Homology
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
A0A6A6PLG2_9PEZI (Putative 60S ribosomal protein L38 n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PLG2_9PEZI)
HSP 1 Score: 108 bits (271), Expect = 2.550e-29
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
MPREI DIKTFIEICRRKDA S R+KK+K G TTQTKFKVRC RYLYTLVLKD+DKA+KL+QSLPP
Sbjct: 1 MPREIQDIKTFIEICRRKDASSTRVKKNKIGNTTQTKFKVRCKRYLYTLVLKDSDKADKLRQSLPP 66
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
UPI000CE262DF (60S ribosomal protein L38-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE262DF)
HSP 1 Score: 108 bits (269), Expect = 3.010e-28
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1
Query: 43 PHQSSPTMPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
P SP MP++I DIKTFIE+CRRKDA SARIKKS+ AT QTKFKVRC RYLYTLVLKD+DKA+KLKQSLPP
Sbjct: 40 PKSKSPNMPQQISDIKTFIELCRRKDASSARIKKSR--ATGQTKFKVRCQRYLYTLVLKDSDKADKLKQSLPP 110
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
A0A6J3M7K0_9PEZI (ribosomal protein L38e n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3M7K0_9PEZI)
HSP 1 Score: 105 bits (263), Expect = 6.570e-28
Identity = 57/66 (86.36%), Postives = 59/66 (89.39%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
MPREI DIKTFIEICRRKDA SARIKK+K T QTKFKVRC RYLYTLVLKD+DKAEKLKQSLPP
Sbjct: 1 MPREISDIKTFIEICRRKDASSARIKKNK--VTNQTKFKVRCQRYLYTLVLKDSDKAEKLKQSLPP 64
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
M3ATF7_PSEFD (Uncharacterized protein n=2 Tax=Pseudocercospora TaxID=131324 RepID=M3ATF7_PSEFD)
HSP 1 Score: 105 bits (261), Expect = 1.400e-27
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
MP+E+ DIK+FIEICRRKDA SARIKK+K G QTKFKVRC+R+LYTLVLKD+DKAEKLKQSLPP
Sbjct: 1 MPKEVTDIKSFIEICRRKDASSARIKKNKVGNKEQTKFKVRCHRFLYTLVLKDSDKAEKLKQSLPP 66
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
A0A4S2MQ18_9PEZI (Uncharacterized protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2MQ18_9PEZI)
HSP 1 Score: 104 bits (259), Expect = 5.450e-27
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 1
Query: 61 TMPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
TMP+++HDIK FIE+CRRKDA++ARIKKS KG++ Q KFKVRC+R+LYTLVLKD DKAEKLKQSLPP
Sbjct: 33 TMPKQVHDIKQFIELCRRKDAKAARIKKSTKGSS-QVKFKVRCHRHLYTLVLKDTDKAEKLKQSLPP 98
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
M2Y1U8_DOTSN (Uncharacterized protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=M2Y1U8_DOTSN)
HSP 1 Score: 103 bits (256), Expect = 7.650e-27
Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
MP+EI+DIK FIE+CRRKDA SARIKK+K AT QTKFKVRC RYLYTL LKD+DKAEKLKQSLPP
Sbjct: 1 MPKEINDIKAFIEVCRRKDASSARIKKNK--ATNQTKFKVRCQRYLYTLTLKDSDKAEKLKQSLPP 64
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
A0A2T3BAA8_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3BAA8_AMORE)
HSP 1 Score: 102 bits (254), Expect = 1.380e-26
Identity = 56/67 (83.58%), Postives = 59/67 (88.06%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPS 264
MPREI DIK FIEICRRKDA SARIK+SKK TT KFKVRC R+LYTLVLKDA+KAEKLKQSLPPS
Sbjct: 1 MPREISDIKNFIEICRRKDASSARIKRSKK--TTHIKFKVRCQRHLYTLVLKDAEKAEKLKQSLPPS 65
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
A0A5N5D1K0_9PEZI (60S ribosomal protein L38 n=5 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A5N5D1K0_9PEZI)
HSP 1 Score: 102 bits (254), Expect = 1.420e-26
Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
MP E+ DIK FIEICRRKDA SARIKK+KK + QTKFKVRC+RYLYTLVLKD+DKAEKLKQSLPP
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKKNKKNS--QTKFKVRCHRYLYTLVLKDSDKAEKLKQSLPP 64
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
M2LC23_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LC23_BAUPA)
HSP 1 Score: 102 bits (254), Expect = 1.540e-26
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPS 264
MP+E+ DIKTFIEICRRKDA SARIKK++ AT QTKFKVRC RYLYTLVLKD+DKAEKL+QSLPP+
Sbjct: 1 MPQEVSDIKTFIEICRRKDASSARIKKNR--ATHQTKFKVRCKRYLYTLVLKDSDKAEKLRQSLPPN 65
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match:
A0A2G5HEG9_CERBT (60S ribosomal protein L38 n=4 Tax=Cercospora TaxID=29002 RepID=A0A2G5HEG9_CERBT)
HSP 1 Score: 102 bits (253), Expect = 2.320e-26
Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1
Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261
MPRE+ DIK+FIEICRRKDA SARIKK++ QTKFKVRC R+LYTLVLKD DKAEKLKQSLPP
Sbjct: 1 MPREVTDIKSFIEICRRKDASSARIKKNRSAGINQTKFKVRCQRHLYTLVLKDNDKAEKLKQSLPP 66
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.55e-29 / Id = 83.33 Expect = 3.01e-28 / Id = 78.08 Expect = 6.57e-28 / Id = 86.36 Expect = 1.40e-27 / Id = 80.30 Expect = 5.45e-27 / Id = 77.61 Expect = 7.65e-27 / Id = 81.82 Expect = 1.38e-26 / Id = 83.58 Expect = 1.42e-26 / Id = 81.82 Expect = 1.54e-26 / Id = 80.60 Expect = 2.32e-26 / Id = 78.79 Sequence A0A6A6PLG2_9PEZI UPI000CE262DF A0A6J3M7K0_9PEZI M3ATF7_PSEFD A0A4S2MQ18_9PEZI M2Y1U8_DOTSN A0A2T3BAA8_AMORE A0A5N5D1K0_9PEZI M2LC23_BAUPA A0A2G5HEG9_CERBT Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Fungi Seed ortholog score 106.7 Seed ortholog evalue 6.4e-21 Seed eggNOG ortholog 310453.XP_007581434.1 Preferred name RPL38 KEGG ko ko:K02923 KEGG Pathway ko03010,map03010 KEGG Module M00177 GOs GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 EggNOG free text desc. Belongs to the eukaryotic ribosomal protein eL38 family EggNOG OGs 202UX@147541,3A8NK@33154,3P6UD@4751,3QXEW@4890,KOG3499@1,KOG3499@2759 COG Functional cat. J Best tax level Dothideomycetes Best eggNOG OG NA|NA|NA BRITE br01610,ko00000,ko00001,ko00002,ko03011 Hectar predicted targeting category other localisation Exons 2 Model size 298 Cds size 297 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815595.7486935-CDS-P-canaliculata_contig10221:4657..4784 1622815595.7486935-CDS-P-canaliculata_contig10221:4657..4784 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10221 4658..4784 + 1693494156.7631044-CDS-P-canaliculata_contig10221:4657..4784 1693494156.7631044-CDS-P-canaliculata_contig10221:4657..4784 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10221 4658..4784 + 1622815595.7643404-CDS-P-canaliculata_contig10221:4855..5025 1622815595.7643404-CDS-P-canaliculata_contig10221:4855..5025 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10221 4856..5025 + 1693494156.7742522-CDS-P-canaliculata_contig10221:4855..5025 1693494156.7742522-CDS-P-canaliculata_contig10221:4855..5025 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10221 4856..5025 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10221.350.1
>prot_P-canaliculata_contig10221.350.1 ID=prot_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=99bp
GHNTSTRTTYRRQTPHQSSPTMPREIHDIKTFIEICRRKDARSARIKKSK back to top mRNA from alignment at P-canaliculata_contig10221:4658..5025+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10221.350.1 ID=mRNA_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=368bp|location=Sequence derived from alignment at P-canaliculata_contig10221:4658..5025+ (Pelvetia canaliculata dioecious)GGCCACAACACTTCGACCCGGACTACCTACCGCAGACAGACCCCCCACCA
ATCGTCGCCCACCATGCCTCGCGAGATTCACGACATCAAGACGTTCATTG
AGATCTGTCGGCGCAAGGACGCCCGCT GTACGTGTCGGCGACTGGCAGAC
CCGCGCGCGAGGAACTCTCCGCTGATGGTGTGTGGTGGTGGTTCGCAGCG
GCGCGGATAAAGAAGAGCAAGAAGGGCGCGACGACGCAGACCAAGTTCAA
GGTCCGGTGCTATCGGTACCTCTACACGTTGGTCTTGAAGGACGCCGACA
AGGCCGAAAAGCTCAAACAAAGCCTTCCGCCGAGTGAGCCAAGCCCAAGG
TCCCAAAGGCTTCCAGGA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10221:4658..5025+
>mRNA_P-canaliculata_contig10221.350.1 ID=mRNA_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at P-canaliculata_contig10221:4658..5025+ (Pelvetia canaliculata dioecious) back to top