mRNA_P-canaliculata_contig9724.23810.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9724.23810.1
Unique NamemRNA_P-canaliculata_contig9724.23810.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: D8LIZ2_ECTSI (Oligopeptidase A (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ2_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 1.340e-133
Identity = 187/226 (82.74%), Postives = 204/226 (90.27%), Query Frame = 1 
Query:    7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQ 678
            +ERRKEELYAFSEE+LRPYF LP+    MFDLAGRLFGVS+T ADGEAE WNPDVRFF+IKD  SG+HVASFYLDAYSRPENKRGGAWMGVC+G S+ALGR PVAYLTCNGSPPVG+TPSLMTFRE       VETLFHEFGHGLQHMLT M DGDC+GI+G+EWDAVELPSQFMENWCYH+PTVDQFA+H+ET ETLP +LF+KLCAQRTYMAGSAMLRQLYFGQ
Sbjct:  387 SERRKEELYAFSEEDLRPYFSLPEVLEGMFDLAGRLFGVSITPADGEAEVWNPDVRFFNIKDTASGEHVASFYLDAYSRPENKRGGAWMGVCIGASKALGRSPVAYLTCNGSPPVGDTPSLMTFRE-------VETLFHEFGHGLQHMLTTMVDGDCAGINGVEWDAVELPSQFMENWCYHKPTVDQFAKHHETGETLPKELFDKLCAQRTYMAGSAMLRQLYFGQ 605
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BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A6U4CXW2_9STRA (Oligopeptidase A n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CXW2_9STRA)

HSP 1 Score: 320 bits (821), Expect = 2.420e-102
Identity = 149/227 (65.64%), Postives = 183/227 (80.62%), Query Frame = 1 
Query:    7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            +ER++E+LY++++EELRPYF L +    +F LA RLFGV++  A+G+AE W+ DV F+ +KD  +G+H+ASF+LD YSRP  KRGGAWM VC+GRS+ L R PVAYLTCNGSPPVG+ PSLMTFRE       VETLFHEFGHGLQHMLT +EDGD +GI+ +EWDAVELPSQFMENWCY + T+  FA HYETNE LP DLF+KLC  R +MAG+AMLRQLYFGQ+
Sbjct:  364 SERQREKLYSYTDEELRPYFSLGKVLPGLFGLAERLFGVTIEEANGDAEVWHEDVSFYKVKDTTTGEHIASFFLDPYSRPAEKRGGAWMDVCIGRSKVLSRKPVAYLTCNGSPPVGDKPSLMTFRE-------VETLFHEFGHGLQHMLTDVEDGDAAGINNVEWDAVELPSQFMENWCYDKKTLMGFAVHYETNEPLPDDLFQKLCDSRHFMAGNAMLRQLYFGQM 583
[Close]
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A812XK02_SYMPI (OOP protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XK02_SYMPI)

HSP 1 Score: 310 bits (795), Expect = 9.500e-102
Identity = 147/226 (65.04%), Postives = 171/226 (75.66%), Query Frame = 1 
Query:   10 ERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            ER KEE YA+ EE LRPYF LP+    MF +A +LFGV +   D  AE W+PDV FF +KD  + DH+ASF+LD Y+RP  KRGGAWM  C+GRS+A+G  PVAYLTCNGSPPVG  PSLMTF EA       ETLFHEFGHGLQHMLT +EDGDC+GI+ +EWDAVELPSQFMENW YH+PTVD FA HYET E LP+D+FEK+   R +MA S MLRQL FG +
Sbjct:  112 ERLKEEKYAYDEEALRPYFSLPKVLEGMFGIANKLFGVDIVQDDDAAERWHPDVMFFKVKDADTRDHIASFFLDPYARPGEKRGGAWMDDCLGRSKAIGTKPVAYLTCNGSPPVGTKPSLMTFSEA-------ETLFHEFGHGLQHMLTHVEDGDCAGINNVEWDAVELPSQFMENWLYHKPTVDSFAVHYETGEPLPADIFEKIKGSRIFMAASMMLRQLQFGAL 330
[Close]
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A7S1YUM4_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YUM4_TRICV)

HSP 1 Score: 306 bits (784), Expect = 1.070e-99
Identity = 150/228 (65.79%), Postives = 174/228 (76.32%), Query Frame = 1 
Query:    7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGR-LPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            +ER KE  +  +EEELRPYF LP     MF L  R+F V V AADGEAE W+PDVRFF++KD  +G  +ASFYLD +SRP +KRGGAWM VC+G+S A  R +PVAYLTCNGSPPVG+TPSLMTFRE       VETLFHEFGHGLQHMLT    GD +GI+G+EWDAVELPSQFMENWCY +PTV  FARH+ET E LP ++FEKL  Q+TY AG    RQLYFGQ+
Sbjct:  222 SERLKETKFDLTEEELRPYFALPAVLDGMFGLVRRIFDVEVVAADGEAEVWHPDVRFFNVKDASTGKRIASFYLDPFSRPADKRGGAWMDVCIGKSEACDRDVPVAYLTCNGSPPVGDTPSLMTFRE-------VETLFHEFGHGLQHMLTEASVGDVAGINGVEWDAVELPSQFMENWCYDKPTVYGFARHHETGEPLPEEMFEKLKEQKTYGAGMMACRQLYFGQL 442
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BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A836CFP0_9STRA (Oligopeptidase A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP0_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.640e-99
Identity = 157/229 (68.56%), Postives = 175/229 (76.42%), Query Frame = 1 
Query:    1 YRAERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            Y AER+KEELYAFSEEELRPYFPLP+    MF+ A  LFGVS+  ADGE ETW+PDVRFF + D  SG  +ASFYLD YSRPENKRGGAWM VC+GRS  L RLPVAYLTCNG+PPV + PSLMTFRE       VETLFHEFGHGLQHMLT +   D +GI+GIEWDAVELPSQFMEN+      V    RHY+T E LP DL  KL AQ+TYMA S +LRQLYFGQ+
Sbjct:  319 YWAERQKEELYAFSEEELRPYFPLPEVLGGMFETARTLFGVSIVPADGETETWHPDVRFFHVNDAASGARIASFYLDPYSRPENKRGGAWMDVCVGRSAVLDRLPVAYLTCNGTPPVADAPSLMTFRE-------VETLFHEFGHGLQHMLTKVPFADAAGINGIEWDAVELPSQFMENFVLEDALVTW--RHYQTKEPLPKDLQAKLKAQKTYMAASGILRQLYFGQL 538
[Close]
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: I2CQQ3_NANGC (Oligopeptidase A n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQQ3_NANGC)

HSP 1 Score: 314 bits (805), Expect = 6.460e-99
Identity = 149/227 (65.64%), Postives = 171/227 (75.33%), Query Frame = 1 
Query:    7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            AER KE  Y   EEELRPYF LP     +F L+ R+FG+ + AADGE E W+P VRF+ + D  S +H+ASFYLD YSRPENKRGGAWM VC G+SR LGR PVAYLTCNGSPPVG+TPSLMTFRE       VETLFHEFGHG QHMLT +  GD +GI+G+EWDAVELPSQFMENWCY +PT    ARHY+T E LP D+F KL A + Y AG  MLRQLYFG++
Sbjct:  464 AERMKEGKYGIKEEELRPYFALPNVLDGLFSLSRRIFGIEIVAADGEVEVWDPAVRFYKVLDAESQEHIASFYLDPYSRPENKRGGAWMDVCTGKSRVLGRKPVAYLTCNGSPPVGDTPSLMTFRE-------VETLFHEFGHGAQHMLTEVAHGDAAGINGVEWDAVELPSQFMENWCYDKPTFYGLARHYQTGEPLPEDIFAKLVALKHYNAGMTMLRQLYFGKM 683
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BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A812R6V4_9DINO (OOP protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812R6V4_9DINO)

HSP 1 Score: 306 bits (784), Expect = 1.060e-98
Identity = 144/226 (63.72%), Postives = 172/226 (76.11%), Query Frame = 1 
Query:   10 ERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            ER KEE YA+ EE LRPYF LP+    MF +A +LF V +   +  AE W+PDV FF ++D  +G+H+ASF+LD Y+RP  KRGGAWM  C+GRS+A+G  PVAYLTCNGSPPVG+ PSLMTF EA       ETLFHEFGHGLQHMLT +EDGDC+GI+ +EWDAVELPSQFMENW YH+PTVD FA HYET E LP+D+FEK+   R +MA S MLRQL FG +
Sbjct:  197 ERLKEEKYAYDEEALRPYFSLPKVLEGMFGIASKLFAVDIVQDNDAAERWHPDVMFFKVQDASTGNHIASFFLDPYARPGEKRGGAWMDDCLGRSKAVGTKPVAYLTCNGSPPVGSKPSLMTFSEA-------ETLFHEFGHGLQHMLTHVEDGDCAGINNVEWDAVELPSQFMENWLYHKPTVDSFAVHYETGEPLPADVFEKIKGSRIFMAASMMLRQLQFGDL 415
[Close]
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A7S2WWB3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWB3_9STRA)

HSP 1 Score: 301 bits (772), Expect = 4.450e-98
Identity = 144/229 (62.88%), Postives = 171/229 (74.67%), Query Frame = 1 
Query:    7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQ--FARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            +ER+ E L+ F EEELRPYF LP     +F L  R++GV +  ADGEA  W+PDV+FF + D+ SG+H+ASFYLD YSRPE+KRGGAWM VC+G+S+AL R PVAYLTCNGSPPVG+ PSLMTF E       V TLFHE GHGLQHMLT +  G  +GI+G+EWDAVELPSQFMENWCY   T+     A+HYET E LP   F+KLC Q+TY AG AMLRQLYFG +
Sbjct:   98 SERQSEALFGFEEEELRPYFALPNVLNGLFGLCKRIYGVDIVRADGEAPIWHPDVQFFRVMDEESGEHIASFYLDPYSRPESKRGGAWMDVCVGKSQALDRKPVAYLTCNGSPPVGDKPSLMTFNE-------VTTLFHETGHGLQHMLTQVMHGPAAGINGVEWDAVELPSQFMENWCYDESTLYDAGLAKHYETGEPLPRHFFDKLCEQKTYQAGMAMLRQLYFGAM 319
[Close]
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A7S2C0M6_9DINO (Oligopeptidase A (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2C0M6_9DINO)

HSP 1 Score: 305 bits (781), Expect = 1.240e-97
Identity = 147/229 (64.19%), Postives = 172/229 (75.11%), Query Frame = 1 
Query:    1 YRAERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            Y AER KEE +A+ EE LRPYF LP+    MF +A +LFGV++   D  AE W+PDV FF + D  + +H+ASFYLD YSRP +KRGGAWM  C+GRSRALG  PVAYLTCNGSPPVG  PSLMTF EA       ETLFHEFGHGLQHMLT +E+GD +GI+ +EWDAVELPSQFMENW YH+ TVD FA HYET E LPSD+F+K+   R +MAGS MLRQL  G +
Sbjct:  360 YWAERLKEEKFAYDEEALRPYFSLPKVLDGMFGIASKLFGVTIERDDAAAERWHPDVMFFRVLDSETKEHIASFYLDPYSRPGDKRGGAWMADCLGRSRALGTKPVAYLTCNGSPPVGEKPSLMTFSEA-------ETLFHEFGHGLQHMLTRVEEGDAAGINNVEWDAVELPSQFMENWLYHKATVDSFAVHYETGEPLPSDVFDKIKGARAFMAGSFMLRQLQLGAL 581
[Close]
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A6U6EF43_9STRA (Oligopeptidase A n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EF43_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.760e-97
Identity = 152/229 (66.38%), Postives = 174/229 (75.98%), Query Frame = 1 
Query:    7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGR-LPVAYLTCNGSPPVGN-TPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
            +ER KE+ +  +EEELRPYF LP     MF L  R+F + VTAADGEAE WN DVRFF + D  +G H+ASFYLD YSRP +KRGGAWM VC+G+S A  R +PVAYLTCNGSPPVG+ TPSLMTFRE       VETLFHEFGHGLQHMLT    GD +GI+G+EWDAVELPSQFMENWCY +PTV  FA+HYET E LP D+FEKL  Q+TY AG    RQLYFGQ+
Sbjct:  384 SERLKEKKFDLTEEELRPYFALPAVLDGMFGLVKRIFNIEVTAADGEAEVWNDDVRFFKVNDVETGKHIASFYLDPYSRPADKRGGAWMDVCLGKSEACNRDVPVAYLTCNGSPPVGDDTPSLMTFRE-------VETLFHEFGHGLQHMLTTASVGDVAGINGVEWDAVELPSQFMENWCYDKPTVYGFAKHYETGEPLPEDMFEKLKEQKTYGAGMMSCRQLYFGQM 605
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIZ2_ECTSI1.340e-13382.74Oligopeptidase A (Fragment) n=1 Tax=Ectocarpus sil... [more]
A0A6U4CXW2_9STRA2.420e-10265.64Oligopeptidase A n=1 Tax=Phaeomonas parva TaxID=12... [more]
A0A812XK02_SYMPI9.500e-10265.04OOP protein n=1 Tax=Symbiodinium pilosum TaxID=295... [more]
A0A7S1YUM4_TRICV1.070e-9965.79Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A836CFP0_9STRA1.640e-9968.56Oligopeptidase A n=1 Tax=Tribonema minus TaxID=303... [more]
I2CQQ3_NANGC6.460e-9965.64Oligopeptidase A n=1 Tax=Nannochloropsis gaditana ... [more]
A0A812R6V4_9DINO1.060e-9863.72OOP protein n=1 Tax=Symbiodinium necroappetens Tax... [more]
A0A7S2WWB3_9STRA4.450e-9862.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C0M6_9DINO1.240e-9764.19Oligopeptidase A (Fragment) n=1 Tax=Alexandrium an... [more]
A0A6U6EF43_9STRA1.760e-9766.38Oligopeptidase A n=1 Tax=Odontella aurita TaxID=26... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9724contigP-canaliculata_contig9724:6375..11521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.0
Seed ortholog evalue1.2e-107
Seed eggNOG ortholog2880.D8LIZ2
Preferred namePRD1
KEGG koko:K01392,ko:K01405,ko:K01414,ko:K13726
KEGG Pathwayko04614,ko05143,map04614,map05143
GOsGO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005773,GO:0005794,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0012505,GO:0016787,GO:0019538,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGsCOG0339@1,KOG2089@2759
EC3.4.24.15,3.4.24.37,3.4.24.70
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons5
Model size693
Cds size693
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9724.23810.1prot_P-canaliculata_contig9724.23810.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9724 6375..11521 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817336.4805546-CDS-P-canaliculata_contig9724:6374..65061622817336.4805546-CDS-P-canaliculata_contig9724:6374..6506Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 6375..6506 -
1693495231.2309942-CDS-P-canaliculata_contig9724:6374..65061693495231.2309942-CDS-P-canaliculata_contig9724:6374..6506Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 6375..6506 -
1622817336.4918885-CDS-P-canaliculata_contig9724:7417..75921622817336.4918885-CDS-P-canaliculata_contig9724:7417..7592Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 7418..7592 -
1693495231.2437305-CDS-P-canaliculata_contig9724:7417..75921693495231.2437305-CDS-P-canaliculata_contig9724:7417..7592Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 7418..7592 -
1622817336.502874-CDS-P-canaliculata_contig9724:8557..87441622817336.502874-CDS-P-canaliculata_contig9724:8557..8744Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 8558..8744 -
1693495231.2554507-CDS-P-canaliculata_contig9724:8557..87441693495231.2554507-CDS-P-canaliculata_contig9724:8557..8744Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 8558..8744 -
1622817336.513545-CDS-P-canaliculata_contig9724:9523..96401622817336.513545-CDS-P-canaliculata_contig9724:9523..9640Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 9524..9640 -
1693495231.2722151-CDS-P-canaliculata_contig9724:9523..96401693495231.2722151-CDS-P-canaliculata_contig9724:9523..9640Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 9524..9640 -
1622817336.5243142-CDS-P-canaliculata_contig9724:11439..115211622817336.5243142-CDS-P-canaliculata_contig9724:11439..11521Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 11440..11521 -
1693495231.28183-CDS-P-canaliculata_contig9724:11439..115211693495231.28183-CDS-P-canaliculata_contig9724:11439..11521Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9724 11440..11521 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9724.23810.1

>prot_P-canaliculata_contig9724.23810.1 ID=prot_P-canaliculata_contig9724.23810.1|Name=mRNA_P-canaliculata_contig9724.23810.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=231bp
YRAERRKEELYAFSEEELRPYFPLPQARMFDLAGRLFGVSVTAADGEAET
WNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALG
RLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLT
AMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPS
DLFEKLCAQRTYMAGSAMLRQLYFGQVRRP*
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mRNA from alignment at P-canaliculata_contig9724:6375..11521-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9724.23810.1 ID=mRNA_P-canaliculata_contig9724.23810.1|Name=mRNA_P-canaliculata_contig9724.23810.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5147bp|location=Sequence derived from alignment at P-canaliculata_contig9724:6375..11521- (Pelvetia canaliculata dioecious)
TACAGGGCGGAGCGCCGCAAGGAAGAGCTGTACGCCTTCAGCGAAGAGGA
ACTCCGACCCTACTTCCCCTTGCCCCAGGCACGTTTTATAAATTATTAAA
TATATATATATGTATATTTAATATTTAATGTATTCATTACTGGTACAGTA
TTGTAGAGCTGTTTTACTGTTGTCTTGTGTACATTAGATTCGTGTCGCTT
TATTTATTTATTGAATTATCAAATAAGCTGGTGTCAAAATCCAGCCCGTG
GTCACAAGGTGGAAAAACACCATCCGGAAGGAAAACGTACAAGGTACTCT
CCGTACTAATAATAAGATAATATGGCAATGATACAAAAATACTCGGAAAA
AGGCGACACCTCCAAAGAAACAAAAAAAAGGCAAAACAAAAGAGGACACG
GACAGTTGTTAGCTCACTGCGTGTGGCTGCCGGGGCGCATGGATATACCG
AAGAACGATTGAATGAAGGGCCGCGGCTTCAACGAACGTAAATAGGCGAA
GACGAAACAAAACCAAGGCAACGCCAGAGAAAGACAACACGACATGTGCA
AACCAAAAAAGAAAAACGAGGATACAAGTTTCGCGCCACTTGTGGCGAAT
CAACTTTGGCGAGCGAACTAGCACGAGCACGCTTGCTTTGGAATATCCTG
TCCTTGATCCTTCCCGTCACGTTCGAGCATGCTACTATTAGTACCGCATG
CCGGATATCCTGTCCTTGGTCCAGCCCTGACTTTCTCTGCAGCGATCAAT
TTCGCCATGAAACATTCCACCCCTTGTTCCGCCATCTTGCGCCATTCCCC
CTTTTCCTGGGCTGCGGTCGTCCACCGGTCGGCGTTGATACCGAAAACTC
TGAGGTCGTCCAGGAGACACCCCGTCCACTTTTTTTCCTGGCCCCCCACG
CAGCCCACGCCCCCCACCAGTTCTCCGAACATGACGCACTTCGGCAGTCT
CGTGTCCTCCATGCGCGCCACAAATCCCGCGAGCAAGATTCGCCTCCTGC
GTGTAATGATCGCCTCTACTAGACGCTCTCACTTTATAATAGTACTGGTA
TTGGTTGTATGTTTGATTGATTGATTTGTATTTTCAGGGCATTGAAAGAT
CCCCCCCTCCATCCATCCCCCCCCTGCCTCCCCCCTCGGCTCATATACGA
AAACCAGATTTATCTTGGGCATATATTGCCTGGGACTGAACAGTCGTTCG
AAGTAATAATTAGCGTTGAAGACCAAAAAAAGGTCACCCATGTAAGGCGT
AAAAGTTCATGTTCAAAATTCACGAACGTAAAGCTGTCACATGGAAATTC
ATGTACATTAAAAAATATCACGTGCTGGATGTACTGATAGTAAGATTATA
CCAGGGAGCTGGTGTTGACTTTTTTTTTGCAGGAATTTCAGTTTTTACAT
TCTCGGTAAAAAAGAAAACTGAGACATTAAATCCCAAGTAAAACAAAAGT
GATGTTTGCAGTACTGTACGAAGCATATTTGTTCTTTGCCGATGGAGCAG
TTCAACGTGCTAGATATTTACCAATCCCACCTACAGCAACGCTGCCCATC
CCGCCTACCGTCGTCCTCTGGAGAGGGGATCTGTTTGCCTGTCTCCCCCC
CTCCCTCTTTCCCCCCGGTTCACCCCTACTATACAACGAACGCTCTTTGC
ATCCCATCACGACCCAAGCTCAGCACTCGCATGCCCCGTGAGCCGATGGC
TCAAACCGCTGGCTGCGGATGTCCTGTAGTACATACTATTATCTATATCA
TTGGAGTTCACCTGACCTCAAGGAGCCAGCGAATTGCTCGGCTGCACGTT
TCTAATCCCATAAACGATACGGGACTCGAAAATTTTAATTTGAGTGGGAA
ACGTTTTTGTGGTTTTCGTAGGTGTTGGAAGGGATGTTCGACTTGGCGGG
ACGCCTGTTCGGGGTTTCCGTCACCGCTGCCGATGGGGAGGCGGAAACCT
GGAACCCGGACGTGAGGTTCTTCAGCATCAAGGACAAGGTCTCAGGAGGT
CAGCCACGCTTCTCGGTGATGCTGTTTATTTTTTCGATTTTCTTCTTTTG
TTTATCATTTTTGGGTTTTGGTTTTATTCTTCCGTTTTTCAATTTTATTT
TTCGTTTTTATTTTTCGTTTATATTTTTCGTTTTTCGTTTTTGTGTTTCG
TTGTTCGTTTTTCGTATTTCGTAATAACTCTAATTCCCGATTCATTTTCC
CTCGAATATGTGGTCGGTCGGATCTCGTGGTGGGTATTGACTTCTCTGGC
CTCGCCACCTATCGCCGTTCTAAGGAAAACGCCTGGTTAAAAACAAAAAC
AAAAAAAATCTAGGTTGCAAAAAAAATGGTTTTGCCAAAATCCCATGCAT
ATATAGCTATTATCGCTAAAGGTTCTGTAGATGGCTAGCGATCATATATA
GCCTGACGTTGTCGGAAAAAATCAGGGAACTGTTGCGACCTCTCGCTCAT
CGCTGCAGTATACACTGTAGTACAGTCATTTACCGCAGTAGTACATGAAT
TGCCGTGATAACTATCGATATTAATGCAATATGGCAAGTTTAACCGTTTT
TAGCATTCGGGCGCAAATTATACATGGTACTATCAAATATTAGATAGTCT
CAATTTTTTGGCTGGAAAAGTATATATACTCCTATAGTAAAGAACGGGTA
TTCGTCCCACTGTACGAGGGTTTGAAGGAGGTGGGTGCTCCCCTCCCTGT
AACGATTTCCAATGATGCCGTTCTCCTCCTCGCGGTGACCATGTAACCAA
TGACGCAACCAATGACGCCGTCCTCAGATCACGTGGCGAGCTTTTATCTG
GACGCGTACTCGCGGCCAGAGAACAAGCGCGGAGGGGCCTGGATGGGCGT
GTGCATGGGGCGGAGCCGGGCGCTGGGCAGGCTCCCCGTCGCCTACCTGA
CGTGCAATGGGTCTCCGCCGGTTGGGAACACGCCGAGCCTCATGACCTTC
CGCGAGGCGAGAGAGTCGGCTGCACAGTACTTGAAAAGTGACGTATACTG
CTTAGTATTAATAGTAATAGTGGTTTGGCCAACGACTAGTCATGCTCTTA
TTTTTTATCCTCTTGTTTCTACCCTTTTGAAAATATTTTTTCCCCCCTTT
TTCCACTTGTTTTCTGTGCTTTTTTTCTTTCGTTATCTTCATCCGTGTTT
TTACAAATGAACGGTATTTGTTCGACCAACGGCTAGTGCCATACTGATTA
ATAGTGGTTATGTTCTCACATCTCCGTTACGAGCAAAGATAGTTTGGGAG
TTAGGACACAAAGAAGGTCTAGGTGCGTTCTTATTTTTCTTTAAACATCG
GTCTCAATAACGTCGCTCGGGAGAGAGAGGGAAGAGAATACAGATGAGCA
TCATCAGAATATACGAACTCCTACAGGTATATGACTACTTCCCATACCCT
CCAGTAATGTCGATATATCTAATAAGTTCGACCACCGGCTAGAACCAATC
GTATTTTTTGTATCCCTTTTTTCAGCAATTTTTCTCTTTTTTCTACCCTT
ATTTTTTTATTTTCCCCTTTTTCCCCCATTTTTCCCGCCTTTTTCTGTGC
GTTTTATGGGGGGTTTTTTTTCGTGTTTCTCCTCACCCGTTCAAGGCGGG
GGGGTTGGGGAAGGTCATTGTGTACTGTAGAGGGAAGCGGATATCATTTT
AGAAAAAAACGTCGGAAATCTCACAGAAACTCTGTACTGTACAGCACACT
ACAATACGATAATTGTTTGCACTTTTGCACACAAAAAACAATAAAAACAT
GCCCGTCTTGTGTACACTATACACTTTACACTATCCTAGTATTAGTATGG
CACATTTATCTATACCTGGTATCTATTTTTTAGTTGATTGCCGCGCCTCG
GATTCAGGTCCCACCATCTCAACAGCGAACCTCTTCTCTGAGAATGGCTA
TTATAGTCCGTTAACACTGACACTCGAAGTGGGTCGCGACAGGTGGAAAC
GCTGTTTCACGAGTTTGGCCACGGATTACAGCACATGCTGACCGCCATGG
AGGACGGTGACTGCTCCGGCATCAGCGGGATCGAGTGGGACGCGGTCGAA
CTCCCATCCCAGTTCATGGAAAACTGGTGCTACCACCGACCCACCGTTGA
CCAGGTGACACATTTACACATACTACGTACATACATACTACATAGGACAT
ATATACTGCACACACAAAGCGAACGCGCAGCAACACCTTTACCTTGCAGT
ACAGTAAAGTATGTATGGTCTAGATCGGTCTAGATCGTCCCCTGTGCTGC
GGTATAGTACTTCACCTTACGTTACAGTACGGCACAGTAGGATGTTTGGG
TTAAGAATTAAACTACTGTTGTAAATACTGTTAGTTCTTAACGGTGGTAG
CGAAGAACGCGCAGTGTTTGACACGACTGTATCCGGAAAATTGGTCAATC
TTCACGACAAGGACAATCGTCACGACGACTTTGATCCCCGTTCAAATGGC
CATGGCGATGGTCATGAATGACAATGTGCATGTTAAGTTGAAAGATCGTG
CAAAACTTTGCTGGTCATCATCCATACATTTTATCGTTGATAGCTTTGTC
GTGACGATGATCATGACCATACTACATTTGACAGATGTCAAAGTCAGGTC
ATGGCAGCCTGAAATATTACGACAATTGTTTTGTCACTGTCATGAACCTC
TACATCGTCGTGACCATGCGATTTGTCTTTTTCGATCATTTGAGATGTCA
TGGCGGTGGTCACCAATCGTATCTCAAGTTATCACGACAAATTGTCGCGA
CCTTCCAACACTTTTTTACTATTCATAACGCCCGTGACAGATGCGCATGG
CTGTTGTCAGAACGCTTTGAAAGACATGACAACCACCAGTATACCCGCGT
TTGTCATGACAATGGTCATGACCTTTCAAGCTGTCACCCTCAACATCCTC
GCTTAGGTCTTTGAATTATTGATTATTTGCTATGCAAGAGGGTGTTAAGG
GTGAAATTGCTGCACACAACATCTACCCTATCCTCGGGTCTCCCTTTCCC
CGGGCACATGAATAGTTTGCCCGGCACTACGAGACGAACGAGACCCTCCC
GAGCGATTTGTTCGAGAAGCTGTGCGCGCAGCGGACGTACATGGCGGGCT
CGGCGATGCTCCGGCAGCTGTACTTCGGGCAGGTGCGTCGACCTTGA
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Coding sequence (CDS) from alignment at P-canaliculata_contig9724:6375..11521-

>mRNA_P-canaliculata_contig9724.23810.1 ID=mRNA_P-canaliculata_contig9724.23810.1|Name=mRNA_P-canaliculata_contig9724.23810.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at P-canaliculata_contig9724:6375..11521- (Pelvetia canaliculata dioecious)
TACAGGGCGGAGCGCCGCAAGGAAGAGCTGTACGCCTTCAGCGAAGAGGA
ACTCCGACCCTACTTCCCCTTGCCCCAGGCACTACAGGGCGGAGCGCCGC
AAGGAAGAGCTGTACGCCTTCAGCGAAGAGGAACTCCGACCCTACTTCCC
CTTGCCCCAGGCACGGATGTTCGACTTGGCGGGACGCCTGTTCGGGGTTT
CCGTCACCGCTGCCGATGGGGAGGCGGAAACCTGGAACCCGGACGTGAGG
TTCTTCAGCATCAAGGACAAGGTCTCAGGAGGGATGTTCGACTTGGCGGG
ACGCCTGTTCGGGGTTTCCGTCACCGCTGCCGATGGGGAGGCGGAAACCT
GGAACCCGGACGTGAGGTTCTTCAGCATCAAGGACAAGGTCTCAGGAGAT
CACGTGGCGAGCTTTTATCTGGACGCGTACTCGCGGCCAGAGAACAAGCG
CGGAGGGGCCTGGATGGGCGTGTGCATGGGGCGGAGCCGGGCGCTGGGCA
GGCTCCCCGTCGCCTACCTGACGTGCAATGGGTCTCCGCCGGTTGGGAAC
ACGCCGAGCCTCATGACCTTCCGCGAGGCGAGAGAATCACGTGGCGAGCT
TTTATCTGGACGCGTACTCGCGGCCAGAGAACAAGCGCGGAGGGGCCTGG
ATGGGCGTGTGCATGGGGCGGAGCCGGGCGCTGGGCAGGCTCCCCGTCGC
CTACCTGACGTGCAATGGGTCTCCGCCGGTTGGGAACACGCCGAGCCTCA
TGACCTTCCGCGAGGCGAGAGATGGGTCGCGACAGGTGGAAACGCTGTTT
CACGAGTTTGGCCACGGATTACAGCACATGCTGACCGCCATGGAGGACGG
TGACTGCTCCGGCATCAGCGGGATCGAGTGGGACGCGGTCGAACTCCCAT
CCCAGTTCATGGAAAACTGGTGCTACCACCGACCCACCGTTGACCAGTGG
GTCGCGACAGGTGGAAACGCTGTTTCACGAGTTTGGCCACGGATTACAGC
ACATGCTGACCGCCATGGAGGACGGTGACTGCTCCGGCATCAGCGGGATC
GAGTGGGACGCGGTCGAACTCCCATCCCAGTTCATGGAAAACTGGTGCTA
CCACCGACCCACCGTTGACCAGTTTGCCCGGCACTACGAGACGAACGAGA
CCCTCCCGAGCGATTTGTTCGAGAAGCTGTGCGCGCAGCGGACGTACATG
GCGGGCTCGGCGATGCTCCGGCAGCTGTACTTCGGGCAGGTGCGTCGACC
TTGATTTGCCCGGCACTACGAGACGAACGAGACCCTCCCGAGCGATTTGT
TCGAGAAGCTGTGCGCGCAGCGGACGTACATGGCGGGCTCGGCGATGCTC
CGGCAGCTGTACTTCGGGCAGGTGCGTCGACCTTGA
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