|
|
Homology
BLAST of mRNA_P-canaliculata_contig973.23812.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 6.660e-9 Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 3 Query: 1194 TGDPPWRATWEEGFDNESALGGGLLMSLSAMEEYEGKSHEESRLEDYARNRKNNLAVGCGPLD-GATPKS 1400
TG+P WR T E ++ G+L S+SAM+EYEGKSHEE R+EDY NRKN+LAV G GA P S
Sbjct: 215 TGNPAWRETRAEDPTGKAGANPGMLQSISAMKEYEGKSHEELRVEDYLLNRKNSLAVTAGATAAGAAPSS 284
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 66.6 |
| Seed ortholog evalue | 4.7e-08 |
| Seed eggNOG ortholog | 2880.D7FX93 |
| Preferred name | NUP145 |
| KEGG ko | ko:K14297,ko:K18716,ko:K18720 |
| KEGG TC | 1.I.1 |
| KEGG Pathway | ko03013,ko05164,map03013,map05164 |
| KEGG Module | M00427 |
| GOs | GO:0000972,GO:0000973,GO:0003674,GO:0003676,GO:0003723,GO:0005048,GO:0005198,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006325,GO:0006342,GO:0006344,GO:0006348,GO:0006355,GO:0006403,GO:0006405,GO:0006406,GO:0006409,GO:0006606,GO:0006607,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006996,GO:0006997,GO:0008104,GO:0008139,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016043,GO:0016458,GO:0016973,GO:0017038,GO:0017056,GO:0019219,GO:0019222,GO:0031080,GO:0031081,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031503,GO:0031967,GO:0031975,GO:0032386,GO:0032879,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0033554,GO:0034397,GO:0034398,GO:0034504,GO:0034613,GO:0034629,GO:0034641,GO:0035392,GO:0036228,GO:0040029,GO:0042277,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044446,GO:0044464,GO:0044613,GO:0044614,GO:0045184,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046822,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050000,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051031,GO:0051049,GO:0051168,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051640,GO:0051641,GO:0051649,GO:0051664,GO:0051668,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071431,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072657,GO:0080090,GO:0090304,GO:0090435,GO:0097064,GO:0097159,GO:1901360,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | structural constituent of nuclear pore |
| EggNOG OGs | KOG0845@1,KOG0845@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03036 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Model size | 3071 |
| Cds size | 1902 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817336.5855472-UTR-P-canaliculata_contig973:6050..6229 | 1622817336.5855472-UTR-P-canaliculata_contig973:6050..6229 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig973 6051..6229 + |
| 1693495231.306644-UTR-P-canaliculata_contig973:6050..6229 | 1693495231.306644-UTR-P-canaliculata_contig973:6050..6229 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig973 6051..6229 + |
| 1622817336.710923-UTR-P-canaliculata_contig973:10778..11768 | 1622817336.710923-UTR-P-canaliculata_contig973:10778..11768 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig973 10779..11768 + |
| 1693495231.4311457-UTR-P-canaliculata_contig973:10778..11768 | 1693495231.4311457-UTR-P-canaliculata_contig973:10778..11768 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig973 10779..11768 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817336.5971978-CDS-P-canaliculata_contig973:6229..6784 | 1622817336.5971978-CDS-P-canaliculata_contig973:6229..6784 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 6230..6784 + |
| 1693495231.3226676-CDS-P-canaliculata_contig973:6229..6784 | 1693495231.3226676-CDS-P-canaliculata_contig973:6229..6784 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 6230..6784 + |
| 1622817336.61005-CDS-P-canaliculata_contig973:7140..7695 | 1622817336.61005-CDS-P-canaliculata_contig973:7140..7695 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 7141..7695 + |
| 1693495231.3401034-CDS-P-canaliculata_contig973:7140..7695 | 1693495231.3401034-CDS-P-canaliculata_contig973:7140..7695 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 7141..7695 + |
| 1622817336.6220958-CDS-P-canaliculata_contig973:7909..7985 | 1622817336.6220958-CDS-P-canaliculata_contig973:7909..7985 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 7910..7985 + |
| 1693495231.3511658-CDS-P-canaliculata_contig973:7909..7985 | 1693495231.3511658-CDS-P-canaliculata_contig973:7909..7985 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 7910..7985 + |
| 1622817336.633613-CDS-P-canaliculata_contig973:8186..8368 | 1622817336.633613-CDS-P-canaliculata_contig973:8186..8368 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 8187..8368 + |
| 1693495231.3615637-CDS-P-canaliculata_contig973:8186..8368 | 1693495231.3615637-CDS-P-canaliculata_contig973:8186..8368 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 8187..8368 + |
| 1622817336.6448386-CDS-P-canaliculata_contig973:8733..8809 | 1622817336.6448386-CDS-P-canaliculata_contig973:8733..8809 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 8734..8809 + |
| 1693495231.371963-CDS-P-canaliculata_contig973:8733..8809 | 1693495231.371963-CDS-P-canaliculata_contig973:8733..8809 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 8734..8809 + |
| 1622817336.6570826-CDS-P-canaliculata_contig973:8998..9126 | 1622817336.6570826-CDS-P-canaliculata_contig973:8998..9126 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 8999..9126 + |
| 1693495231.382322-CDS-P-canaliculata_contig973:8998..9126 | 1693495231.382322-CDS-P-canaliculata_contig973:8998..9126 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 8999..9126 + |
| 1622817336.6738627-CDS-P-canaliculata_contig973:9680..9768 | 1622817336.6738627-CDS-P-canaliculata_contig973:9680..9768 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 9681..9768 + |
| 1693495231.4019113-CDS-P-canaliculata_contig973:9680..9768 | 1693495231.4019113-CDS-P-canaliculata_contig973:9680..9768 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 9681..9768 + |
| 1622817336.6852431-CDS-P-canaliculata_contig973:9920..10099 | 1622817336.6852431-CDS-P-canaliculata_contig973:9920..10099 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 9921..10099 + |
| 1693495231.4115865-CDS-P-canaliculata_contig973:9920..10099 | 1693495231.4115865-CDS-P-canaliculata_contig973:9920..10099 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 9921..10099 + |
| 1622817336.6971576-CDS-P-canaliculata_contig973:10715..10778 | 1622817336.6971576-CDS-P-canaliculata_contig973:10715..10778 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 10716..10778 + |
| 1693495231.4218473-CDS-P-canaliculata_contig973:10715..10778 | 1693495231.4218473-CDS-P-canaliculata_contig973:10715..10778 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig973 10716..10778 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig973.23812.1 >prot_P-canaliculata_contig973.23812.1 ID=prot_P-canaliculata_contig973.23812.1|Name=mRNA_P-canaliculata_contig973.23812.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=634bp
MPAHRTIQVSESGESESTPPPQISASPPNSPAEAFFPALASAGPTGVAIS
AANPGSYFPPTAPSSVFGSGPVSNNPFATMTTAGAPPLSNDALNPSFGMF
SPPIPPTGGGPPAGWHSVAASFATRANDLARRTLARFQGPGYVGSGASSA
NQAFNSPVAHNSTPSPSRAGSELGGFVDMEASYEQRQNRIRGASAWGSLE
PPNDLNASFGTDRAAVVGSPSSFTAAASTWALAGPACCRCPQRASSTFGT
SDLSASALMGAGAATRAMKGAPGVSDFASSSNPVTTAGAAQGSYMPSTTI
SDRCTTCGGSLSSANVSSEGLNTVGFGGWGEEGSRGLSTGDPPWRATWEE
GFDNESALGGGLLMSLSAMEEYEGKSHEESRLEDYARNRKNNLAVGCGPL
DGATPKSLPVVVDGFVFAVPSKRRGTGNPAWQATPTRDQIGSSVSMSNIM
SISAMWDYRNESHEELRLQDYTENSRGCSAKDDTDRRGEPTRQGEKRNDP
EWQETDTGAFVFVYPFLMSISAMAAYQSKSHEELRLEDYLRSREEISTDA
PSQGSSDVPEALTTTTTPAAKSSLTSAVPPQQKGTGDPAWQPLLMDVKPA
VFAQVLMSISAMQAYATMSHEELRLEYYLQNRK* back to topmRNA from alignment at P-canaliculata_contig973:6051..11768+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig973.23812.1 ID=mRNA_P-canaliculata_contig973.23812.1|Name=mRNA_P-canaliculata_contig973.23812.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5718bp|location=Sequence derived from alignment at P-canaliculata_contig973:6051..11768+ (Pelvetia canaliculata dioecious)
CAGGGTGTCGGACAATCTGTGCAGGAGGTATCCGCTGCCGCGGAGAGATC
TGCGCTGAACGTCGACCGACAACGTAGAACGGGCAAGCAAGCTACAGGTA
CACGGGTTCGTACATCACTTGATGGTAGTTAGAGGGTGGATTGAAGGCAC
AAGCTCGTACATATACTCCTCCTCCGTCCATGCCAGCCCACCGGACGATT
CAGGTCTCCGAGAGTGGCGAGAGCGAATCAACCCCGCCGCCGCAAATCTC
TGCGTCCCCGCCCAACTCTCCCGCCGAGGCTTTCTTCCCCGCCCTCGCTT
CTGCGGGTCCTACGGGCGTCGCCATATCAGCCGCGAATCCCGGCTCCTAT
TTCCCTCCGACCGCACCGTCCAGCGTGTTCGGATCGGGTCCTGTTTCCAA
CAACCCCTTCGCGACGATGACCACGGCGGGTGCGCCTCCGCTCTCGAACG
ACGCTCTCAACCCCTCGTTCGGGATGTTCTCCCCGCCGATCCCGCCGACG
GGTGGGGGACCTCCTGCCGGATGGCATTCAGTGGCAGCATCGTTTGCCAC
AAGGGCGAATGATCTGGCTCGCAGGACGCTCGCGCGGTTTCAGGGGCCAG
GGTATGTGGGATCCGGGGCGTCCTCTGCGAACCAAGCGTTTAACTCTCCT
GTGGCACATAATTCCACACCTTCACCTTCCAGAGCGGGGTCTGAGCTTGG
AGGCTTTGTTGACATGGAGGCATCGTACGAGCAGGTATGTCGGGTACGCC
GTTGAAACTGGGTGCGAGTTGGGTGTTTTTGGTAATTAGATTAAATCGAG
TGCACTGGAAGGCATCTGATGGCCTCTCCTTCATCTAATTCATCAGCATG
GTTTCATACGGGTGGTGATATATAGTGTGTCTTTTTCCCTCCTTTCGTTC
CTCCGGTGTGACTTCGTAAGATAAATACTCGATTGAAGCTGGTGCTCGAG
AAAGTTGAAACTTCTCGTTCACGTACCCGCTGGGGCAGTGGTTTCCCGCG
TCATAATGGTAGGACTCCTCAAGCCTCGCATAATGGATCGAACGGCCGTT
TCGGCTTTTCCTCGCGACCCGTGCATTTGATCCGAGGTAGAGGCAAAATA
GGATCCGCGGCGCCAGCGCCTGGGGCAGCCTCGAGCCTCCGAACGATCTC
AACGCTTCGTTCGGAACAGATAGGGCAGCCGTCGTCGGGTCACCTTCAAG
CTTCACGGCGGCCGCAAGTACCTGGGCGCTCGCTGGGCCCGCCTGCTGCC
GCTGTCCGCAGAGGGCATCGTCGACATTCGGCACCTCAGATCTTTCGGCG
TCGGCCTTGATGGGGGCCGGAGCTGCGACTCGGGCGATGAAGGGCGCGCC
CGGGGTCTCCGATTTCGCGTCGTCTTCGAACCCTGTCACCACCGCTGGGG
CGGCGCAAGGGTCATACATGCCATCGACGACGATTTCCGACCGCTGCACC
ACTTGCGGTGGCTCTTTATCTAGCGCGAATGTTTCGTCCGAGGGCCTCAA
CACCGTCGGTTTCGGTGGATGGGGGGAAGAAGGTTCGAGGGGCCTCAGCA
CGGGGGACCCGCCGTGGCGAGCGACTTGGGAGGAAGGCTTCGACAACGAG
AGCGCGCTTGGTGGGGGGCTGCTAATGTCCTTGTCGGCCATGGAGGTGAA
AGGGATCGGTCGAAACCGAAAGGCTTACCCTATCTGGCTGTTGCCACGAT
TCATCTGGCCGATGAGCGAAGTGTTACAAGCGCCAGGACACGAGAAATGT
GTGTGTGTTTTTCAAGCGCCCCGACTTTCCTCGCCCCTCCTCAACCCTAT
CCCGACCCCGCGTTCTATTGTAAGACGCTCTAACTTATTAAAGCTTTCTG
GCCCCGCAGGAGTACGAGGGCAAAAGCCACGAGGAAAGCCGCCTGGAGGA
CTATGCCCGGAATCGCAAGAACAATCTGGCCGTTGGTGCGTTTGAACAAT
TACTCTTTCCTATTGCAAGCGCTGGCAAGGCGAGGCGCGGCGCCGCGTTA
CCCGACCGGAGGACAGCGTGTCAAAGTTTTCCACGTGTTTTTAGGCGTCC
GCCGTGCGTGGCATCCTTCACATTCGTGTTGTTCCGGTTGAAAAGAGTCC
CCACCCCGCGTACCCGACCGATAAAATACGGATCAGGTTGTGGTCCCCTC
GACGGCGCGACTCCCAAAAGTCTCCCGGTCGTTGTTGACGGCTTTGTGTT
CGCGGTACCTTCGAAGCGCCGGGGGACCGGGAACCCGGCGTGGCAAGCGA
CTCCGACTCGAGATCAGATCGGTTCGAGCGTATCCATGTCAAATATTATG
TCGATCTCTGCAATGTGGGTGAGCCTACCGGTAATGCTGGGGGAAGGGTT
GCGTAACTCTGTAAGACATTGCGTGCTTTCGTAAACTTCAGGCCGCCCAC
CCTGCTCTTCGGCGGACTTGGCGCACGTGCACGGTCGCGATCGGGAGTTC
GAAATCGAGGAAGGCGTTCCTATGATAAAACACGAGAAAAGCCGCTACGA
GTGCTCGTACGTACACATAGTGGTTTCCCATCACGACCAAGCCTGACTTC
ACGCGCGTCCGACAGTCTTGTCTCCACGTCTTAGTATGCTGTATCATTGT
TATACACCGTTAAATATATTCCAAGCTCTCTCTTATTTTTTCGTTGTGGC
TCCAAACGAAATGTCCCTTCCCCGGGAGCGCAGGACTACAGAAACGAGAG
TCACGAGGAGCTCCGACTGCAGGACTACACGGAGAACAGCCGGGGCTGCT
CGGCCAAGGGTACACCACCGAACGTGTCTCTAGAACTCGATTTTATCATC
CCTTGCATGCCGTTTCTCATTCCTTGCGAATTTGCTTGAAAAAAAAAAGC
AAGCAAACAAACAAGCAATCGCCGACTGCAGAGAAGAGGGGGAAAATAGC
AAAGACGCCGAAACACCCTGCGACGCTGGGTTCTTGTTTGTCGGCCAGAC
GATACCGACCGCCGCGGCGAGCCGACTAGACAAGGAGAAAAGAGGAACGA
TCCGGAGTGGCAAGAAACGGATACAGGAGCTTTCGTTTTCGTCTACCCTT
TCTTGATGTCAATCTCTGCCATGGCGGTGAGATCCTGCACCGGAGAAGTC
GATGTTTTCTCTGCTTGCTGTTTTATTTAAGTCAGGACAAGAGAGGTAAG
GGTGTTTGTGGAGGAGGGGGAGCTCCAGTGGAATTTGTTGCTGCCGAAAG
GGCCTGTTTTCAATACGAACCCCCCCCTGCTCGTAACCGTCGCATGACTA
CTGTTGTGTCGTCAACCTTTATTTATGTCACAGCAGTAGTCTGTTTTTCA
CGGATGTCGATCTATAGCGCTCTTGCATACGGTATACTTTCGCACCAGGA
TCGAACCAAACAAGCTTTTCCAAGGGTACAACCCCAAAGAATCCCCGCAA
CCCGATGAGCAAAGGCAAAAACTAAAAAGATTGGCGTTGTCCAGTCTTCC
CCTCTGACGCTTCACGTTACCTCAACATTCTGTCCAGCCACCGGGATTCG
AGTTGAATTTATGCCTTCTTTTTCCCTCGCTCCGTGGTTCGCGTGTTTTA
ATACTGTAATGCTGCGCGTCGCTACTGCACACGGCGCGCTTTTCAACCCA
TAACATTCTCCTTCTCCCTTGTGAAGTCAGGCCTACCAAAGCAAGAGCCA
CGAGGAACTAAGGCTTGAGGACTATCTCAGAAGCCGCGAAGAAATCTCCA
CAGACGCACCGTCACAAGGTAGCGCGGTCGTGTGCAACCACGAGCTCCCG
TACCTAGATGCTGAACACCGTGACCCGAAGTTCTTGGTAAAGATGCTCCT
CGTGGAATGAAATGTGCGCGCTTTTGGGCTTCAGCCATTCGACACGCCGA
ATCCATCCCCTTTCAACCAGGCAGCTCTGACGTTCCCGAGGCGTTGACGA
CGACGACAACTCCCGCCGCGAAGAGTAGCCTTACGAGCGCGGTGCCACCC
CAGCAGAAGGGCACGGGGGACCCCGCGTGGCAACCGCTTCTGATGGATGT
AAAACCGGCCGTGTTTGCCCAAGTACTCATGTCTATCTCGGCCATGCAGG
TGAACAGAAAATCCTTCGTTCTCGCCTGTGCAGCTGTCTGTCCGCGGCTA
TCAGCTGACTTGTAACCCCCGACGCGGGCGAGTGTAAATACAGTATGTTC
AAATGATGCTTAGAGCTATCTTGAAATTGAAACACCGAAAATACGCTCTT
TCCCGTCCAAACGAGACGGTTTCCCCTTTTGACGAGAACCCTGAGCAGCC
GTGAGTCGATTTTTGTGAGCCTAACAGGTCGCCGCAGAATCCGCAAAAGC
AATCTGCAGTAAGAGCAGCCACCGTTGCGAAGGGAGTAGTTGGTATTGGC
GATTGCCTCTCGCTGAAAGGGTGCTCTAGGTGTTCCGGGGAGGGGAGTTC
CACACACTCCCAGTTAAGGGTAACAGTCTCGATTACTCCAACAACACGAA
CGCTCCCTCTTCACGAAGATAACTCTTTAACGGTGGTAGGATGCTTTGGC
TTGCTCTTGATTTTTCGTCCGAGTAGCACGCCTGTCCCGGTCTGCGCTTC
AAAGCGTCTCCTGTTTTTTTCAGGGCCAACTGTCACTCATTAGAGCACGG
TGTGTACTATCCAACACGGTTCCGCTTGTTTCGCGACCACCTTCCGCTTG
CGTTGGCGTCCGCAGGCGTACGCCACCATGAGCCACGAGGAACTTCGGCT
CGAGTACTATCTCCAGAACCGAAAGTAAATGCCTTCAATCGATCACAAGG
AGCGCTCTCGACGGGCGCGGGCGATGGTTTTGCTGGTGCTGGCAATGCTG
TTGCCTTTTCGCGATCTGAGATGAACTGGTAACCGTCGCGCGGTCGAGAA
TTTATGCTGTTCCCCGCAGAGAGGTCGGGGATTCATGTTATTCCCCTCCG
AAAGGTCGGGCGACGCTCACATCCCAGCGAAGGAGAATCGGTCGATTCCC
GCGAAGGCCGAGCTTCCGTGGTCGGCCGTTGTGTCGAGGTGGTGCTTACG
TGAAAGTCCGGCGTCGGCTTTGTCGAGACCTCGTGCCCTCCCACCTCTTT
CGGCGACGCCCATTGATGCGAGAAGTATATCCCGAGCTGAACGACCGGGC
GATACACGCGGTGCTCCAGTATATATGTACATTTCTAGCTATTTTGCGCG
GAGGTGCTTAATGCGCACAGCGAGTCAGTAGACTCTACAACGATTGAAGT
GAGTTGGTCGGAAGGAAGGCTTGACCAGTGGATGTTGGCATCCTCGCAAC
GGTTGCACGCACGGCCTGCTTCTGCTTAACGTGATGTTGAGTCGTTGGGC
TTTCTAGCTTTAATTCCCACGTCATGCTCCTGCTCTTCATGCTTTTGCTA
TTGTAATAGAGAAAGGAAAAACGTTTCACAATTGGGTTTCGGCGTTTCTT
TTGCTCGTGTCATTTCTTGTCCCCGAATCGCCGCGACAAAAAAGTAGGTA
TGAGACAAACGACTTAATCGGTGCTTCAAAGGTGCGAGGAAAGGTCACAT
CAAACCGACAGATAAATGTCTCGCTTTCGTAGTTCTCTCGCAGTAAACGA
GTCTTGAACGTGAATCATAGTACTGTAGTAATAACTTTTACTTGCCATTT
CACGTACAGTATCTCAAGTCTCGAGGTAAGTACAACGATTGAAGTGAGTT
GGTCGGAAGGAAGGCTTGACCAGTGGATGTTGGCATCCTCGCAACGGTTG
CACGCACGGCCTGCTTCT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig973:6051..11768+ >mRNA_P-canaliculata_contig973.23812.1 ID=mRNA_P-canaliculata_contig973.23812.1|Name=mRNA_P-canaliculata_contig973.23812.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3804bp|location=Sequence derived from alignment at P-canaliculata_contig973:6051..11768+ (Pelvetia canaliculata dioecious)
ATGCCAGCCCACCGGACGATTCAGGTCTCCGAGAGTGGCGAGAGCGAATC
AACCCCGCCGCCGCAAATCTCTGCGTCCCCGCCCAACTCTCCCGCCGAGG
CTTTCTTCCCCGCCCTCGCTTCTGCGGGTCCTACGGGCGTCGCCATATCA
GCCGCGAATCCCGGCTCCTATTTCCCTCCGACCGCACCGTCCAGCGTGTT
CGGATCGGGTCCTGTTTCCAACAACCCCTTCGCGACGATGACCACGGCGG
GTGCGCCTCCGCTCTCGAACGACGCTCTCAACCCCTCGTTCGGGATGTTC
TCCCCGCCGATCCCGCCGACGGGTGGGGGACCTCCTGCCGGATGGCATTC
AGTGGCAGCATCGTTTGCCACAAGGGCGAATGATCTGGCTCGCAGGACGC
TCGCGCGGTTTCAGGGGCCAGGGTATGTGGGATCCGGGGCGTCCTCTGCG
AACCAAGCGTTTAACTCTCCTGTGGCACATAATTCCACACCTTCACCTTC
CAGAGCGGGGTCTGAGCTTGGAGGCTTTGTTGACATGGAGGCATCGTACG
AGCAGATGCCAGCCCACCGGACGATTCAGGTCTCCGAGAGTGGCGAGAGC
GAATCAACCCCGCCGCCGCAAATCTCTGCGTCCCCGCCCAACTCTCCCGC
CGAGGCTTTCTTCCCCGCCCTCGCTTCTGCGGGTCCTACGGGCGTCGCCA
TATCAGCCGCGAATCCCGGCTCCTATTTCCCTCCGACCGCACCGTCCAGC
GTGTTCGGATCGGGTCCTGTTTCCAACAACCCCTTCGCGACGATGACCAC
GGCGGGTGCGCCTCCGCTCTCGAACGACGCTCTCAACCCCTCGTTCGGGA
TGTTCTCCCCGCCGATCCCGCCGACGGGTGGGGGACCTCCTGCCGGATGG
CATTCAGTGGCAGCATCGTTTGCCACAAGGGCGAATGATCTGGCTCGCAG
GACGCTCGCGCGGTTTCAGGGGCCAGGGTATGTGGGATCCGGGGCGTCCT
CTGCGAACCAAGCGTTTAACTCTCCTGTGGCACATAATTCCACACCTTCA
CCTTCCAGAGCGGGGTCTGAGCTTGGAGGCTTTGTTGACATGGAGGCATC
GTACGAGCAGAGGCAAAATAGGATCCGCGGCGCCAGCGCCTGGGGCAGCC
TCGAGCCTCCGAACGATCTCAACGCTTCGTTCGGAACAGATAGGGCAGCC
GTCGTCGGGTCACCTTCAAGCTTCACGGCGGCCGCAAGTACCTGGGCGCT
CGCTGGGCCCGCCTGCTGCCGCTGTCCGCAGAGGGCATCGTCGACATTCG
GCACCTCAGATCTTTCGGCGTCGGCCTTGATGGGGGCCGGAGCTGCGACT
CGGGCGATGAAGGGCGCGCCCGGGGTCTCCGATTTCGCGTCGTCTTCGAA
CCCTGTCACCACCGCTGGGGCGGCGCAAGGGTCATACATGCCATCGACGA
CGATTTCCGACCGCTGCACCACTTGCGGTGGCTCTTTATCTAGCGCGAAT
GTTTCGTCCGAGGGCCTCAACACCGTCGGTTTCGGTGGATGGGGGGAAGA
AGGTTCGAGGGGCCTCAGCACGGGGGACCCGCCGTGGCGAGCGACTTGGG
AGGAAGGCTTCGACAACGAGAGCGCGCTTGGTGGGGGGCTGCTAATGTCC
TTGTCGGCCATGGAGAGGCAAAATAGGATCCGCGGCGCCAGCGCCTGGGG
CAGCCTCGAGCCTCCGAACGATCTCAACGCTTCGTTCGGAACAGATAGGG
CAGCCGTCGTCGGGTCACCTTCAAGCTTCACGGCGGCCGCAAGTACCTGG
GCGCTCGCTGGGCCCGCCTGCTGCCGCTGTCCGCAGAGGGCATCGTCGAC
ATTCGGCACCTCAGATCTTTCGGCGTCGGCCTTGATGGGGGCCGGAGCTG
CGACTCGGGCGATGAAGGGCGCGCCCGGGGTCTCCGATTTCGCGTCGTCT
TCGAACCCTGTCACCACCGCTGGGGCGGCGCAAGGGTCATACATGCCATC
GACGACGATTTCCGACCGCTGCACCACTTGCGGTGGCTCTTTATCTAGCG
CGAATGTTTCGTCCGAGGGCCTCAACACCGTCGGTTTCGGTGGATGGGGG
GAAGAAGGTTCGAGGGGCCTCAGCACGGGGGACCCGCCGTGGCGAGCGAC
TTGGGAGGAAGGCTTCGACAACGAGAGCGCGCTTGGTGGGGGGCTGCTAA
TGTCCTTGTCGGCCATGGAGGAGTACGAGGGCAAAAGCCACGAGGAAAGC
CGCCTGGAGGACTATGCCCGGAATCGCAAGAACAATCTGGCCGTTGGAGT
ACGAGGGCAAAAGCCACGAGGAAAGCCGCCTGGAGGACTATGCCCGGAAT
CGCAAGAACAATCTGGCCGTTGGTTGTGGTCCCCTCGACGGCGCGACTCC
CAAAAGTCTCCCGGTCGTTGTTGACGGCTTTGTGTTCGCGGTACCTTCGA
AGCGCCGGGGGACCGGGAACCCGGCGTGGCAAGCGACTCCGACTCGAGAT
CAGATCGGTTCGAGCGTATCCATGTCAAATATTATGTCGATCTCTGCAAT
GTGGGTTGTGGTCCCCTCGACGGCGCGACTCCCAAAAGTCTCCCGGTCGT
TGTTGACGGCTTTGTGTTCGCGGTACCTTCGAAGCGCCGGGGGACCGGGA
ACCCGGCGTGGCAAGCGACTCCGACTCGAGATCAGATCGGTTCGAGCGTA
TCCATGTCAAATATTATGTCGATCTCTGCAATGTGGGACTACAGAAACGA
GAGTCACGAGGAGCTCCGACTGCAGGACTACACGGAGAACAGCCGGGGCT
GCTCGGCCAAGGGACTACAGAAACGAGAGTCACGAGGAGCTCCGACTGCA
GGACTACACGGAGAACAGCCGGGGCTGCTCGGCCAAGGACGATACCGACC
GCCGCGGCGAGCCGACTAGACAAGGAGAAAAGAGGAACGATCCGGAGTGG
CAAGAAACGGATACAGGAGCTTTCGTTTTCGTCTACCCTTTCTTGATGTC
AATCTCTGCCATGGCGACGATACCGACCGCCGCGGCGAGCCGACTAGACA
AGGAGAAAAGAGGAACGATCCGGAGTGGCAAGAAACGGATACAGGAGCTT
TCGTTTTCGTCTACCCTTTCTTGATGTCAATCTCTGCCATGGCGGCCTAC
CAAAGCAAGAGCCACGAGGAACTAAGGCTTGAGGACTATCTCAGAAGCCG
CGAAGAAATCTCCACAGACGCACCGTCACAAGGCCTACCAAAGCAAGAGC
CACGAGGAACTAAGGCTTGAGGACTATCTCAGAAGCCGCGAAGAAATCTC
CACAGACGCACCGTCACAAGGCAGCTCTGACGTTCCCGAGGCGTTGACGA
CGACGACAACTCCCGCCGCGAAGAGTAGCCTTACGAGCGCGGTGCCACCC
CAGCAGAAGGGCACGGGGGACCCCGCGTGGCAACCGCTTCTGATGGATGT
AAAACCGGCCGTGTTTGCCCAAGTACTCATGTCTATCTCGGCCATGCAGG
CAGCTCTGACGTTCCCGAGGCGTTGACGACGACGACAACTCCCGCCGCGA
AGAGTAGCCTTACGAGCGCGGTGCCACCCCAGCAGAAGGGCACGGGGGAC
CCCGCGTGGCAACCGCTTCTGATGGATGTAAAACCGGCCGTGTTTGCCCA
AGTACTCATGTCTATCTCGGCCATGCAGGCGTACGCCACCATGAGCCACG
AGGAACTTCGGCTCGAGTACTATCTCCAGAACCGAAAGTAAGCGTACGCC
ACCATGAGCCACGAGGAACTTCGGCTCGAGTACTATCTCCAGAACCGAAA
GTAA back to top
|