mRNA_P-canaliculata_contig97419.23827.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig97419.23827.1
Unique NamemRNA_P-canaliculata_contig97419.23827.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A2G5IC14_CERBT (HTH CENPB-type domain-containing protein n=5 Tax=Cercospora TaxID=29002 RepID=A0A2G5IC14_CERBT)

HSP 1 Score: 253 bits (646), Expect = 4.790e-77
Identity = 165/290 (56.90%), Postives = 194/290 (66.90%), Query Frame = 1
Query:    1 WPSLLQQQPPSVSTAFPPPYVSQL-PYAPASAPPAPGPGSGHQLHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPD----AVSPSQTPYDVSPISPPDVVSP---ELQRPGARGRDSPAAADRPRSVPFH-----HSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            WPS+L +Q P+   ++PP Y   + P  P SA P         L TPVSATS RS S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+  DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D MIR +ARAFAATTT PD+H   TLS  W+ KFKLKNNL+GARS K   AP+D D      S S TP D SPISP  + SP   +LQR  ++      + D       H     HS STTSL SAFTD   S FS P PLSP
Sbjct:   76 WPSMLNRQGPA---SYPPIYQQPVQPLQPMSAGP---------LLTPVSATSTRSTSTPRKTLTDLDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPVKRAKGRSPDIERALAVWAKNQEKKGNPLSDDMIRAQARAFAATTTSPDNHV--TLSSSWIEKFKLKNNLMGARSRKASLAPDDADFGAAVSSSSHTPGDTSPISPSGLGSPSPIDLQRVQSQESLKNESPDDYIDFGNHRHGVFHSQSTTSLNSAFTDTAPSSFS-PGPLSP 350          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A150UUS1_9PEZI (HTH CENPB-type domain-containing protein n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150UUS1_9PEZI)

HSP 1 Score: 248 bits (632), Expect = 4.170e-76
Identity = 145/246 (58.94%), Postives = 174/246 (70.73%), Query Frame = 1
Query:  127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPD----AVSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDS------PAAADRPRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            + TP+SA S+RS S PR+TLTD DRRRMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+  D+G +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IR+KARAFAATTT PD+H    LS  W+ KFKLKNNL+GARS KG  AP+D +    A S S TP  VSP+SPP   SP  +    A+ ++S       +  D  R     HS S TSL SAFTD   S   SP PLSP
Sbjct:    4 VQTPISAVSSRSGSTPRKTLTDQDRRRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLAHDEGSKSPVKRAKGRSPDIERALAVWAKNQEKKGMPLTDEIIRDKARAFAATTTSPDNHT--VLSSSWIEKFKLKNNLMGARSRKGSLAPDDAEGISAATSSSHTPNGVSPVSPPAPGSPSPIDLHSAKSQESLKNESPDSFLDYTRRTGPFHSQSATSLNSAFTDTAPSSSFSPGPLSP 247          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: UPI001D851F81 (uncharacterized protein n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001D851F81)

HSP 1 Score: 241 bits (616), Expect = 9.630e-73
Identity = 147/246 (59.76%), Postives = 178/246 (72.36%), Query Frame = 1
Query:  127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDA---VSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDS--PAAADR-----PRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            LHTPVSATS RS S PR+TLTD DR+RMC+YAEE+P++KQTEIGA+FGVERSTVSKVLR +++Y+  DDG +SP+KR KGRSPDIERALA WA+ +ER+G PL D +IR+KARAF+ATTT  ++H   TLS  W+ KFKLKNNL+GARS K   A ++  A    S S TP D SP+SP  + SP  LQ   A+ +DS    ++D       R  PFH S STTSL SAFTD   S FS P PLSP
Sbjct:  106 LHTPVSATSTRSTSTPRKTLTDMDRKRMCQYAEEHPNAKQTEIGAIFGVERSTVSKVLRQKERYLFQDDGSRSPIKRTKGRSPDIERALAVWAKNQERRGLPLTDELIRDKARAFSATTTTTENHV--TLSSSWIEKFKLKNNLMGARSRKASLAADEDSASAAASSSHTPGDASPVSPSGIRSPSPLQLHHAQSQDSLQNESSDSYLEFGSRHGPFH-SQSTTSLNSAFTDTAPSSFS-PGPLSP 347          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: M2M0P6_BAUPA (HTH CENPB-type domain-containing protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2M0P6_BAUPA)

HSP 1 Score: 241 bits (616), Expect = 1.110e-72
Identity = 146/248 (58.87%), Postives = 175/248 (70.56%), Query Frame = 1
Query:  127 LHTPVSATSARSSG-PRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAVSP----SQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRP--------RSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            L TPVSA S++SS  PR+TLTD DR+RMC+YAE+NP+SKQTEIGA+FGVERSTVSKVLR ++KY+  DDG +SPVKR KGRSPDIERALA WA+ +ERKG PL D +IREKARAFA+T++ P+ H+   +S  W+ KFKLKNNL+GARS KG  AP+D D +S     S TP   SP+SP  V SP  +     R ++S    D P        R  PFH S S TSL SAFTD   S FS P PLSP
Sbjct:  104 LQTPVSAVSSKSSSTPRKTLTDLDRKRMCQYAEDNPNSKQTEIGAIFGVERSTVSKVLRQKEKYLCQDDGSRSPVKRAKGRSPDIERALAVWAKNQERKGMPLTDEVIREKARAFASTSSTPESHH--VVSSSWIEKFKLKNNLMGARSRKGSLAPDDADVLSATASSSHTPCGTSPVSPQGVGSPSPVDLHSTRSQES-LRNDSPGGYLDFSGRHGPFH-SQSATSLNSAFTDTAPSSFS-PGPLSP 346          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: N1Q0V1_DOTSN (HTH CENPB-type domain-containing protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=N1Q0V1_DOTSN)

HSP 1 Score: 240 bits (613), Expect = 2.560e-72
Identity = 145/245 (59.18%), Postives = 171/245 (69.80%), Query Frame = 1
Query:  127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDA---VSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRPRSVPF------HHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            LHTPVSATS RS S PR+TLTD DR+RMC+YAEE+P++KQTEIGA+FGVERSTVSKVLR ++KY+  DDG +SP+KR KGRSPDIERALA WA+ +ER+G PL D +IR+KARAF+ATTT PDH    TLS  W+ KFKLKNNL+GARS K   A ++  A    S S TP D SP+SP  V S   L+   A  +DS         + F       HS ST SL SAFTD   S FS P PLSP
Sbjct:  106 LHTPVSATSTRSTSTPRKTLTDMDRKRMCQYAEEHPNAKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPIKRTKGRSPDIERALAVWAKNQERRGLPLTDDLIRDKARAFSATTTTPDHQV--TLSASWIEKFKLKNNLMGARSRKASLAADEDSASAVASSSHTPGDASPVSPSGVGSASPLELHHAPSQDSLKNGSPDSYLEFGSRRGPFHSQSTNSLNSAFTDTAPSSFS-PGPLSP 347          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: N1QL74_SPHMS (HTH CENPB-type domain-containing protein n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QL74_SPHMS)

HSP 1 Score: 240 bits (612), Expect = 4.810e-72
Identity = 143/247 (57.89%), Postives = 172/247 (69.64%), Query Frame = 1
Query:  127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPD----AVSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRPRSVPF-------HHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            L TP+SATS +S S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++K++  DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IR +ARAFAATT+ PDH  +  LS  W+GKFKLKNNLLGARS K    P+DPD    A S S TP D+SP SP    SP  +    A+  +S           F       HH+ STTSL SA+T+   S FS P PLSP
Sbjct:  110 LMTPLSATSTKSTSTPRKTLTDLDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKFLFQDDGSRSPVKRAKGRSPDIERALAVWAKNQEKKGNPLSDDLIRAQARAFAATTSSPDHLVS--LSSSWIGKFKLKNNLLGARSRKTSLVPDDPDHPAAASSSSHTPGDLSPTSPSXXXSPSPIDLQSAQSYESQKRGSPDDYFDFASNRNGPHHAQSTTSLHSAYTENGPSSFS-PGPLSP 353          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A6A6BWR4_9PEZI (HTH CENPB-type domain-containing protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6BWR4_9PEZI)

HSP 1 Score: 239 bits (611), Expect = 6.610e-72
Identity = 145/247 (58.70%), Postives = 174/247 (70.45%), Query Frame = 1
Query:  127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDA---VSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRPRSV--------PFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            L TPVSATS+RS S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+  DDG +SP+KR KGRSPDIERALA WA+ +E+KG PL D +IREKARAF+ATTT PD+H    LS  W+ KFKLKNNL+GARS K   A ++  A    S S TP D SP+SP  + SP  L+    +  +S    + P S         PFH S ST SL SAFTD   S FS P P+SP
Sbjct:  107 LQTPVSATSSRSTSTPRKTLTDMDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPIKRAKGRSPDIERALAVWAKNQEKKGNPLSDDLIREKARAFSATTTSPDNHV--ALSSSWIEKFKLKNNLMGARSRKASLAADEDGASAAASSSHTPGDTSPVSPSGIGSPSPLELHSTQSHES-LKNESPDSYLDFGSRHGPFH-SQSTNSLNSAFTDTAPSSFS-PGPISP 348          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A6H0XMV5_9PEZI (HTH CENPB-type domain-containing protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XMV5_9PEZI)

HSP 1 Score: 238 bits (607), Expect = 2.200e-71
Identity = 142/245 (57.96%), Postives = 170/245 (69.39%), Query Frame = 1
Query:  127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAV------SPSQTPYDVSPISPPDVVSPELQRPGA----RGRDSPAAADRPRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            + TPVSA+S+RS S PR+TLTD+DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+  DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IREKARAFAATT  P++H    +S  W+ KFKLKNNL+GARS K   AP+D D V      S +      SP+  P     ELQ   +    R        D P  +PFH S STTSL SAFTD   S FS P PLSP
Sbjct:  105 IPTPVSASSSRSLSTPRKTLTDHDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLLQDDGSRSPVKRAKGRSPDIERALAIWAKNQEKKGLPLSDDLIREKARAFAATTATPENHV--AMSASWIEKFKLKNNLMGARSRKSSLAPDDTDNVAGIFGASSAAGTSPSSPVPAPSTSPVELQGAASHENLRNESPDGYIDFPGRLPFH-SQSTTSLNSAFTDTAPSSFS-PGPLSP 345          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A1Z5SU19_HORWE (HTH CENPB-type domain-containing protein n=11 Tax=Hortaea werneckii TaxID=91943 RepID=A0A1Z5SU19_HORWE)

HSP 1 Score: 236 bits (603), Expect = 1.250e-70
Identity = 145/248 (58.47%), Postives = 175/248 (70.56%), Query Frame = 1
Query:  121 HQLHTPVSATSARSSG-PRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTT---QPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAVSPSQTPYDVSPISPPDVVSPE--LQRPGARGRD-----SPAA-ADRPRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            +QLHTPVSA SARS+  PR+TLTD+DR+RMC+YAE++P++KQTEIGA+FGVERSTVSKVLR +DKY+  +DG +SPVKR KGRSPDIERALA WA+ +ERK  PL D +IR+KARAF+ATTT    PD+H+   LSP WL KFKLK+NL+GARS K   APED +++S   TP   S  S P  + P   L    +R +D     SP    D   S    HS S TSL SAFTD   S FS P PLSP
Sbjct:  103 NQLHTPVSAISARSAPIPRKTLTDSDRKRMCQYAEDHPNAKQTEIGAIFGVERSTVSKVLRQKDKYLIQEDGSKSPVKRAKGRSPDIERALAVWAKNQERKCLPLTDELIRDKARAFSATTTTTKSPDNHH--ALSPIWLEKFKLKHNLMGARSRKSSLAPEDAESISTCHTPGGASSPSSPRALGPTSPLDLDTSRSQDAFKHESPDNYLDYTTSRGPFHSQSATSLNSAFTDTAPSSFS-PGPLSP 347          
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: N1QAT8_PSEFD (HTH CENPB-type domain-containing protein (Fragment) n=4 Tax=Pseudocercospora TaxID=131324 RepID=N1QAT8_PSEFD)

HSP 1 Score: 235 bits (600), Expect = 1.350e-70
Identity = 159/289 (55.02%), Postives = 186/289 (64.36%), Query Frame = 1
Query:    1 WPSLLQQQPPSVSTAFPPPYVSQLPYAPASAPPAPGPGSGHQLHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAV----SPSQTPYDVSPISPPDVVSPE------LQRPGARGRDSPAAADRPRSV--PFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828
            WPSLL  QP S      P  V   P  P S  P         L TPVSA  +RS S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+  DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IR++ARAFAATTT  ++H    LS  W+ KFKLKNNL+GARS K   AP+D D      S S TP D SPISP  + SP       +Q   +   +SP +     S   PFH S ST SL SAFTD   S FS P PLSP
Sbjct:   47 WPSLLNSQPHSTYQPMYPQPVQ--PIQPMSIGP---------LVTPVSAAPSRSTSTPRKTLTDLDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPVKRAKGRSPDIERALAVWAKNQEKKGNPLTDHLIRQQARAFAATTTMAENHV--ALSSSWIEKFKLKNNLMGARSRKASLAPDDLDGSAAQSSSSHTPGDTSPISPGALGSPSPIELHSVQSQESLKNESPDSYLEFGSTHGPFH-SQSTNSLNSAFTDTAPSSFS-PGPLSP 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G5IC14_CERBT4.790e-7756.90HTH CENPB-type domain-containing protein n=5 Tax=C... [more]
A0A150UUS1_9PEZI4.170e-7658.94HTH CENPB-type domain-containing protein n=1 Tax=A... [more]
UPI001D851F819.630e-7359.76uncharacterized protein n=1 Tax=Passalora fulva Ta... [more]
M2M0P6_BAUPA1.110e-7258.87HTH CENPB-type domain-containing protein n=1 Tax=B... [more]
N1Q0V1_DOTSN2.560e-7259.18HTH CENPB-type domain-containing protein n=1 Tax=D... [more]
N1QL74_SPHMS4.810e-7257.89HTH CENPB-type domain-containing protein n=1 Tax=S... [more]
A0A6A6BWR4_9PEZI6.610e-7258.70HTH CENPB-type domain-containing protein n=1 Tax=Z... [more]
A0A6H0XMV5_9PEZI2.200e-7157.96HTH CENPB-type domain-containing protein n=1 Tax=P... [more]
A0A1Z5SU19_HORWE1.250e-7058.47HTH CENPB-type domain-containing protein n=11 Tax=... [more]
N1QAT8_PSEFD1.350e-7055.02HTH CENPB-type domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97419contigP-canaliculata_contig97419:10..1081 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score246.1
Seed ortholog evalue2e-62
Seed eggNOG ortholog430998.XP_007671762.1
EggNOG free text desc.Putative DNA-binding domain in centromere protein B, mouse jerky and transposases.
EggNOG OGs20A6F@147541,2CZE4@1,2S9XT@2759,3A625@33154,3MHX7@451867,3Q53N@4751,3RNGH@4890
COG Functional cat.S
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size891
Cds size891
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97419.23827.1prot_P-canaliculata_contig97419.23827.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig97419 10..1081 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817337.6444144-CDS-P-canaliculata_contig97419:9..2651622817337.6444144-CDS-P-canaliculata_contig97419:9..265Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 10..265 +
1693495232.0583644-CDS-P-canaliculata_contig97419:9..2651693495232.0583644-CDS-P-canaliculata_contig97419:9..265Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 10..265 +
1622817337.6577973-CDS-P-canaliculata_contig97419:325..3471622817337.6577973-CDS-P-canaliculata_contig97419:325..347Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 326..347 +
1693495232.0710006-CDS-P-canaliculata_contig97419:325..3471693495232.0710006-CDS-P-canaliculata_contig97419:325..347Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 326..347 +
1622817337.672698-CDS-P-canaliculata_contig97419:408..5411622817337.672698-CDS-P-canaliculata_contig97419:408..541Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 409..541 +
1693495232.0804014-CDS-P-canaliculata_contig97419:408..5411693495232.0804014-CDS-P-canaliculata_contig97419:408..541Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 409..541 +
1622817337.6860373-CDS-P-canaliculata_contig97419:601..10811622817337.6860373-CDS-P-canaliculata_contig97419:601..1081Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 602..1081 +
1693495232.0917583-CDS-P-canaliculata_contig97419:601..10811693495232.0917583-CDS-P-canaliculata_contig97419:601..1081Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97419 602..1081 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig97419.23827.1

>prot_P-canaliculata_contig97419.23827.1 ID=prot_P-canaliculata_contig97419.23827.1|Name=mRNA_P-canaliculata_contig97419.23827.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=297bp
WPSLLQQQPPSVSTAFPPPYVSQLPYAPASAPPAPGPGSGHQLHTPVSAT
SARSSGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLR
HRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIR
EKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDP
DAVSPSQTPYDVSPISPPDVVSPELQRPGARGRDSPAAADRPRSVPFHHS
HSTTSLRSAFTDPNRSPFSSPRPLSPPPPFFPPPAPPPPPPPPPPPP
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mRNA from alignment at P-canaliculata_contig97419:10..1081+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig97419.23827.1 ID=mRNA_P-canaliculata_contig97419.23827.1|Name=mRNA_P-canaliculata_contig97419.23827.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1072bp|location=Sequence derived from alignment at P-canaliculata_contig97419:10..1081+ (Pelvetia canaliculata dioecious)
TGGCCATCCCTGCTTCAACAGCAACCTCCATCCGTCTCCACCGCCTTCCC CCCACCCTACGTCTCCCAATTGCCCTACGCCCCCGCCTCCGCTCCTCCCG CTCCCGGCCCCGGCTCCGGACATCAACTCCACACCCCCGTCTCCGCCACC TCGGCGCGTTCCTCCGGCCCTCGTCGCACCTTAACCGACAACGACCGTCG CCGCATGTGTCGCTATGCCGAGGAGAACCCCCATAGCAAGCAGACCGAGA TTGGCGGTGCGTTTGCTCCCCTGCCCTGATTCCATGGTGCAGACTGCTCG TACTGACCACGCGCAGCCGTGTTCGGAGTGGAACGCAGGTGAGCGGCCGA CGCGAGACGGCAACGTCGACGCGTCCCGACACTGACGACGTTCCTGCAGC ACGGTCTCCAAGGTCTTGCGACATCGAGACAAGTATATGACGCCCGACGA CGGCGGTCAGTCTCCCGTCAAACGCGGCAAAGGCCGCTCGCCCGATATTG AGCGTGCCTTGGCCAATTGGGCTCGCAAGGAGGTTGGTTTTGTCTGTTAC CACGCCCCACCCTCCGATCAATGCGCCTGACCAACTACACAGGAACGCAA AGGCGCCCCCCTCGACGACGGCATGATTCGCGAAAAAGCCCGAGCTTTCG CCGCCACCACCACACAACCCGACCATCATTACAATTACACCCTCAGCCCC CACTGGCTGGGCAAATTCAAGCTGAAGAACAACCTGCTCGGCGCCCGATC CGGCAAGGGTCCGCACGCGCCTGAAGACCCCGACGCCGTCTCGCCCTCAC AGACCCCCTACGATGTCTCGCCCATCTCTCCCCCCGACGTCGTCTCCCCG GAGCTCCAACGCCCCGGCGCACGAGGTCGTGATAGTCCTGCCGCCGCCGA CCGCCCCCGATCCGTCCCTTTTCATCACTCCCACAGCACCACCTCCCTGC GCAGCGCTTTTACCGACCCCAACCGCTCGCCCTTCTCCTCCCCCCGCCCC CTGAGCCCCCCCCCCCCCTTCTTCCCCCCCCCCGCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCC
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Coding sequence (CDS) from alignment at P-canaliculata_contig97419:10..1081+

>mRNA_P-canaliculata_contig97419.23827.1 ID=mRNA_P-canaliculata_contig97419.23827.1|Name=mRNA_P-canaliculata_contig97419.23827.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at P-canaliculata_contig97419:10..1081+ (Pelvetia canaliculata dioecious)
TGGCCATCCCTGCTTCAACAGCAACCTCCATCCGTCTCCACCGCCTTCCC
CCCACCCTACGTCTCCCAATTGCCCTACGCCCCCGCCTCCGCTCCTCCCG
CTCCCGGCCCCGGCTCCGGACATCAACTCCACACCCCCGTCTCCGCCACC
TCGGCGCGTTCCTCCGGCCCTCGTCGCACCTTAACCGACAACGACCGTCG
CCGCATGTGTCGCTATGCCGAGGAGAACCCCCATAGCAAGCAGACCGAGA
TTGGCGTGGCCATCCCTGCTTCAACAGCAACCTCCATCCGTCTCCACCGC
CTTCCCCCCACCCTACGTCTCCCAATTGCCCTACGCCCCCGCCTCCGCTC
CTCCCGCTCCCGGCCCCGGCTCCGGACATCAACTCCACACCCCCGTCTCC
GCCACCTCGGCGCGTTCCTCCGGCCCTCGTCGCACCTTAACCGACAACGA
CCGTCGCCGCATGTGTCGCTATGCCGAGGAGAACCCCCATAGCAAGCAGA
CCGAGATTGGCGCCGTGTTCGGAGTGGAACGCAGCCGTGTTCGGAGTGGA
ACGCAGCACGGTCTCCAAGGTCTTGCGACATCGAGACAAGTATATGACGC
CCGACGACGGCGGTCAGTCTCCCGTCAAACGCGGCAAAGGCCGCTCGCCC
GATATTGAGCGTGCCTTGGCCAATTGGGCTCGCAAGGAGCACGGTCTCCA
AGGTCTTGCGACATCGAGACAAGTATATGACGCCCGACGACGGCGGTCAG
TCTCCCGTCAAACGCGGCAAAGGCCGCTCGCCCGATATTGAGCGTGCCTT
GGCCAATTGGGCTCGCAAGGAGGAACGCAAAGGCGCCCCCCTCGACGACG
GCATGATTCGCGAAAAAGCCCGAGCTTTCGCCGCCACCACCACACAACCC
GACCATCATTACAATTACACCCTCAGCCCCCACTGGCTGGGCAAATTCAA
GCTGAAGAACAACCTGCTCGGCGCCCGATCCGGCAAGGGTCCGCACGCGC
CTGAAGACCCCGACGCCGTCTCGCCCTCACAGACCCCCTACGATGTCTCG
CCCATCTCTCCCCCCGACGTCGTCTCCCCGGAGCTCCAACGCCCCGGCGC
ACGAGGTCGTGATAGTCCTGCCGCCGCCGACCGCCCCCGATCCGTCCCTT
TTCATCACTCCCACAGCACCACCTCCCTGCGCAGCGCTTTTACCGACCCC
AACCGCTCGCCCTTCTCCTCCCCCCGCCCCCTGAGCCCCCCCCCCCCCTT
CTTCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCGAACGCAAAGGCGCCCCCCTCGACGACGGCATGATTCGCGAAAAAGCC
CGAGCTTTCGCCGCCACCACCACACAACCCGACCATCATTACAATTACAC
CCTCAGCCCCCACTGGCTGGGCAAATTCAAGCTGAAGAACAACCTGCTCG
GCGCCCGATCCGGCAAGGGTCCGCACGCGCCTGAAGACCCCGACGCCGTC
TCGCCCTCACAGACCCCCTACGATGTCTCGCCCATCTCTCCCCCCGACGT
CGTCTCCCCGGAGCTCCAACGCCCCGGCGCACGAGGTCGTGATAGTCCTG
CCGCCGCCGACCGCCCCCGATCCGTCCCTTTTCATCACTCCCACAGCACC
ACCTCCCTGCGCAGCGCTTTTACCGACCCCAACCGCTCGCCCTTCTCCTC
CCCCCGCCCCCTGAGCCCCCCCCCCCCCTTCTTCCCCCCCCCCGCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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