mRNA_P-canaliculata_contig1050.688.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig1050.688.1
Unique NamemRNA_P-canaliculata_contig1050.688.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: D8LF24_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF24_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 2.910e-162
Identity = 262/304 (86.18%), Postives = 272/304 (89.47%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASDWIDDRMWNEVQALSGLPAFEGLAESLMNRLLQDFKA 912
            VGDSTIPWN+QFRFFMTTKLSNPHYPPEVSVKVSLLNFAITF GLEDQLLGV VVEEMPEMQEKKN L VANAKM K+LQEIENRILF+LSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEK+ID NRE YRPVAYRGAIMYFCVRDFN VDPMYQYSLQWFTNLFVQ          GI LSEKSDVLEERLEELNNFFTYYVYTNVCRS FEKDKLLFSFLIT+R+LQ D LID NEWSFLISGKT TPVQAGENP  DWID RMW+EVQAL+GLPAFEGLA S    LL+DFK+
Sbjct: 3233 VGDSTIPWNDQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFTGLEDQLLGVVVVEEMPEMQEKKNTLVVANAKMKKELQEIENRILFLLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKEIDLNREGYRPVAYRGAIMYFCVRDFNVVDPMYQYSLQWFTNLFVQ----------GIRLSEKSDVLEERLEELNNFFTYYVYTNVCRSLFEKDKLLFSFLITVRVLQGDNLIDDNEWSFLISGKTYTPVQAGENPGPDWIDARMWSEVQALAGLPAFEGLAASFAGPLLEDFKS 3526          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A6H5JN05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN05_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 4.920e-139
Identity = 242/322 (75.16%), Postives = 252/322 (78.26%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNAL------------------AVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASDWIDDRMWNEVQALSGLPAFEGLAESLMNRLLQDFKA 912
            VGDSTIPWN+QFRFFMTTKLSNPHYPPEVSVKVSLLNFAITF GLEDQLLGV VVEEMPEMQEKKN L                   VANAKM K+LQEIENRILF+LSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEK+ID NRE YRPVAYRGAIMYFCVRDFN VDPMYQYSLQWFTNLFVQ          GI LSEKSDVLEERLEELNNFFTYYVYTNVCRS FEKDKLLFSFLIT+R+LQA                       GENP  DWID RMW+EVQAL+GL AFEGLA S    LL+DFK+
Sbjct: 2421 VGDSTIPWNDQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFTGLEDQLLGVVVVEEMPEMQEKKNTLDLHNWCMATVTQNVTNKNLVANAKMKKELQEIENRILFLLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKEIDLNREGYRPVAYRGAIMYFCVRDFNVVDPMYQYSLQWFTNLFVQ----------GIRLSEKSDVLEERLEELNNFFTYYVYTNVCRSLFEKDKLLFSFLITVRVLQA-----------------------GENPGPDWIDARMWSEVQALAGLQAFEGLAASFAGPLLEDFKS 2709          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A482RXV7_9ARCH (AAA_9 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXV7_9ARCH)

HSP 1 Score: 408 bits (1049), Expect = 1.120e-138
Identity = 203/298 (68.12%), Postives = 243/298 (81.54%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASDWIDDRMWNEVQALSGLPAFEGLAESLMNRL 894
            +GDSTIPWN+ FRFFMTTKL+NPHY PEV VKVSL+NFAITF GLEDQLLGV VVEEMPEM+EKKN+L ++NA+M K+LQE+E++ILFMLSNS GNILDDH+LIETLA+SK  S EIT KV EAE+TEK IDE+R  YRPVAYRG+I+YFC+ D   +DPMYQYSLQWF NLFVQA          I LS  +D +  RLE LN+FFTYYVYTN+CRS FEK KL+FSFL+T+RILQ D  ID  EWSFLISGKTL  V++  NPA+DWID+RMW+E+ +LS LP F+GLA  +++ +
Sbjct:   79 IGDSTIPWNDSFRFFMTTKLTNPHYAPEVCVKVSLINFAITFTGLEDQLLGVVVVEEMPEMEEKKNSLVISNARMRKELQELEDQILFMLSNSTGNILDDHKLIETLATSKVKSQEITAKVQEAEITEKQIDESRNMYRPVAYRGSILYFCIADLGSIDPMYQYSLQWFRNLFVQA----------IRLSTPADEIAVRLENLNSFFTYYVYTNICRSLFEKHKLVFSFLLTVRILQGDDKIDSTEWSFLISGKTLA-VESVHNPAADWIDNRMWSEITSLSTLPTFQGLANHIVDNI 365          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A7S1U4X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4X8_9STRA)

HSP 1 Score: 374 bits (960), Expect = 1.570e-119
Identity = 186/298 (62.42%), Postives = 231/298 (77.52%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASDWIDDRMWNEVQALSGLPAFEGLAESLMNRL 894
            +GDSTIPWN+ F+FF+TT L NPHYPPEV VKVS++NFAITF GLEDQLLG  V+EE+PEM+EKKN+L V+NA+M K+L++IE++IL+MLSNS GNILDD ELI+ LA SKK S EI +KVAEAEVTEK+ID+ RE YRPVAYRG+I+YFC+ + ++VDPMYQYSLQWF NLFVQA          I  SEKS+ L+ RL+ L +FFTYY+Y NVCRS FE  KLLFSF++T  +L+  KL+D  EW FLISGK L      ENPA +W+D RMW ++  +SG+P FEG A +    L
Sbjct:  252 IGDSTIPWNDSFKFFITTALPNPHYPPEVCVKVSIVNFAITFTGLEDQLLGTVVIEELPEMEEKKNSLVVSNARMKKELKDIEDKILYMLSNSTGNILDDVELIDALAGSKKKSQEIKIKVAEAEVTEKEIDKTREGYRPVAYRGSILYFCIAELSQVDPMYQYSLQWFNNLFVQA----------IRQSEKSEELQTRLDTLCDFFTYYIYVNVCRSLFETHKLLFSFVLTANVLKGSKLLDPVEWMFLISGKGLGAADV-ENPAPEWVDKRMWGDICEMSGVPVFEGFAATFAEDL 538          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: F0YHW5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHW5_AURAN)

HSP 1 Score: 367 bits (941), Expect = 3.610e-112
Identity = 198/294 (67.35%), Postives = 225/294 (76.53%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPA-----SDWIDDRMWNEVQALSGLPAFEG 867
            +GDSTIPWN+ F+FFMTTK+ NPHY PEV VKVSLLNFAIT +GLEDQLLGV VVEE P+M+EKKN+L VANA M K+L+EIE++IL+MLSNS GNILDDHELIETLASSKKTS EIT KVAEAE TE++ID +RERYRPVAYR  I+YF V     VDPMYQYSLQWFT LFV A          I L++ +D LE RLE LN+FFTYYVY NVCRS FEKDKLL SFL+TI+IL+    ID  EW FLISGK   P  A ENPA     S W+D RMW+EV  L G+  F G
Sbjct: 3207 IGDSTIPWNDSFKFFMTTKMPNPHYAPEVCVKVSLLNFAITPVGLEDQLLGVVVVEERPDMEEKKNSLVVANASMKKELKEIEDKILYMLSNSTGNILDDHELIETLASSKKTSQEITAKVAEAETTEREIDTSRERYRPVAYRATILYFSVVGLAVVDPMYQYSLQWFTALFVAA----------IRLADANDDLEARLEILNDFFTYYVYVNVCRSLFEKDKLLLSFLMTIKILEGAGDIDPVEWRFLISGKAPNPKTA-ENPAPEGAPSGWLDGRMWSEVLMLGGMEKFAG 3489          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A813ASK2_9DINO (DNAH1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813ASK2_9DINO)

HSP 1 Score: 346 bits (887), Expect = 6.710e-111
Identity = 174/293 (59.39%), Postives = 222/293 (75.77%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPAS-DWIDDRMWNEVQALSGLPAFEGLAE 876
            +GDS IP+N+ FRFFMTTKL NPHYPPEV+VKVSLLNF IT  GLEDQ+LGV VV E+PE++E+KN L ++ A M K+LQ++EN+ILF+LSNS+GNILDD  LI+TLA SK  S +IT KV EAEVTEK+ID  RE+YRPVAYR +I+YFC+ D + VDPMYQYSLQWF  LF            GI  SEK++ +E+R+  LN++FTY +Y NVCRS FE+ KLLFSFL+TIRI+Q D L+D  EW +LISG+T    +    P+   W+++R+W E+  L+ LPAF+GL E
Sbjct:  299 LGDSIIPYNDSFRFFMTTKLPNPHYPPEVAVKVSLLNFTITPKGLEDQMLGVFVVNELPELEERKNTLTLSMAAMKKELQDLENKILFLLSNSEGNILDDEVLIDTLAQSKTKSVDITAKVEEAEVTEKEIDNLREKYRPVAYRASILYFCITDLSNVDPMYQYSLQWFRGLFEN----------GIRDSEKAEEVEQRISNLNSYFTYLMYRNVCRSLFERHKLLFSFLMTIRIMQGDDLVDAEEWRYLISGQTNHKPEEAPRPSGITWLNERIWGELLTLNTLPAFKGLLE 581          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A835YSP2_9STRA (Dynein heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP2_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.450e-110
Identity = 191/317 (60.25%), Postives = 227/317 (71.61%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAG--------------ENPASDWIDDRMWNEVQALSGLPAFEGLAESLMNRLLQDFK 909
            VGD+TIPWN+ FR FMTTKL+NPHYPPE+ VKV+L+NFAITF GLEDQLLGV VVEE PEM+E+KNAL  ANA+M ++LQ+IE+RILF+LSNS GNILDDHELIETLASSK+TSTEI  KVAEAE TE +ID  RE YRPVAYRGAI+YFC+RD   VDPMYQYSLQWFT LFV A              E++  L++RL +L + FT +VY NVCRS FE+DK LFSFL+T+R+LQ    +D  EW FL+SG+     +                 NPA +WID RMW E  ALS LPAF  LA  +  R    F+
Sbjct: 2417 VGDATIPWNDAFRLFMTTKLANPHYPPEICVKVNLVNFAITFTGLEDQLLGVVVVEEAPEMEERKNALVAANARMRRELQDIESRILFLLSNSTGNILDDHELIETLASSKRTSTEIAAKVAEAEATEGEIDATRELYRPVAYRGAILYFCIRDLATVDPMYQYSLQWFTGLFVAAT----------RRGERAAALDQRLRDLRDGFTAHVYANVCRSLFERDKRLFSFLMTVRVLQGAGGVDAAEWRFLLSGEADAAARGDGDGGDSGSADPRELPNPAPEWIDARMWKETCALSLLPAFARLAADVCGRHRDAFR 2723          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A2P4XJE1_9STRA (Sporangia induced dynein heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XJE1_9STRA)

HSP 1 Score: 344 bits (882), Expect = 2.890e-106
Identity = 177/294 (60.20%), Postives = 223/294 (75.85%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASDWIDDRMWNEVQALSGLPAFEGLAESL 882
            +GDST+P+N  FRF+MTTKL NPHYPPE SVKV+LLNF IT  GLEDQ LGV V EEMPE+ EKKN+L VANA+M  +L EIEN+IL+ML+NSKGNILDD ELI+TL  +K TS +I  K+AEAE+TEK IDE+RERYR VA+R ++++FC+ D   VDPMYQYSL WF +LF+++          IH + +SD LE RL  LN+  TY +Y N+CRS FE+ KLLFSFL+TI++L   + ID  EW FLISG T + ++A  NP ++W++DRMW EV ALS LPAFE LA S+
Sbjct:  317 LGDSTVPYNPSFRFYMTTKLPNPHYPPETSVKVTLLNFTITPKGLEDQALGVVVQEEMPELAEKKNSLVVANARMKAELVEIENKILYMLANSKGNILDDTELIDTLGKAKVTSEDINEKMAEAEITEKAIDESRERYRGVAFRASLLFFCIADLALVDPMYQYSLPWFVSLFIKS----------IHSATESDQLEMRLAHLNDSATYSLYRNICRSLFEEHKLLFSFLLTIKLLMGSRKIDMLEWRFLISGSTASSIEA-PNPDTNWVEDRMWREVCALSSLPAFETLASSM 599          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A7S4E7T1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7T1_9STRA)

HSP 1 Score: 348 bits (892), Expect = 1.260e-105
Identity = 190/303 (62.71%), Postives = 214/303 (70.63%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASD-----WIDDRMWNEVQALSGLPAFEGLAESLMNRL 894
            +GDSTIPWN+ F+FFMT+ L NPHY PEV VKVSLLNFAIT +GLEDQLLGV V EE P+M EKKN+L VANA M KQL+EIE++IL+MLSNS GNILDDHELIETLASSK TST+IT             D  RERYRPVAYR  I+YF V +   VDPMYQYSLQWF  LFV A          I  +EK++ LE RL+ LN FFTYYVY NVCRS FEKDKLLFSFL+T++IL     ID  EW FLISGKT   V   ENPA +     WID RMW+EV A+SG   FEG A    N L
Sbjct: 1554 IGDSTIPWNDSFKFFMTSNLPNPHYAPEVCVKVSLLNFAITPVGLEDQLLGVVVAEERPDMAEKKNSLVVANASMKKQLKEIEDKILYMLSNSTGNILDDHELIETLASSKITSTDITEXXXXXXXXXXXXDAYRERYRPVAYRATILYFSVVNLCVVDPMYQYSLQWFQALFVAA----------ISKAEKAETLEARLDVLNTFFTYYVYVNVCRSLFEKDKLLFSFLLTVKILDGSNEIDATEWRFLISGKTTAAVDV-ENPAPEGNAGGWIDGRMWSEVCAISGAANFEGFAADFKNHL 1845          
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Match: A0A8J2SZZ7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZZ7_9STRA)

HSP 1 Score: 348 bits (892), Expect = 1.360e-105
Identity = 190/303 (62.71%), Postives = 214/303 (70.63%), Query Frame = 1
Query:    1 VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLLGVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDDHELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYFCVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERLEELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFLISGKTLTPVQAGENPASD-----WIDDRMWNEVQALSGLPAFEGLAESLMNRL 894
            +GDSTIPWN+ F+FFMT+ L NPHY PEV VKVSLLNFAIT +GLEDQLLGV V EE P+M EKKN+L VANA M KQL+EIE++IL+MLSNS GNILDDHELIETLASSK TST+IT             D  RERYRPVAYR  I+YF V +   VDPMYQYSLQWF  LFV A          I  +EK++ LE RL+ LN FFTYYVY NVCRS FEKDKLLFSFL+T++IL     ID  EW FLISGKT   V   ENPA +     WID RMW+EV A+SG   FEG A    N L
Sbjct: 3182 IGDSTIPWNDSFKFFMTSNLPNPHYAPEVCVKVSLLNFAITPVGLEDQLLGVVVAEERPDMAEKKNSLVVANASMKKQLKEIEDKILYMLSNSTGNILDDHELIETLASSKITSTDITEXXXXXXXXXXXXDAYRERYRPVAYRATILYFSVVNLCVVDPMYQYSLQWFQALFVAA----------ISKAEKAETLEARLDVLNTFFTYYVYVNVCRSLFEKDKLLFSFLLTVKILDGSNEIDATEWRFLISGKTTAAVDV-ENPAPEGNAGGWIDGRMWSEVCAISGAANFEGFAADFKNHL 3473          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1050.688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF24_ECTSI2.910e-16286.18Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JN05_9PHAE4.920e-13975.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482RXV7_9ARCH1.120e-13868.12AAA_9 domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S1U4X8_9STRA1.570e-11962.42Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YHW5_AURAN3.610e-11267.35Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A813ASK2_9DINO6.710e-11159.39DNAH1 protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
A0A835YSP2_9STRA1.450e-11060.25Dynein heavy chain and region D6 of dynein motor-d... [more]
A0A2P4XJE1_9STRA2.890e-10660.20Sporangia induced dynein heavy chain n=1 Tax=Phyto... [more]
A0A7S4E7T1_9STRA1.260e-10562.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SZZ7_9STRA1.360e-10562.71Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1050contigP-canaliculata_contig1050:24909..27220 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score515.0
Seed ortholog evalue2.4e-143
Seed eggNOG ortholog2880.D8LF24
KEGG koko:K10408
KEGG Pathwayko05016,map05016
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Hectar predicted targeting categoryother localisation
Exons5
Model size912
Cds size912
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1050.688.1prot_P-canaliculata_contig1050.688.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig1050 24909..27220 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.2214758-CDS-P-canaliculata_contig1050:24908..251131622815621.2214758-CDS-P-canaliculata_contig1050:24908..25113Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 24909..25113 +
1693494170.7965426-CDS-P-canaliculata_contig1050:24908..251131693494170.7965426-CDS-P-canaliculata_contig1050:24908..25113Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 24909..25113 +
1622815621.233784-CDS-P-canaliculata_contig1050:25342..254971622815621.233784-CDS-P-canaliculata_contig1050:25342..25497Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 25343..25497 +
1693494170.8218734-CDS-P-canaliculata_contig1050:25342..254971693494170.8218734-CDS-P-canaliculata_contig1050:25342..25497Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 25343..25497 +
1622815621.2451046-CDS-P-canaliculata_contig1050:25745..259401622815621.2451046-CDS-P-canaliculata_contig1050:25745..25940Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 25746..25940 +
1693494170.8341594-CDS-P-canaliculata_contig1050:25745..259401693494170.8341594-CDS-P-canaliculata_contig1050:25745..25940Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 25746..25940 +
1622815621.2576914-CDS-P-canaliculata_contig1050:26600..267561622815621.2576914-CDS-P-canaliculata_contig1050:26600..26756Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 26601..26756 +
1693494170.8456874-CDS-P-canaliculata_contig1050:26600..267561693494170.8456874-CDS-P-canaliculata_contig1050:26600..26756Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 26601..26756 +
1622815621.2736256-CDS-P-canaliculata_contig1050:27019..272201622815621.2736256-CDS-P-canaliculata_contig1050:27019..27220Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 27020..27220 +
1693494170.8558798-CDS-P-canaliculata_contig1050:27019..272201693494170.8558798-CDS-P-canaliculata_contig1050:27019..27220Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1050 27020..27220 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig1050.688.1

>prot_P-canaliculata_contig1050.688.1 ID=prot_P-canaliculata_contig1050.688.1|Name=mRNA_P-canaliculata_contig1050.688.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=304bp
VGDSTIPWNNQFRFFMTTKLSNPHYPPEVSVKVSLLNFAITFMGLEDQLL
GVAVVEEMPEMQEKKNALAVANAKMTKQLQEIENRILFMLSNSKGNILDD
HELIETLASSKKTSTEITLKVAEAEVTEKDIDENRERYRPVAYRGAIMYF
CVRDFNEVDPMYQYSLQWFTNLFVQARLASIKLYQGIHLSEKSDVLEERL
EELNNFFTYYVYTNVCRSFFEKDKLLFSFLITIRILQADKLIDGNEWSFL
ISGKTLTPVQAGENPASDWIDDRMWNEVQALSGLPAFEGLAESLMNRLLQ
DFKA
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mRNA from alignment at P-canaliculata_contig1050:24909..27220+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig1050.688.1 ID=mRNA_P-canaliculata_contig1050.688.1|Name=mRNA_P-canaliculata_contig1050.688.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2312bp|location=Sequence derived from alignment at P-canaliculata_contig1050:24909..27220+ (Pelvetia canaliculata dioecious)
GTCGGGGACTCCACTATCCCCTGGAATAACCAGTTCCGATTCTTCATGAC GACGAAACTCAGCAATCCGCACTACCCGCCTGAAGTTTCGGTGAAAGTCA GTCTTCTTAACTTTGCAATCACCTTCATGGGTCTGGAGGACCAGCTGCTG GGTGTCGCGGTGGTAGAAGAAATGCCTGAGATGCAGGAGAAGAAAAACGC CCTGGGTCAGTACAACGAGAGTCCAATCATGCACCCGAACATTGGAGGAG GCTTTCTGTTCCTCAGCACGCTCATCTACTATTCTGTCGAGTTTGCAATG CTTTCAGGAAATAGTGTGAAATCTCGCTTTTTACGGTACCTCGAGGGAGT TCTGCAGCTCATCAATTCTTATCTATCTCTTATGATGTGCCGTACATTGA GTTTGACTTTGGCGCAACCATTTCTCGCGACCAGCCGTTGCAAACGCGAA GATGACAAAGCAACTGCAGGAGATAGAAAACCGTATACTGTTCATGCTAA GCAACTCCAAGGGGAACATTCTGGACGACCATGAGCTCATCGAAACGCTC GCCTCCTCGAAGAAGACTTCGACAGAGATCACACTAAAGGTACAATAAAA TCCAGCACCTGTACATTACTCGCTATAAAACCTATGTATTACTAGTATTC AGGAATTCCCCTGTTCTTGGGCGCTGCTTGAGGTTTGATCAAACATCACT GAGGCGTCGCCACAAAGACTGGAAATACTAATGATAACGGGCCCTCACTC AAGGATATCGTCCAGATTGTGCGTTTAAAGCTCTCGCCATGCCTGAATTT CTCCATTTACCATGCAAACATGTAATAATGTACACAGGTGGCGGAGGCTG AGGTGACTGAAAAAGATATCGACGAGAACCGCGAGAGGTACCGCCCAGTG GCCTACAGAGGGGCTATCATGTACTTCTGCGTCAGAGACTTCAACGAGGT CGACCCCATGTACCAGTACTCGCTACAGTGGTTTACAAACCTCTTCGTGC AGGCAAGACTTGCGAGCATAAAGTTATACCAAGTAGTTAGTATTAATAGT GTGAAACTATAGTACGCTATAGTAACAACCACACGGGGAATACGATTCGT CGAACAGAGCTTTGGGGACGTTGACCACTCGTACACTTCCTCTCCGCCTT CGCGGTGACGTCACCTCGGCATCACAACTGGATATCTCGTTTTCTGGCGA TGATCGTGTCGTGAGAGTCGTTTACGCTATTTGTGGTGATTGCCCCAGGG CCTGTGATACTTATCCCGTGGTGTGGTTTTAAGTAACCTCCTCACGTGGA GGACTACTTGGCCTAGGTTTGTATCCAGTTGATTCAGCCCCTGTCCTCGC CGAATTCCTGAAGAGAATGCCGGTTGGAAAATATCGTGGTATGAAGTGCT ACGCTTCGTCAAAGTTTGAATCTATACATTACTACACCACTCTGAGCCAT CGAACGCCAATGTTACACTTGGTTGGTCACTTGATAGTTAAGCTCCGTGG GCAGAGAGTATTTGAGAAACACTTCCTCCGTGGCGATTACTAGTTGACCT GTCCTTGGAGGTATAATAGTTAACCTCCTTACATTAGGGGGTGTTGTAAG AACCATATACCCTGTCTGTGGTGAATGCCAATTGATTTTTAACCTCGTGA CCTACTAATAAACCTCCTGATCTCCTCACATTCGTGTTTCAGGGCATTCA CCTCAGTGAGAAAAGCGATGTTCTGGAAGAACGACTGGAGGAACTCAACA ATTTTTTCACCTACTATGTATACACGAACGTGTGCAGAAGTTTCTTCGAA AAGGACAAGTTGTTGTTTTCCTTCCTCATCACCATTAGAATTCTTCAGGT TTGTGCATGCCTTGCGACGGAGCGTCAAAATATGGTTTTGGTGAGAAATT GTCAGTTTTCGAGGACAAAAGTGTCTGAGTTCGTTAATCCTAAAGAAGGG CGCATTTTTAATGCACATGTTGCTTGTCTTCCACAATTATTTTGTTCAGT AAACAGTGTGCTGCCCGGTTGTGTCATCCGGATAGCACCTCTCATCACGT AATCGGCGTCGAAGTTCGAGTGACAAGTCCCTCGCAATCCCGTGCTGCCT TCATTCCTAAGGCGGACAAACTTATCGACGGAAACGAATGGTCATTCCTC ATTTCGGGCAAGACGCTTACGCCTGTCCAGGCCGGCGAAAATCCAGCTTC AGACTGGATCGATGACCGGATGTGGAACGAAGTGCAAGCACTGTCGGGGC TTCCCGCTTTCGAAGGCCTTGCCGAGAGCCTTATGAACCGGCTCCTGCAA GACTTCAAGGCG
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Coding sequence (CDS) from alignment at P-canaliculata_contig1050:24909..27220+

>mRNA_P-canaliculata_contig1050.688.1 ID=mRNA_P-canaliculata_contig1050.688.1|Name=mRNA_P-canaliculata_contig1050.688.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1824bp|location=Sequence derived from alignment at P-canaliculata_contig1050:24909..27220+ (Pelvetia canaliculata dioecious)
GTCGGGGACTCCACTATCCCCTGGAATAACCAGTTCCGATTCTTCATGAC
GACGAAACTCAGCAATCCGCACTACCCGCCTGAAGTTTCGGTGAAAGTCA
GTCTTCTTAACTTTGCAATCACCTTCATGGGTCTGGAGGACCAGCTGCTG
GGTGTCGCGGTGGTAGAAGAAATGCCTGAGATGCAGGAGAAGAAAAACGC
CCTGGGTCGGGGACTCCACTATCCCCTGGAATAACCAGTTCCGATTCTTC
ATGACGACGAAACTCAGCAATCCGCACTACCCGCCTGAAGTTTCGGTGAA
AGTCAGTCTTCTTAACTTTGCAATCACCTTCATGGGTCTGGAGGACCAGC
TGCTGGGTGTCGCGGTGGTAGAAGAAATGCCTGAGATGCAGGAGAAGAAA
AACGCCCTGGCCGTTGCAAACGCGAAGATGACAAAGCAACTGCAGGAGAT
AGAAAACCGTATACTGTTCATGCTAAGCAACTCCAAGGGGAACATTCTGG
ACGACCATGAGCTCATCGAAACGCTCGCCTCCTCGAAGAAGACTTCGACA
GAGATCACACTAAAGCCGTTGCAAACGCGAAGATGACAAAGCAACTGCAG
GAGATAGAAAACCGTATACTGTTCATGCTAAGCAACTCCAAGGGGAACAT
TCTGGACGACCATGAGCTCATCGAAACGCTCGCCTCCTCGAAGAAGACTT
CGACAGAGATCACACTAAAGGTGGCGGAGGCTGAGGTGACTGAAAAAGAT
ATCGACGAGAACCGCGAGAGGTACCGCCCAGTGGCCTACAGAGGGGCTAT
CATGTACTTCTGCGTCAGAGACTTCAACGAGGTCGACCCCATGTACCAGT
ACTCGCTACAGTGGTTTACAAACCTCTTCGTGCAGGCAAGACTTGCGAGC
ATAAAGTTATACCAAGTGGCGGAGGCTGAGGTGACTGAAAAAGATATCGA
CGAGAACCGCGAGAGGTACCGCCCAGTGGCCTACAGAGGGGCTATCATGT
ACTTCTGCGTCAGAGACTTCAACGAGGTCGACCCCATGTACCAGTACTCG
CTACAGTGGTTTACAAACCTCTTCGTGCAGGCAAGACTTGCGAGCATAAA
GTTATACCAAGGCATTCACCTCAGTGAGAAAAGCGATGTTCTGGAAGAAC
GACTGGAGGAACTCAACAATTTTTTCACCTACTATGTATACACGAACGTG
TGCAGAAGTTTCTTCGAAAAGGACAAGTTGTTGTTTTCCTTCCTCATCAC
CATTAGAATTCTTCAGGGCATTCACCTCAGTGAGAAAAGCGATGTTCTGG
AAGAACGACTGGAGGAACTCAACAATTTTTTCACCTACTATGTATACACG
AACGTGTGCAGAAGTTTCTTCGAAAAGGACAAGTTGTTGTTTTCCTTCCT
CATCACCATTAGAATTCTTCAGGCGGACAAACTTATCGACGGAAACGAAT
GGTCATTCCTCATTTCGGGCAAGACGCTTACGCCTGTCCAGGCCGGCGAA
AATCCAGCTTCAGACTGGATCGATGACCGGATGTGGAACGAAGTGCAAGC
ACTGTCGGGGCTTCCCGCTTTCGAAGGCCTTGCCGAGAGCCTTATGAACC
GGCTCCTGCAAGACTTCAAGGCGGCGGACAAACTTATCGACGGAAACGAA
TGGTCATTCCTCATTTCGGGCAAGACGCTTACGCCTGTCCAGGCCGGCGA
AAATCCAGCTTCAGACTGGATCGATGACCGGATGTGGAACGAAGTGCAAG
CACTGTCGGGGCTTCCCGCTTTCGAAGGCCTTGCCGAGAGCCTTATGAAC
CGGCTCCTGCAAGACTTCAAGGCG
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