mRNA_P-canaliculata_contig10217.343.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10217.343.1
Unique NamemRNA_P-canaliculata_contig10217.343.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 1.620e-132
Identity = 192/238 (80.67%), Postives = 200/238 (84.03%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMELRSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADYFR 714
            FP IRLLHADPVVFEVE FFTPQECD Y+ MST  +SGRRKGG    EL+S TTSSQ Q  Q  TSTTWFHHYASAPEL+AKAS LLGV DY  WEEPQTVRYRPGERFNWHLDALPP+E GASKGGQRTATVLVYLTNM  N GGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAG PFD R LHAGEVVG+    G  +K KYIAQLWCHKKPYPPSVP GSSHEAAE+ I DY R
Sbjct:  118 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQCQ--QXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQ----GNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYAR 349          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.450e-76
Identity = 131/250 (52.40%), Postives = 158/250 (63.20%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRK-------------GGFKSMELRSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVK-DYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            FP +RLLHA+P V  V DFFT +ECD Y+  S                      G    M+ RS T  +      QRTSTTWFH +++ PEL+AKASAL+GV  +   WEE QTVRYRPGE+F WHLDALPP    AS+GGQR AT+LVYLT M    GGATAFRDLGPLRVRP+KG  L+FFPS GG   CPFD+RTLHAGEVV     +    + K+IAQLW  +  Y P+VP  + HE A   +A++
Sbjct:  101 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQ-RSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVV-----RPGAEQDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEF 344          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 3.850e-74
Identity = 130/253 (51.38%), Postives = 156/253 (61.66%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMEL----------------RSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVK-DYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            FP +RLLHA+P V  V DFFT +ECD Y+  S                                 RS T  +      QRTSTTWFH +++ PEL+AKASAL+GV  +   WEE QTVRYRPGE+F WHLDALPP    ASKGGQR AT+LVYLT M    GGATAFRDLGPLRVRP+KG  L+FFPS GG   CPFD+RTLHAGEVV     +    + K+IAQLW  ++ Y P+VP  + HE A   +A++
Sbjct:  323 FPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVV-----RPGAEQDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEF 570          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.580e-73
Identity = 124/241 (51.45%), Postives = 159/241 (65.98%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMELRSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLGP-----LRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            F   R+LH DP+V  V+DFFT +ECD Y+ MS +  +G + G   ++  RS+T    +  + QRTSTTWFHHY + PEL+AK+S L G+ D  ++EEPQTVRY+P ++F WHLDAL P     SKGGQRTAT+LVYLT++    GGAT FRDLGP     L+V+PKKG  L+FFP+ GG    PFD+RTLHAGEVV            K+IAQLW  +  Y P+VP  + H AA E I+ Y
Sbjct:  202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIAMS-DPTAGNKDGD--AVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVV-----SADCKSDKWIAQLWLREDSYEPTVPPENVHAAATEPISQY 434          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC)

HSP 1 Score: 239 bits (610), Expect = 2.800e-73
Identity = 125/245 (51.02%), Postives = 161/245 (65.71%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRK--GGFKSMEL-RSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPP-TETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLG---PLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADYFR 714
            F   R+LH DP+V  V+DFFT +ECD YV+MS ++++ + +  G  + + L +S T    S+ + QRTSTTWFHHYA  PEL+A+A+ LLG+     +EEPQTVRYR  E+F WHLDAL P     +S  GQR +T+LVYLT++    GGAT FRDLG   PL+VRPKKG  L+FFPS GG   CPFD+RTLH GE VGE A        K+IAQLW  ++ Y P+ P GS H  A   I +Y +
Sbjct:  229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGEDA-----PNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA)

HSP 1 Score: 238 bits (607), Expect = 9.150e-73
Identity = 127/247 (51.42%), Postives = 155/247 (62.75%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTES---QSGRRKGGFKSMELR---SVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            F   R+LH DP+V  V+DFFTP+ECD  +  ST +        K G   + ++   S T    S+ + QRTSTTWFHHYA  PEL+AKA  L+G+ D   +EEPQTVRYR  E F WHLDAL PT   A KGGQR AT+LVYLT++    GGAT FRDLG     PL+VRPKKG  L+FFP+ GG    P DLRTLH GE V   A      + K+IAQLW  + PY P+ P G+SH +A   I+DY
Sbjct:  235 FSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDA-----EQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.300e-72
Identity = 117/241 (48.55%), Postives = 154/241 (63.90%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMEL-RSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIAD 705
            F   R+LH DP++  ++DF TP ECDTY+ +++  +  +       ME+ +S T       + QRTSTTWFHHY     L+AKAS LLG+K    WEEPQTVRYR  E+F WHLDAL P+E     GGQR AT+LVYL ++    GG+T FRDLG     PL+V+PKKG  L+FFP+ GG    PFD+RTLHAGE V +     ++   K+IAQLW  +  Y P+ P G+SHEAA E +++
Sbjct:   57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKN-ANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSD-----ESDDDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.870e-70
Identity = 117/242 (48.35%), Postives = 154/242 (63.64%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMEL-RSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            F   R+LH DP+V  V+DF T  ECDT V + T++    +      M++ +S T       + QRTSTTWFHHY   P+L+AKAS LLG+ +   WEEPQTVRYR  E+F WHLDAL P++  A  GGQR AT++VYL ++   +GG+T FRDLG     PL+V PKKG  LVFFP+ GG    PFD+RTLHAGE V +     ++   K+IAQLW  +  Y P+ P G++H AA + I+ Y
Sbjct:   26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVAL-TDNPKYDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSD-----ESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A448ZM68_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM68_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.710e-69
Identity = 122/252 (48.41%), Postives = 157/252 (62.30%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMS----TESQSGRRKGGFKSMELRSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLGP------------LRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            F  I +LH DP+V  ++DFFT +ECD YV+MS    T+  S +    FK+   RS T       + QRTSTTWFHHY + PEL++KAS L+G+     WEEPQTVRY+  E+F WHLDAL P ++ A KGGQR AT+LVYL   D+ +GGAT FRDL P            L+V+PKKG  L+FFP+ GG  G PFD+RTLH GEVV      G +   K+I+QLW     Y P+ P G+ HE A + + +Y
Sbjct:  221 FEKINVLHLDPLVLSIDDFFTEEECDRYVEMSLAPVTDEGSQKTMDSFKT---RSKTVGKDKNAKSQRTSTTWFHHYKNVPELMSKASRLVGLDTIDRWEEPQTVRYKRNEKFTWHLDALAPDQSTAEKGGQRLATLLVYLK--DLESGGATIFRDLTPATGETDDNASGFLKVQPKKGSALMFFPAAGGIPGAPFDIRTLHCGEVV-----PGASETDKWISQLWLRATXYTPTAPPGNLHEEALDRVKEY 462          
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Match: A0A7S4QXQ4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA)

HSP 1 Score: 225 bits (574), Expect = 3.410e-69
Identity = 117/242 (48.35%), Postives = 154/242 (63.64%), Query Frame = 1
Query:    1 FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMEL-RSVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQTVRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKTSKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADY 708
            F   R+LH DP+V  V+DF T  ECDT V + T++    +      M++ +S T       + QRTSTTWFHHY   P+L+AKAS LLG+ +   WEEPQTVRYR  E+F WHLDAL P++  A  GGQR AT++VYL ++   +GG+T FRDLG     PL+V PKKG  LVFFP+ GG    PFD+RTLHAGE V +     ++   K+IAQLW  +  Y P+ P G++H AA + I+ Y
Sbjct:  123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVAL-TDNPKYDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSD-----ESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10217.343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGF5_9PHAE1.620e-13280.67Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
D7G1H9_ECTSI1.450e-7652.40Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A6H5L0Y5_9PHAE3.850e-7451.38Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2KCF3_9STRA1.580e-7351.45Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K0SVE6_THAOC2.800e-7351.02Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2UAB3_9STRA9.150e-7351.42Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2N1B0_9STRA3.300e-7248.55Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1ZRX7_9STRA1.870e-7048.35Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZM68_9STRA1.710e-6948.41Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S4QXQ4_9STRA3.410e-6948.35Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10217contigP-canaliculata_contig10217:3346..4258 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.9
Seed ortholog evalue1.1e-103
Seed eggNOG ortholog2880.D8LRR7
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size714
Cds size714
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815595.1535785-CDS-P-canaliculata_contig10217:3345..37471622815595.1535785-CDS-P-canaliculata_contig10217:3345..3747Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10217 3346..3747 +
1693494156.403731-CDS-P-canaliculata_contig10217:3345..37471693494156.403731-CDS-P-canaliculata_contig10217:3345..3747Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10217 3346..3747 +
1622815595.1660082-CDS-P-canaliculata_contig10217:3946..42581622815595.1660082-CDS-P-canaliculata_contig10217:3946..4258Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10217 3947..4258 +
1693494156.4130826-CDS-P-canaliculata_contig10217:3946..42581693494156.4130826-CDS-P-canaliculata_contig10217:3946..4258Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10217 3947..4258 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10217.343.1prot_P-canaliculata_contig10217.343.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10217 3346..4258 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10217.343.1

>prot_P-canaliculata_contig10217.343.1 ID=prot_P-canaliculata_contig10217.343.1|Name=mRNA_P-canaliculata_contig10217.343.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=238bp
FPSIRLLHADPVVFEVEDFFTPQECDTYVKMSTESQSGRRKGGFKSMELR
SVTTSSQSQFQQQRTSTTWFHHYASAPELLAKASALLGVKDYRLWEEPQT
VRYRPGERFNWHLDALPPTETGASKGGQRTATVLVYLTNMDVNAGGATAF
RDLGPLRVRPKKGKCLVFFPSFGGEAGCPFDLRTLHAGEVVGEVAGKGKT
SKAKYIAQLWCHKKPYPPSVPVGSSHEAAEECIADYFR
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mRNA from alignment at P-canaliculata_contig10217:3346..4258+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10217.343.1 ID=mRNA_P-canaliculata_contig10217.343.1|Name=mRNA_P-canaliculata_contig10217.343.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=913bp|location=Sequence derived from alignment at P-canaliculata_contig10217:3346..4258+ (Pelvetia canaliculata dioecious)
TTCCCTTCCATCCGTCTCCTACACGCTGACCCTGTGGTGTTCGAAGTGGA GGATTTTTTCACCCCTCAAGAGTGCGACACTTACGTGAAAATGTCCACGG AGTCTCAGTCAGGGCGAAGGAAGGGTGGCTTCAAGTCAATGGAGCTCAGA AGCGTAACAACAAGCTCCCAGTCCCAATTCCAGCAACAACGGACGTCCAC CACCTGGTTTCACCATTATGCATCGGCGCCAGAATTGCTGGCCAAGGCAT CGGCGCTCTTGGGTGTGAAAGACTACCGCCTGTGGGAAGAGCCGCAGACA GTGCGATACCGGCCTGGCGAGAGATTCAACTGGCACTTGGACGCTTTGCC ACCCACCGAGACTGGGGCATCGAAAGGCGGACAGCGCACGGCCACTGTCC TGGTGAGTCTGACTTTAAGGCACGTGGTGTCGGGGCGCGAGTTTATGCTT GTCGAAATCCCCAACAACCCTTTACGCGCGAGCTTCGTTTGCAATAATAT TTACATTTGTCACCTCATAGACCTAATACGATAGGCTATAGGGTCTAAAC GATACATTTGTAAGAGTACGATCTCTTGTCGGGCGACCGCACGCATTTCA GGTTTACCTAACCAACATGGACGTAAACGCTGGTGGCGCAACCGCTTTTC GAGACCTTGGCCCATTGCGTGTTCGCCCCAAGAAGGGAAAGTGCTTGGTG TTTTTTCCATCATTCGGGGGTGAGGCAGGGTGCCCGTTCGACCTCCGAAC TCTGCATGCGGGAGAAGTTGTGGGAGAGGTTGCAGGCAAGGGGAAGACTT CGAAGGCCAAGTATATCGCGCAACTTTGGTGCCACAAGAAGCCTTATCCA CCTTCCGTTCCAGTTGGGTCTTCACACGAGGCAGCTGAGGAGTGCATCGC TGATTATTTCAGG
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Coding sequence (CDS) from alignment at P-canaliculata_contig10217:3346..4258+

>mRNA_P-canaliculata_contig10217.343.1 ID=mRNA_P-canaliculata_contig10217.343.1|Name=mRNA_P-canaliculata_contig10217.343.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at P-canaliculata_contig10217:3346..4258+ (Pelvetia canaliculata dioecious)
TTCCCTTCCATCCGTCTCCTACACGCTGACCCTGTGGTGTTCGAAGTGGA
GGATTTTTTCACCCCTCAAGAGTGCGACACTTACGTGAAAATGTCCACGG
AGTCTCAGTCAGGGCGAAGGAAGGGTGGCTTCAAGTCAATGGAGCTCAGA
AGCGTAACAACAAGCTCCCAGTCCCAATTCCAGCAACAACGGACGTCCAC
CACCTGGTTTCACCATTATGCATCGGCGCCAGAATTGCTGGCCAAGGCAT
CGGCGCTCTTGGGTGTGAAAGACTACCGCCTGTGGGAAGAGCCGCAGACA
GTGCGATACCGGCCTGGCGAGAGATTCAACTGGCACTTGGACGCTTTGCC
ACCCACCGAGACTGGGGCATCGAAAGGCGGACAGCGCACGGCCACTGTCC
TGTTCCCTTCCATCCGTCTCCTACACGCTGACCCTGTGGTGTTCGAAGTG
GAGGATTTTTTCACCCCTCAAGAGTGCGACACTTACGTGAAAATGTCCAC
GGAGTCTCAGTCAGGGCGAAGGAAGGGTGGCTTCAAGTCAATGGAGCTCA
GAAGCGTAACAACAAGCTCCCAGTCCCAATTCCAGCAACAACGGACGTCC
ACCACCTGGTTTCACCATTATGCATCGGCGCCAGAATTGCTGGCCAAGGC
ATCGGCGCTCTTGGGTGTGAAAGACTACCGCCTGTGGGAAGAGCCGCAGA
CAGTGCGATACCGGCCTGGCGAGAGATTCAACTGGCACTTGGACGCTTTG
CCACCCACCGAGACTGGGGCATCGAAAGGCGGACAGCGCACGGCCACTGT
CCTGGTTTACCTAACCAACATGGACGTAAACGCTGGTGGCGCAACCGCTT
TTCGAGACCTTGGCCCATTGCGTGTTCGCCCCAAGAAGGGAAAGTGCTTG
GTGTTTTTTCCATCATTCGGGGGTGAGGCAGGGTGCCCGTTCGACCTCCG
AACTCTGCATGCGGGAGAAGTTGTGGGAGAGGTTGCAGGCAAGGGGAAGA
CTTCGAAGGCCAAGTATATCGCGCAACTTTGGTGCCACAAGAAGCCTTAT
CCACCTTCCGTTCCAGTTGGGTCTTCACACGAGGCAGCTGAGGAGTGCAT
CGCTGATTATTTCAGGGTTTACCTAACCAACATGGACGTAAACGCTGGTG
GCGCAACCGCTTTTCGAGACCTTGGCCCATTGCGTGTTCGCCCCAAGAAG
GGAAAGTGCTTGGTGTTTTTTCCATCATTCGGGGGTGAGGCAGGGTGCCC
GTTCGACCTCCGAACTCTGCATGCGGGAGAAGTTGTGGGAGAGGTTGCAG
GCAAGGGGAAGACTTCGAAGGCCAAGTATATCGCGCAACTTTGGTGCCAC
AAGAAGCCTTATCCACCTTCCGTTCCAGTTGGGTCTTCACACGAGGCAGC
TGAGGAGTGCATCGCTGATTATTTCAGG
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