mRNA_P-canaliculata_contig102382.378.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A420WI64_9PROT (DNA-directed RNA polymerase subunit beta n=3 Tax=Robiginitomaculaceae TaxID=2800062 RepID=A0A420WI64_9PROT) HSP 1 Score: 596 bits (1537), Expect = 1.620e-200 Identity = 289/330 (87.58%), Postives = 310/330 (93.94%), Query Frame = 1
Query: 4 KTLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
KTLM KNAVSGPRGFKKGPVTEE LNDIPRSDWWRIGVDDE+AIGELEALKEQYD+SK RLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINP+EDMP+L+ G AVDIVLNPLGVPSRMNVGQILETHLGWAC+G+GK+ID+ALE YK D + LR +QH YG+GE +P KN++I+ELAGN+T+G+PIATPVFDGAREPDIV MLE+AGLHSSGQ+ L DGRTGEKFTR VTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 988 KTLMGKNAVSGPRGFKKGPVTEETLNDIPRSDWWRIGVDDEKAIGELEALKEQYDSSKARLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPIEDMPFLDDGTAVDIVLNPLGVPSRMNVGQILETHLGWACSGVGKMIDNALEQYKADGKIEDLRGTLQHAYGEGEEIPEKNEDILELAGNLTKGVPIATPVFDGAREPDIVKMLEKAGLHSSGQVSLYDGRTGEKFTRQVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1317
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A8J3G0I5_9PROT (DNA-directed RNA polymerase subunit beta n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G0I5_9PROT) HSP 1 Score: 595 bits (1534), Expect = 4.430e-200 Identity = 287/328 (87.50%), Postives = 311/328 (94.82%), Query Frame = 1
Query: 10 LMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
LM K+AVSGPRGFKKGP+T+E L+++PRSDWWRIG+DDE+AIGELEALK QYDTSK RLDARF+DKVDKLQRGD+LPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINP+EDMP+L GQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIG +I++ALE YK D ++ ALREAVQHGYGD LPRKNDE+IELAGNV RG+PIATPVFDGAREPDIVTMLE+AGLHSSGQ+ L+DGRTG++FTR VTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 989 LMGKSAVSGPRGFKKGPITDETLDEVPRSDWWRIGLDDEKAIGELEALKSQYDTSKARLDARFDDKVDKLQRGDDLPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPIEDMPFLPNGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGDMINEALEVYKEDGNVTALREAVQHGYGDDITLPRKNDELIELAGNVIRGVPIATPVFDGAREPDIVTMLEKAGLHSSGQVTLHDGRTGDQFTRQVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1316
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A848V268_9PROT (DNA-directed RNA polymerase subunit beta n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V268_9PROT) HSP 1 Score: 584 bits (1505), Expect = 8.880e-196 Identity = 282/331 (85.20%), Postives = 308/331 (93.05%), Query Frame = 1
Query: 1 KKTLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
+KTL+ K AVSGPRGFKKGP+TEENL+DIPRSDWWRIG++DE+AIGELEALKEQYDTSK RLDARF+DKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINP+EDMP+L TGQ VDIVLNPLGVPSRMNVGQILETHLGWAC+G+GKLIDDAL+TYK + MA ++EA+ YG+G +PRKNDE++ELAGN+T G+PIATPVFDGAREPDIV L+ AGL SGQ+ L DGRTGE+F RPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 985 RKTLIGKTAVSGPRGFKKGPITEENLDDIPRSDWWRIGINDEKAIGELEALKEQYDTSKARLDARFDDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPIEDMPFLATGQGVDIVLNPLGVPSRMNVGQILETHLGWACSGVGKLIDDALKTYKAEGSMAPVKEALTIAYGEGAEMPRKNDELLELAGNLTNGVPIATPVFDGAREPDIVETLKSAGLTESGQVDLYDGRTGERFIRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1315
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: UPI0003750290 (DNA-directed RNA polymerase subunit beta n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0003750290) HSP 1 Score: 571 bits (1471), Expect = 9.740e-191 Identity = 283/328 (86.28%), Postives = 301/328 (91.77%), Query Frame = 1
Query: 10 LMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
LM+KNAVSGPRGFKKGPVT ENL DIPRSDWWRIGVDDE+AIGE+EALKEQYDTSK RLDARFEDKVDKLQRGDELPPGVMK VKVFVAVKRKLQPGDKMAGRHGNKGVISKINP+EDMPYL+ G VD+VLNPLGVPSRMNVGQILETHLGWACAGIGK+ID+AL+TY + M L+ A+ + Y GE LPRKN E+IELAGN+ RG+PIATPVFDGA E DIV MLE+AGL SSGQ+ LNDGRTGE FTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 988 LMNKNAVSGPRGFKKGPVTLENLTDIPRSDWWRIGVDDEKAIGEMEALKEQYDTSKARLDARFEDKVDKLQRGDELPPGVMKSVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPIEDMPYLDDGTPVDLVLNPLGVPSRMNVGQILETHLGWACAGIGKMIDEALQTYHAEGSMEPLKLALNNAYEGGE-LPRKNSELIELAGNLKRGMPIATPVFDGADETDIVHMLEKAGLTSSGQVRLNDGRTGEPFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1314
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A2G2GE41_9PROT (DNA-directed RNA polymerase subunit beta n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GE41_9PROT) HSP 1 Score: 563 bits (1450), Expect = 1.270e-187 Identity = 280/331 (84.59%), Postives = 301/331 (90.94%), Query Frame = 1
Query: 1 KKTLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
K TL+ K AVSGPRGF KGPVTEE L +IPRSDWWRIGVDDE+AIGELEALK QYDTSK LDARFEDKVDKLQRGDEL PGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYL GQAVDIVLNPLGVPSRMN+GQILETHLGWACAG+GKLIDDAL+ Y++ DMA L+ ++++ Y +G LP K++E+IELAGNVT G+PIATPVFDGA E DIV ML +AGL SSGQ +L DGRTGE+FTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 985 KLTLLGKKAVSGPRGFSKGPVTEETLGEIPRSDWWRIGVDDEKAIGELEALKTQYDTSKATLDARFEDKVDKLQRGDELAPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLSNGQAVDIVLNPLGVPSRMNIGQILETHLGWACAGMGKLIDDALKNYRLSGDMAPLKLSLENAY-EGIDLPSKDEELIELAGNVTGGVPIATPVFDGAHEEDIVEMLLKAGLTSSGQEMLTDGRTGEQFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1314
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A520XUS5_9ACTN (DNA-directed RNA polymerase subunit beta n=2 Tax=Bacteria TaxID=2 RepID=A0A520XUS5_9ACTN) HSP 1 Score: 561 bits (1447), Expect = 3.540e-187 Identity = 278/330 (84.24%), Postives = 297/330 (90.00%), Query Frame = 1
Query: 4 KTLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
K L+ K AVSGPRG+KKGPVTEENL+++PRSDWWRIGVDDE+ IGELEALK QYDTSK +LDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINP+EDMPYL G AVDIVLNPLGVPSRMNVGQILETHLGWACAG GK+IDDALE Y+ DM L+ ++ Y +G LP+KNDE+ ELAGN+ G+PIATPVFDGA E DIV MLE+AGL SSGQ L DGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 986 KILLGKKAVSGPRGYKKGPVTEENLSEVPRSDWWRIGVDDEKTIGELEALKTQYDTSKAKLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPIEDMPYLSDGTAVDIVLNPLGVPSRMNVGQILETHLGWACAGTGKMIDDALEAYRASGDMKPLKMQLESTY-EGIDLPKKNDELTELAGNLKAGVPIATPVFDGAHEGDIVEMLEKAGLTSSGQERLVDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1314
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A2G2MQC3_9PROT (DNA-directed RNA polymerase subunit beta n=4 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MQC3_9PROT) HSP 1 Score: 554 bits (1427), Expect = 3.340e-184 Identity = 273/329 (82.98%), Postives = 292/329 (88.75%), Query Frame = 1
Query: 7 TLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
TLM K AVSGPRGF+KGPV+EE L++IPRSDWWRIGV DE+AI ELEAL+ QYDTSK +LDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYL G VDIVLNPLGVPSRMNVGQILETH+GWACAG GK+ID+AL+ YK DM LR ++ Y D LP+KN E+ ELAGN+ +G+PIATPVFDGA E DIV MLER GL SSGQ L DGRTGE+FTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 987 TLMGKKAVSGPRGFRKGPVSEETLDEIPRSDWWRIGVADEKAISELEALRVQYDTSKAKLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLADGTPVDIVLNPLGVPSRMNVGQILETHMGWACAGAGKMIDEALKAYKRSGDMTPLRLTLEDTYKDASELPKKNSELEELAGNLVKGVPIATPVFDGAHEEDIVEMLERVGLTSSGQEYLRDGRTGEQFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1315
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A3C2E9U3_9PROT (DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C2E9U3_9PROT) HSP 1 Score: 513 bits (1321), Expect = 4.970e-174 Identity = 248/331 (74.92%), Postives = 285/331 (86.10%), Query Frame = 1
Query: 1 KKTLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
K ++ K+A SGPRGFKKG ++ E L+D+P+S WW+IG+DDE+ + E+EALK+QYD SK RLD RFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKI PVEDMP+LE G VD+VLNPLGVPSRMNVGQILETHLGWAC G+GK I A E Y+ D ++ L+ A+++ YG E +P +DE+ EL+ N+ G+PIATPVFDGAREPDIV LE AGL SSGQ+VL+DG+TG++F R VTVG ++LKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 459 KDLMIGKDATSGPRGFKKGKISAETLDDVPQSQWWKIGLDDEKVMAEVEALKKQYDDSKARLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKIAPVEDMPFLEDGTPVDVVLNPLGVPSRMNVGQILETHLGWACVGLGKQIGQAYEAYERDGNIKPLKAALENAYGQNEEMPETDDELAELSRNLMPGVPIATPVFDGAREPDIVAHLEAAGLDSSGQVVLHDGQTGDQFRRKVTVGIMHILKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 789
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A2U2BRC8_9PROT (DNA-directed RNA polymerase subunit beta n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BRC8_9PROT) HSP 1 Score: 520 bits (1338), Expect = 4.820e-171 Identity = 250/328 (76.22%), Postives = 285/328 (86.89%), Query Frame = 1
Query: 10 LMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKVDNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
L+ K AVSGP+GFKKG V+EE+L D PRS WW+IG+DDEQA+ E+EALK+QYD SK RLD+RFEDKV+KLQRGDE+PPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKI P+EDMP+ + G VD+VLNPLGVPSRMNVGQILETHLGWAC G+G+ I +A E YK D + AL+ ++ YGD + LP +E+ ELA N++ G+PIATPVFDGAREPD+V ML+RAGL SGQ+ L DG+TG+ F RPVTVG K+LLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 988 LVGKKAVSGPKGFKKGQVSEESLADAPRSQWWKIGLDDEQAMAEVEALKKQYDESKARLDSRFEDKVEKLQRGDEMPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKIAPIEDMPFTDDGTPVDVVLNPLGVPSRMNVGQILETHLGWACKGLGRQIGEAYEAYKRDGKVKALKGVIEEAYGDKQELPSSGEEVSELARNLSNGVPIATPVFDGAREPDVVEMLKRAGLDESGQVTLYDGQTGDAFRRPVTVGIKHLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 1315
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Match: A0A7C2T5F3_9PROT (DNA-directed RNA polymerase subunit beta n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7C2T5F3_9PROT) HSP 1 Score: 499 bits (1286), Expect = 7.750e-169 Identity = 248/336 (73.81%), Postives = 281/336 (83.63%), Query Frame = 1
Query: 1 KKTLMSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQYDTSKGRLDARFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKINPVEDMPYLETGQAVDIVLNPLGVPSRMNVGQILETHLGWACAGIGKLIDDALETYKV-----DNDMAALREAVQHGYGDGEVLPRKNDEIIELAGNVTRGIPIATPVFDGAREPDIVTMLERAGLHSSGQMVLNDGRTGEKFTRPVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 993
K L+ K AVS P+G KG + EE L ++ + WW+IG+ DE A+ E+EALK+QYD S+ RL+ARF DKVDKL+RGDELPPGVMK VKVFVAVKRKLQPGDKMAGRHGNKGVISKI P+EDMP+L G +VDIVLNPLGVPSRMNVGQILETHLGWAC G+GK I D LE ++ D+ A ++E YG+ ++LPR NDE+ ELAGN+TRG+PI+TPVFDG REPDIV ML++AGL SGQ+ L DGRTGEKF R VTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
Sbjct: 466 KSLLVGKEAVSAPKGLDKGKINEEGLGELSKGQWWKIGLKDESAMAEVEALKKQYDESRQRLEARFNDKVDKLKRGDELPPGVMKTVKVFVAVKRKLQPGDKMAGRHGNKGVISKIAPIEDMPFLADGTSVDIVLNPLGVPSRMNVGQILETHLGWACRGLGKQIGDVLEQWEAGKSSRDDVGAKIKEI----YGEDQILPRSNDELKELAGNLTRGVPISTPVFDGVREPDIVKMLKKAGLEESGQVDLYDGRTGEKFGRKVTVGYKYLLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV 797 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102382.378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102382.378.1 >prot_P-canaliculata_contig102382.378.1 ID=prot_P-canaliculata_contig102382.378.1|Name=mRNA_P-canaliculata_contig102382.378.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=327bp MSKNAVSGPRGFKKGPVTEENLNDIPRSDWWRIGVDDEQAIGELEALKEQback to top mRNA from alignment at P-canaliculata_contig102382:2..994- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig102382.378.1 ID=mRNA_P-canaliculata_contig102382.378.1|Name=mRNA_P-canaliculata_contig102382.378.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=993bp|location=Sequence derived from alignment at P-canaliculata_contig102382:2..994- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102382:2..994- >mRNA_P-canaliculata_contig102382.378.1 ID=mRNA_P-canaliculata_contig102382.378.1|Name=mRNA_P-canaliculata_contig102382.378.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1962bp|location=Sequence derived from alignment at P-canaliculata_contig102382:2..994- (Pelvetia canaliculata dioecious)back to top |