Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 474 |
| Cds size | 474 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815594.9254308-CDS-P-canaliculata_contig102145:524..998 | 1622815594.9254308-CDS-P-canaliculata_contig102145:524..998 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig102145 525..998 + |
| 1693494156.248103-CDS-P-canaliculata_contig102145:524..998 | 1693494156.248103-CDS-P-canaliculata_contig102145:524..998 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig102145 525..998 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102145.340.1 >prot_P-canaliculata_contig102145.340.1 ID=prot_P-canaliculata_contig102145.340.1|Name=mRNA_P-canaliculata_contig102145.340.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=158bp
NLDNIDAVVRVRNRNGSGTGSIYGETQTTYKVVTNYHVAGRSGSTNTIDI
WNNGQLVRSVQAQVKQHFFTRGTNKDISLLEIPKAALPGEQPVIPMAEYA
SESVKVGDRIWQVGCDAGNWTNAERGIVLAIEDGVVFYLPNSIPGNSGGP
IFSSDCSK back to topmRNA from alignment at P-canaliculata_contig102145:525..998+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig102145.340.1 ID=mRNA_P-canaliculata_contig102145.340.1|Name=mRNA_P-canaliculata_contig102145.340.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=474bp|location=Sequence derived from alignment at P-canaliculata_contig102145:525..998+ (Pelvetia canaliculata dioecious)
AATCTTGACAACATCGATGCAGTGGTCCGAGTGCGAAATCGCAACGGTAG
CGGAACAGGGTCGATTTACGGCGAAACTCAAACCACCTATAAGGTTGTCA
CCAATTATCACGTCGCAGGCAGGTCCGGCAGTACCAACACCATTGATATC
TGGAACAATGGGCAACTCGTGCGGAGTGTTCAAGCCCAAGTAAAGCAGCA
CTTTTTTACTCGAGGTACAAATAAAGACATCTCGCTGCTAGAAATCCCCA
AGGCTGCATTGCCCGGCGAGCAACCCGTGATTCCGATGGCCGAATACGCT
TCTGAATCTGTAAAAGTCGGTGATCGCATCTGGCAGGTAGGATGCGATGC
CGGCAACTGGACCAACGCAGAGCGCGGTATCGTTCTTGCGATCGAAGATG
GTGTTGTTTTCTATTTACCAAATTCAATTCCGGGCAACTCTGGTGGTCCA
ATCTTTTCCAGCGACTGTTCAAAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig102145:525..998+ >mRNA_P-canaliculata_contig102145.340.1 ID=mRNA_P-canaliculata_contig102145.340.1|Name=mRNA_P-canaliculata_contig102145.340.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at P-canaliculata_contig102145:525..998+ (Pelvetia canaliculata dioecious)
AATCTTGACAACATCGATGCAGTGGTCCGAGTGCGAAATCGCAACGGTAG
CGGAACAGGGTCGATTTACGGCGAAACTCAAACCACCTATAAGGTTGTCA
CCAATTATCACGTCGCAGGCAGGTCCGGCAGTACCAACACCATTGATATC
TGGAACAATGGGCAACTCGTGCGGAGTGTTCAAGCCCAAGTAAAGCAGCA
CTTTTTTACTCGAGGTACAAATAAAGACATCTCGCTGCTAGAAATCCCCA
AGGCTGCATTGCCCGGCGAGCAACCCGTGATTCCGATGGCCGAATACGCT
TCTGAATCTGTAAAAGTCGGTGATCGCATCTGGCAGGTAGGATGCGATGC
CGGCAACTGGACCAACGCAGAGCGCGGTATCGTTCTTGCGATCGAAGATG
GTGTTGTTTTCTATTTACCAAATTCAATTCCGGGCAACTCTGGTGGTCCA
ATCTTTTCCAGCGACTGTTCAAAAAATCTTGACAACATCGATGCAGTGGT
CCGAGTGCGAAATCGCAACGGTAGCGGAACAGGGTCGATTTACGGCGAAA
CTCAAACCACCTATAAGGTTGTCACCAATTATCACGTCGCAGGCAGGTCC
GGCAGTACCAACACCATTGATATCTGGAACAATGGGCAACTCGTGCGGAG
TGTTCAAGCCCAAGTAAAGCAGCACTTTTTTACTCGAGGTACAAATAAAG
ACATCTCGCTGCTAGAAATCCCCAAGGCTGCATTGCCCGGCGAGCAACCC
GTGATTCCGATGGCCGAATACGCTTCTGAATCTGTAAAAGTCGGTGATCG
CATCTGGCAGGTAGGATGCGATGCCGGCAACTGGACCAACGCAGAGCGCG
GTATCGTTCTTGCGATCGAAGATGGTGTTGTTTTCTATTTACCAAATTCA
ATTCCGGGCAACTCTGGTGGTCCAATCTTTTCCAGCGACTGTTCAAAA back to top
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