mRNA_P-canaliculata_contig9735.23821.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: A0A6G1LHT3_9PEZI (RNA-binding domain-containing protein n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1LHT3_9PEZI) HSP 1 Score: 145 bits (367), Expect = 5.050e-41 Identity = 80/99 (80.81%), Postives = 83/99 (83.84%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGGGXXX----GRGGY 285 GLAWHTDD TLR KFEE+GQVDEAV VVKDR+TGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVD+ASERAPG G XX GRGGY Sbjct: 8 GLAWHTDDQTLRTKFEEYGQVDEAV--------VVKDRDTGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDKASERAPGSGGXXXXXGGRGGY 98
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: A0A4U0TXT9_9PEZI (RRM domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A4U0TXT9_9PEZI) HSP 1 Score: 139 bits (349), Expect = 5.420e-38 Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGGG 261 GLAWHTDD TLR KFEEFGQVDEA+ VVKDR+TGRSRGFGFVRF++D+A+++AIAAMNNVEFDGRTIRVD+ASERAPGGG Sbjct: 8 GLAWHTDDQTLRQKFEEFGQVDEAI--------VVKDRDTGRSRGFGFVRFSEDSASDAAIAAMNNVEFDGRTIRVDKASERAPGGG 86
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: M2N8A3_BAUPA (RRM domain-containing protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2N8A3_BAUPA) HSP 1 Score: 137 bits (346), Expect = 6.430e-38 Identity = 69/87 (79.31%), Postives = 76/87 (87.36%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGGG 261 GLAWHTDD TLR KFEEFGQV+EA+ V+KDR+TGRSRGFGFVRFA+DAAA+SAIAAMNNVEFDGRTIRVD+ASERA GGG Sbjct: 9 GLAWHTDDQTLRAKFEEFGQVEEAI--------VIKDRDTGRSRGFGFVRFAEDAAADSAIAAMNNVEFDGRTIRVDKASERAQGGG 87
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: UPI000CE18714 (glycine-rich RNA-binding, abscisic acid-inducible protein-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE18714) HSP 1 Score: 135 bits (341), Expect = 4.230e-37 Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGG 258 GLAWHTDD TLR KFEEFGQVDEA+ VVKDR+TGRSRGFGFVRF +D+A+++AIAAMNNVEFDGRTIRVD+ASERAPGG Sbjct: 8 GLAWHTDDQTLRAKFEEFGQVDEAI--------VVKDRDTGRSRGFGFVRFTEDSASDAAIAAMNNVEFDGRTIRVDKASERAPGG 85
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: A0A6A6PYZ6_9PEZI (RRM domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PYZ6_9PEZI) HSP 1 Score: 134 bits (336), Expect = 2.070e-36 Identity = 67/85 (78.82%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPG 255 GLAWHTDD TLR KFEEFGQVDEA+ VVKDR+TGRSRGFGFVRFA+D+AA+SAIAAMNNVEFDGRTIRVD+ASER G Sbjct: 8 GLAWHTDDQTLRQKFEEFGQVDEAI--------VVKDRDTGRSRGFGFVRFAEDSAADSAIAAMNNVEFDGRTIRVDKASERGAG 84
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: M2YN31_PSEFD (RRM domain-containing protein n=2 Tax=Pseudocercospora TaxID=131324 RepID=M2YN31_PSEFD) HSP 1 Score: 133 bits (335), Expect = 4.150e-36 Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPG 255 GLAWHTDD TLR KFEEFGQVDEAV VVKDR+TGRSRGFGFVRFA+DAAA+SAIAAMNNVEFDGRTIRVD+AS+R G Sbjct: 8 GLAWHTDDQTLRTKFEEFGQVDEAV--------VVKDRDTGRSRGFGFVRFAEDAAADSAIAAMNNVEFDGRTIRVDKASDRGSG 84
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: A0A6A6P7C7_9PEZI (RRM domain-containing protein n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P7C7_9PEZI) HSP 1 Score: 132 bits (332), Expect = 5.510e-36 Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGGGXXXGRGGYN 288 GLAWHTDD TLR KFEEFG V+EAV VVKDR+TGRSRGFGFVRF+ ++ A++AIA+MNNVEFDGR IRVD+AS+++ GGG GRGGYN Sbjct: 8 GLAWHTDDATLRAKFEEFGHVEEAV--------VVKDRDTGRSRGFGFVRFSQESEADAAIASMNNVEFDGRLIRVDKASDKSGGGGGFQGRGGYN 95
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: F9XC08_ZYMTI (RRM domain-containing protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9XC08_ZYMTI) HSP 1 Score: 132 bits (332), Expect = 1.280e-35 Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGG 258 GLAWHTDD TLR KFEE+GQVDEA+ VVKDR+TGRSRGFGFVRFADDA A++AI AMNNVEFDGRTIRVD+ASER GG Sbjct: 8 GLAWHTDDQTLRAKFEEYGQVDEAI--------VVKDRDTGRSRGFGFVRFADDAGADAAITAMNNVEFDGRTIRVDKASERGAGG 85
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: A0A3M7BRA4_HORWE (RRM domain-containing protein (Fragment) n=1 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7BRA4_HORWE) HSP 1 Score: 130 bits (327), Expect = 1.530e-35 Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPGGGXXXG 273 GLAWHTDD TLR KFEEFGQVDEA+ VVKDR+TGRSRGFGFVRFA+D+AAE+AIA MNNVEFDGR IRVD+ASER GG G Sbjct: 8 GLAWHTDDQTLRLKFEEFGQVDEAI--------VVKDRDTGRSRGFGFVRFAEDSAAENAIAQMNNVEFDGRQIRVDKASERPAGGSGGFG 90
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Match: A0A6A6CAZ6_9PEZI (RRM domain-containing protein (Fragment) n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CAZ6_9PEZI) HSP 1 Score: 129 bits (325), Expect = 1.580e-35 Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 1 GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRFADDAAAESAIAAMNNVEFDGRTIRVDRASERAPG 255 GLAWHTDD TLR KFEEFG VDEA+ VVKDR+TGRSRGFGFVRF+++AAAESAI+AMNNVEFDGRTIRVD+ASER G Sbjct: 11 GLAWHTDDQTLRSKFEEFGAVDEAI--------VVKDRDTGRSRGFGFVRFSEEAAAESAISAMNNVEFDGRTIRVDKASERGSG 87 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9735.23821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9735.23821.1 >prot_P-canaliculata_contig9735.23821.1 ID=prot_P-canaliculata_contig9735.23821.1|Name=mRNA_P-canaliculata_contig9735.23821.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=195bp GLAWHTDDDTLRHKFEEFGQVDEAVSHPLLPMVVVKDRETGRSRGFGFVRback to top mRNA from alignment at P-canaliculata_contig9735:6170..6980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9735.23821.1 ID=mRNA_P-canaliculata_contig9735.23821.1|Name=mRNA_P-canaliculata_contig9735.23821.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=811bp|location=Sequence derived from alignment at P-canaliculata_contig9735:6170..6980- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9735:6170..6980- >mRNA_P-canaliculata_contig9735.23821.1 ID=mRNA_P-canaliculata_contig9735.23821.1|Name=mRNA_P-canaliculata_contig9735.23821.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at P-canaliculata_contig9735:6170..6980- (Pelvetia canaliculata dioecious)back to top |