAQLTAFAQLCMDPYYRTLEGFEVLVEKEWCSFGHMFGLRAHSDSPTESSPVFLQWLDAVWQLVGQYPSSFEFTGHYLERLVEGVYSAGFLNFAGNCERERKEKLKELRETGSGALSLFTYLREHAMEGTMTAPLLNPLYRPPPYTLGSGGGGRVPALRAVDVLRPCCELQGLEVWKTVYMRDNLLLHHREQQLSVEQGLRLQAYDYK 934
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A8K1C344_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C344_PYTOL) HSP 1 Score: 226 bits (576), Expect = 3.020e-57 Identity = 136/354 (38.42%), Postives = 201/354 (56.78%), Query Frame = 3
Query: 555 KRPKMAGKGYEDVNEIGRD---VATLGFMGIENIHYVRDSLASFCSAA-QTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLKAAYAVAGRRQTASLAALAWVSLVSTAVVAVVRDYGLDVDRELRSFAG 1604
K +AGKG+E V + RD ++ FMGI+NIH VR+S A + +F+ AV S WL ++ I++ A+ V + L+RG AV+VHCSDGWDRTAQL+ LAQL LDPY+RTLEGF +LVEK+WCSFGHMF R + ++SP+F Q+LDAV+Q+ Q+P+ F+F +L + E VYS+ + F N ER+RR L ++ +VSI+ +R + T +NPL+ G G GDG AR +L P C ++ ++ W + Y + + ++++L + Q +R Q L YAV Q L A+ + + ++ R LD + RS G
Sbjct: 706 KSNALAGKGHESVKQYDRDGVPTTSITFMGIDNIHAVRNSFVGLTQALYEVEDSNFFGAVQKSHWLEYVCSILQGASEVANHLERGDAVVVHCSDGWDRTAQLSSLAQLMLDPYFRTLEGFAILVEKDWCSFGHMFKKRCGHPTSDQTSPIFQQFLDAVYQLTVQFPTHFQFNELFLSSISEAVYSSWYGTFQMNSERDRRAFLVNVP-----SVSIWDVIRAS------TDQYLNPLFNG-----GDGYGDGSGGARMEPML-PVCRVRMMQLWCSQYQKAISHMRVQQRELEMLQLIRQQETELSRVYAVMNADQRLELRAIQ----LRADIASLARSMNLDYPEDDRSSNG 1038
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: UPI0002657015 (myotubularin-related protein 6 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657015) HSP 1 Score: 216 bits (549), Expect = 1.090e-55 Identity = 126/306 (41.18%), Postives = 177/306 (57.84%), Query Frame = 3
Query: 564 KMAGKGYEDVNEIGRDVATLGFMGIENIHYVRDSLASFCSAAQ---TPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLR---VHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLK 1463
+MAGKG+E +E+ + A F IENIH +R SL+ AA+ T F + +SGWL+H+ ++++A FV ++Q G++V+VHCSDGWDRTAQ LA L LDPYYRT++GF++L+EK+W SFGH F R + SDS E +P+F Q++DAVWQ+M+Q+P+ FEF +L + + YSA F F GNCE++RRE DL S++ YL NI+ NPLY + + T VL PC QG+ WR +Y R VH RE + LR ++K
Sbjct: 250 RMAGKGFE--SEMFYENAKFQFYAIENIHVMRASLSKLLDAAEMRTTNYGAFLATLESSGWLKHIRAVLETANFVSRQIQFGISVVVHCSDGWDRTAQTCALASLLLDPYYRTIKGFQMLIEKDWLSFGHKFIDRCGFIQSDSK-EVAPIFTQFIDAVWQLMQQFPAQFEFNERFLIIVHDHAYSAQFGTFVGNCEKDRREL--DLSST---TYSLWGYLANNISS------FRNPLYT--------------KDSTTPAVLEPCLSSQGVRYWRGMYNRFEAGVHPREPTGDLLSALRDHTLSMK 527
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A662XXF1_9STRA (Phosphatidylinositol-3-phosphatase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXF1_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.290e-55 Identity = 132/313 (42.17%), Postives = 180/313 (57.51%), Query Frame = 3
Query: 555 KRPKMAGKGYEDVNEIGRD---VATLGFMGIENIHYVRDSLASFCSAA-QTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGL--RLQVANLKAAYA 1475
K +AGKG+E V + RD A + FMGI+NIH VR+SLA A + +F+ AV S WL H+ I++ A+ V L+RG AVLVHCSDGWDRTAQL LAQ+ LDPYYRTLEGF +L+EKEWCSFGHMF R + ++SP+FLQ++DAV+Q+ Q+P+ F+F L + E VYS+ + F N E ER E L + +VS++ +R T +NPL+ G G G G A ++ + P C ++ ++ W + Y + I H R +Q E L R Q A L YA
Sbjct: 698 KSNALAGKGHESVKQYDRDGVPTAAITFMGIDNIHVVRNSLAGLAQALYEVEDSNFFGAVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLAALAQIMLDPYYRTLEGFAILIEKEWCSFGHMFQKRCGHPTSDQTSPIFLQFIDAVYQLTLQFPTHFQFNELLLASVAEAVYSSWYGTFQKNSECERVEFLSTVT-----SVSVWDVIRAT------TDQFLNPLFAG-----GEGQGMGTAGAVYMEPMLPVCRVRVMQLWCSQYQKA--IGHMRLQQREFEMLLLIRQQEAELSRLYA 992
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A484EA37_BRELC (Protein-tyrosine-phosphatase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA37_BRELC) HSP 1 Score: 219 bits (559), Expect = 3.710e-55 Identity = 126/323 (39.01%), Postives = 182/323 (56.35%), Query Frame = 3
Query: 555 KRPKMAGKGYEDVNEIGRD---VATLGFMGIENIHYVRDSLASFCSAAQT-PGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLKAAYAVAGRRQTASLAA 1511
K +AGKG+E V + RD A + FMGI+NIH VR+SLA A +F+ AV S WL H+ I++ A+ V L+RG AVLVHCSDGWDRTAQL+ LAQ+ LDPYYRTLEGF +L+EK+WCSFGH F R + ++SP+FLQ++DAV+Q+ Q+P+ F+F L + E VYS+ + F N E ERR L + +VS+++ +R T +NPL+ G S T++ + P C ++ ++ W Y + + ++++ + Q +R Q A+L YA Q L A
Sbjct: 647 KSNALAGKGHESVRQYDRDGTSTAAITFMGIDNIHVVRNSLAGLAQALYVVEDSNFFGAVQKSRWLEHICNILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQIMLDPYYRTLEGFAMLIEKDWCSFGHNFQKRCSHPTSDQTSPIFLQFIDAVYQLTLQFPTHFQFNELLLSSVAEAVYSSWYGTFQKNSENERRHFLSKIS-----SVSVWNVIRAT------TDQFLNPLFA--------GGEVHASSGSTMEAMLPVCRVRVMQLWVGQYQKAIGHMRLQQREFEMLQLIRQQEADLTRLYAALTSNQQLELRA 950
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A1V9XN12_9ACAR (Phosphatidylinositol-3-phosphatase (Fragment) n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XN12_9ACAR) HSP 1 Score: 205 bits (522), Expect = 4.790e-55 Identity = 125/305 (40.98%), Postives = 171/305 (56.07%), Query Frame = 3
Query: 567 MAGKGYEDVNEIGRDVATLGFMGIENIHYVRDSLASFCSAAQ--TPGQDFYHA-VGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLR---VHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLK 1463
MAGKG+E +E+ + A F GIENIH +R SL AA+ TP + A V +SGWL+H+ ++++A FV ++ G++V+VHCSDGWDRTAQ LA L LDP+YRT +GF+VL+EK+W SFGH F R + D P E +P+F Q+++ VWQ+ +Q+PSSFEF +L L + VYSA F F GNCE +RR S++ YL N + NPLYRP L GG L P Q + WR +Y R L VH RE+ + LR +++
Sbjct: 1 MAGKGFE--SEVFYEKAKFQFFGIENIHVMRASLQKLLEAAEMRTPNHGAFLAMVESSGWLKHIRAVLETAYFVARQIDYGISVVVHCSDGWDRTAQTCALASLLLDPFYRTFKGFQVLIEKDWLSFGHKFMDRCGFIQGD-PKEVAPIFTQFVEGVWQLTQQFPSSFEFNERFLITLHDHVYSAQFGTFIGNCECDRRNLKLTRT-----TYSLWGYLANN------SHAYRNPLYRPD---LDGGG-----------FLDPSLNPQAIRYWRGMYNRFELGVHPREQTGDLLAALRYHSTSMR 277
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A225WW75_9STRA (Myotubularin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WW75_9STRA) HSP 1 Score: 219 bits (558), Expect = 5.040e-55 Identity = 125/321 (38.94%), Postives = 183/321 (57.01%), Query Frame = 3
Query: 555 KRPKMAGKGYEDVNEIGRD---VATLGFMGIENIHYVRDSLASFCSAA-QTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLKAAYAVAGRRQTASL 1505
K +AGKG+E V + RD A + FMGI+NIH VR+SLA A + +F+ AV S WL H+ I++ A+ V L+RG AVLVHCSDGWDRTAQL+ LAQ+ LDPYYRTLEGF +L+EK+WCS+GH F R + ++SP+FLQ++DAV+Q+ Q+P+ F+F L + E VYS+ + F N E ERRE L + +VS++ +R T +NPL+ GG S ++ + P C ++ ++ W + Y + + ++++ + Q +R Q A+L YA Q L
Sbjct: 666 KSNALAGKGHESVKQYDRDGVPTAAITFMGIDNIHVVRNSLAGLAQALYEVEDSNFFGAVQKSRWLEHICSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQIMLDPYYRTLEGFALLIEKDWCSYGHNFQRRCSHPTSDQTSPIFLQFIDAVYQLTLQFPTHFQFNELLLSSVAEAVYSSWYGTFQKNSECERREFLSTVA-----SVSVWDVIRAT------TDQFLNPLFS-------GGEQTRAGSGLNMEPMLPVCRVRVMQLWVSQYQKAIGHMRLQQREFEMLQLIRQQEADLSRLYAALTSEQQLEL 968
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: A0A662X2G1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2G1_9STRA) HSP 1 Score: 218 bits (556), Expect = 9.380e-55 Identity = 132/318 (41.51%), Postives = 181/318 (56.92%), Query Frame = 3
Query: 546 VCVKRPKMAGKGYEDVNEIGRD---VATLGFMGIENIHYVRDSLASFCSAA-QTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGD--GGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGL--RLQVANLKAAYA 1475
+ K +AGKG+E V + RD A + FMGI+NIH VR+SLA A + +F+ AV S WL H+ I++ A+ V L+RG AVLVHCSDGWDRTAQL LAQ+ LDPYYRTLEGF +L+EKEWCSFGHMF R + ++SP+FLQ++DAV+Q+ Q+P+ F+F L + E VYS+ + F N E ER E L + +VS++ +R T +NPL+ GG G G A ++ + P C ++ ++ W + Y + I H R +Q E L R Q A L YA
Sbjct: 693 ISAKSNALAGKGHESVKQYDRDGVPTAAITFMGIDNIHVVRNSLAGLAQALYEVEDSNFFGAVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLAALAQIMLDPYYRTLEGFAILIEKEWCSFGHMFQKRCGHPTSDQTSPIFLQFIDAVYQLTLQFPTHFQFNELLLASVAEAVYSSWYGTFQKNSECERVEFLSTVT-----SVSVWDVIRAT------TDQFLNPLFA-------GGEGQEMGAAGAVYMEPMLPVCRVRVMQLWCSQYQKA--IGHMRLQQREFEMLLLIRQQEAELSRLYA 990
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Match: H3GIQ1_PHYRM (Protein-tyrosine-phosphatase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIQ1_PHYRM) HSP 1 Score: 218 bits (555), Expect = 1.180e-54 Identity = 127/323 (39.32%), Postives = 182/323 (56.35%), Query Frame = 3
Query: 555 KRPKMAGKGYEDVNEIGRD---VATLGFMGIENIHYVRDSLASFCSAA-QTPGQDFYHAVGASGWLRHLSQIIKSAAFVVDELQRGVAVLVHCSDGWDRTAQLTGLAQLCLDPYYRTLEGFEVLVEKEWCSFGHMFGLRVHSDSPTESSPVFLQWLDAVWQVMRQYPSSFEFTGHYLERLVEGVYSAAFLNFAGNCERERRERLRDLKGAGGGAVSIFSYLRENITEGHITAPMVNPLYRPPGRGLGGGNGDGGRSARTVDVLRPCCELQGLEPWRAVYMRDCLIVHHREKQLSVEQGLRLQVANLKAAYAVAGRRQTASLAA 1511
K +AGKG+E V + RD A + FMGI+NIH VR+SL A + +F+ AV S WL H+ I++ A+ V L+RG AVLVHCSDGWDRTAQL+ LAQ+ LDPYYRTLEGF LVEKEWCSFGHMF R + ++SP+FLQ++DAV+Q+ Q+P F+F L + E VYS+ + F N E ERR L + +VS++ +R T +NPL+ GG ++ ++ + P C ++ ++ W + Y + + ++++ + Q +R Q A+L YA Q L A
Sbjct: 664 KSNALAGKGHESVKQYDRDGVPTAAITFMGIDNIHVVRNSLVGLAQALYEVEDSNFFGAVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQIMLDPYYRTLEGFAQLVEKEWCSFGHMFQKRCSHPTSDQTSPIFLQFIDAVYQLTLQFPMHFQFNELLLASVAEAVYSSWYGTFQKNSECERRLFLSSVA-----SVSVWDVIRAT------TDQFLNPLFA-------GGEVQSSNTSGYMEPMLPVCRVRVMQLWVSQYQKAIGHMRLQQREFEMLQLIRQQEADLSRLYAALNSDQQLELRA 968 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig976.23857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig976.23857.1 >prot_P-canaliculata_contig976.23857.1 ID=prot_P-canaliculata_contig976.23857.1|Name=mRNA_P-canaliculata_contig976.23857.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=384bp MAGKGYEDVNEIGRDVATLGFMGIENIHYVRDSLASFCSAAQTPGQDFYHback to top mRNA from alignment at P-canaliculata_contig976:3027..9158+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig976.23857.1 ID=mRNA_P-canaliculata_contig976.23857.1|Name=mRNA_P-canaliculata_contig976.23857.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=6132bp|location=Sequence derived from alignment at P-canaliculata_contig976:3027..9158+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig976:3027..9158+ >mRNA_P-canaliculata_contig976.23857.1 ID=mRNA_P-canaliculata_contig976.23857.1|Name=mRNA_P-canaliculata_contig976.23857.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2304bp|location=Sequence derived from alignment at P-canaliculata_contig976:3027..9158+ (Pelvetia canaliculata dioecious)back to top |