Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 328 |
| Cds size | 327 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817337.3751228-CDS-P-canaliculata_contig974:25698..25872 | 1622817337.3751228-CDS-P-canaliculata_contig974:25698..25872 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig974 25699..25872 - |
| 1693495231.872386-CDS-P-canaliculata_contig974:25698..25872 | 1693495231.872386-CDS-P-canaliculata_contig974:25698..25872 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig974 25699..25872 - |
| 1622817337.3876143-CDS-P-canaliculata_contig974:26250..26403 | 1622817337.3876143-CDS-P-canaliculata_contig974:26250..26403 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig974 26251..26403 - |
| 1693495231.8850174-CDS-P-canaliculata_contig974:26250..26403 | 1693495231.8850174-CDS-P-canaliculata_contig974:26250..26403 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig974 26251..26403 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig974.23826.1 >prot_P-canaliculata_contig974.23826.1 ID=prot_P-canaliculata_contig974.23826.1|Name=mRNA_P-canaliculata_contig974.23826.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=109bp
VLFAKRQPCDLRVRLRGSSLRTRVVARWLQENVLHPRTRKHKIKMKLNSP
GMKLVRETESDRRPFAGFRNRASFWKSVSTHASSLTRPCPRYGYRGGHGG
GGGRGGGG* back to topmRNA from alignment at P-canaliculata_contig974:25699..26403- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig974.23826.1 ID=mRNA_P-canaliculata_contig974.23826.1|Name=mRNA_P-canaliculata_contig974.23826.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=705bp|location=Sequence derived from alignment at P-canaliculata_contig974:25699..26403- (Pelvetia canaliculata dioecious)
GTGCTCTTCGCCAAAAGACAACCTTGTGATCTCCGAGTGAGGTTGCGGGG
TTCCTCGCTTCGGACGAGAGTGGTTGCAAGATGGCTTCAAGAGAACGTCC
TCCATCCTCGAACAAGGAAACACAAAATCAAAATGAAACTCAACAGTCCC
GGGGTAAGATGTAACGGCCGGCGCGCGTGTACAGGGCGGCTTGAATCTCG
TGCGGAGCCAGAACTGCTTTCGAAGGCTCGGCCTCGCGTGTACGAAACAG
GACACTCTGTGCTTGCGCTTGCTGGAGACTATTAATAGGAGACTTCCCCC
ATATCCCTGTTGGAAACAAAGAAACGTACTGGTAGGAATAAGGAAACGAA
TATTTAGAGTGGATGGATGCTTTTCCACCGAGGCAAATGTTTTGTCGACA
TGAGAAGCAGGGCCGATCCGCTTTTGTACTCTCATTATCTCCTTTCCTTT
TTCAAAAGGAGCGCGAGTATAACATCAACCGCCCGTGAATATTGGTCAAG
TATCGGAGGCCCTCCCACCTATGACCCGCAGATGAAGCTCGTTCGAGAGA
CGGAGAGCGATCGACGGCCGTTCGCCGGGTTTCGGAATCGAGCAAGCTTC
TGGAAGAGTGTATCAACGCACGCGAGCAGCTTGACTCGGCCATGTCCAAG
ATACGGTTATCGCGGCGGTCATGGAGGGGGGGGGGGGAGGGGAGGGGGAG
GCTAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig974:25699..26403- >mRNA_P-canaliculata_contig974.23826.1 ID=mRNA_P-canaliculata_contig974.23826.1|Name=mRNA_P-canaliculata_contig974.23826.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=654bp|location=Sequence derived from alignment at P-canaliculata_contig974:25699..26403- (Pelvetia canaliculata dioecious)
GTGCTCTTCGCCAAAAGACAACCTTGTGATCTCCGAGTGAGGTTGCGGGG
TTCCTCGCTTCGGACGAGAGTGGTTGCAAGATGGCTTCAAGAGAACGTCC
TCCATCCTCGAACAAGGAAACACAAAATCAAAATGAAACTCAACAGTCCC
GGGGTGCTCTTCGCCAAAAGACAACCTTGTGATCTCCGAGTGAGGTTGCG
GGGTTCCTCGCTTCGGACGAGAGTGGTTGCAAGATGGCTTCAAGAGAACG
TCCTCCATCCTCGAACAAGGAAACACAAAATCAAAATGAAACTCAACAGT
CCCGGGATGAAGCTCGTTCGAGAGACGGAGAGCGATCGACGGCCGTTCGC
CGGGTTTCGGAATCGAGCAAGCTTCTGGAAGAGTGTATCAACGCACGCGA
GCAGCTTGACTCGGCCATGTCCAAGATACGGTTATCGCGGCGGTCATGGA
GGGGGGGGGGGGAGGGGAGGGGGAGGCTAAATGAAGCTCGTTCGAGAGAC
GGAGAGCGATCGACGGCCGTTCGCCGGGTTTCGGAATCGAGCAAGCTTCT
GGAAGAGTGTATCAACGCACGCGAGCAGCTTGACTCGGCCATGTCCAAGA
TACGGTTATCGCGGCGGTCATGGAGGGGGGGGGGGGAGGGGAGGGGGAGG
CTAA back to top
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