Homology
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A6H5L1H4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1H4_9PHAE)
HSP 1 Score: 229 bits (585), Expect = 1.100e-65
Identity = 107/179 (59.78%), Postives = 139/179 (77.65%), Query Frame = 2
Query: 389 SDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIILSRKFVLEQVASGTPIWLLCIYAVSGLVVMTTAISLILVATKRPKQD 925
SD++ +T+EN+ ETIK+GTWFVKFYTDWC HC++LQPTWEELA +LKGKV VGQVNC+ D +LC RFHV GYPTLVHVHNR+ RVYK KSR K AL+ FA GY K A+SALKSPFGP+E+ KA + + ++KFV+ + GTP+W++C+ AV+ L ++ +LV+ KRPK+D
Sbjct: 75 SDIITVTSENFKETIKEGTWFVKFYTDWCPHCQRLQPTWEELATELKGKVNVGQVNCDRDYSLCRRFHVTGYPTLVHVHNRRSRVYK-KSRGKEALVAFALNGYKKQVAVSALKSPFGPLENFKALIAREALRAKKFVVSTIEKGTPMWMVCLCAVAVLXXXXXVVASVLVSIKRPKED 252
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A5J4XL76_9CHLO (Disulfide isomerase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XL76_9CHLO)
HSP 1 Score: 100 bits (250), Expect = 6.490e-21
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 2
Query: 380 TADSDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARL 769
T +V +T N+ ++ +G W ++F+ WCSHC+ L+ TW+ LA +LKGKV V +V+ ++R L RFHV+G+PT+ HVH+ + R Y K R L+ FA + A+ KSP I V R+
Sbjct: 25 TESQNVRSLTDANFDQSTAEGAWLIEFFAPWCSHCRDLEATWDALADELKGKVNVAKVDGTSERGLLGRFHVEGFPTIFHVHDTETRPYTGK-RTMQKLMDFALADWKAEPALPVWKSPTSLIGRVWGRI 153
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A397TX59_9GLOM (Thioredoxin-like protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397TX59_9GLOM)
HSP 1 Score: 102 bits (255), Expect = 4.270e-19
Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 2
Query: 395 VVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTL 613
V+ + +EN+ E K G WFVKF+ WC HCK L PTWEEL++ L+ KV VG+V+C T++ +CS+F+++GYPTL
Sbjct: 161 VISLNSENFDELTKYGPWFVKFFAPWCGHCKNLAPTWEELSRKLQNKVNVGEVDCTTEKDICSKFNIQGYPTL 233
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A0G4FAB9_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAB9_VITBC)
HSP 1 Score: 95.5 bits (236), Expect = 1.600e-18
Identity = 63/177 (35.59%), Postives = 102/177 (57.63%), Query Frame = 2
Query: 440 GTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLK-SRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIILSRKFVLEQ-VASGTPIWLLCIYAVSGLVVMTTAISLILVATKRPKQD*RSRALAKVLPED 964
G WF++FY +WC HC++LQPTWEELA +LKG+V V +V+C+ + + SRF+++G+PTL+ + R+ R+Y+ K +R +AL FA GY K+ + P ++ +K + + +S +F E V G AV V++ T SL+++ R R R +V PE+
Sbjct: 51 GDWFIEFYANWCGHCQRLQPTWEELAANLKGRVVVAKVDCDANTSTRSRFNIQGFPTLLLL--RQGRMYEYKGARDLAALEAFATGGYKKTPG-KPVPPPESLLDQLKKEAMLLLDMSMRFAKEHPVHVGV--------AVGVSVMLGTVFSLLMMVLTR-----RKRTGGEVAPEE 211
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
J4CD11_THEOR (Transmembrane protein 17 n=3 Tax=Theileria orientalis TaxID=68886 RepID=J4CD11_THEOR)
HSP 1 Score: 92.4 bits (228), Expect = 1.990e-17
Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 2
Query: 371 DFETADSDVVQITTENYTETIKQ-------GTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAI 718
D E +S+ + TE+ E + Q GTWFVKFY WCSHC+++ P WE LAK+LKG+V V V+ + L RF +KGYPTLV H K Y+ R L FA ++K+ A+
Sbjct: 21 DLERENSNHLVTLTESTFEKLTQASSGSTTGTWFVKFYAPWCSHCRRMAPAWESLAKELKGQVNVADVDVTRNPKLGRRFQIKGYPTLVLFHKGKMYHYEGGERTVEKLSQFALGEFSKTDAL 143
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
C1E147_MICCC (Thioredoxin domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E147_MICCC)
HSP 1 Score: 92.8 bits (229), Expect = 2.000e-17
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 2
Query: 395 VVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSP 736
VV++T ++ + +G V Y DWC HC+QL P WEELAK+L+G+V V +VN R+L R HVK YP+++++ + + R Y R AL FA KG+ ++ + +P
Sbjct: 24 VVEVTEVDFDAQVAKGPTLVDVYADWCGHCRQLAPVWEELAKELEGEVYVVKVNGPKCRSLQQRLHVKAYPSILYLRDGEMRSYDAAQRTVQALAAFARKGWRRTKPVPFYMAP 137
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
Q16961_ACACA (Disulfide-like protein n=2 Tax=Acanthamoeba castellanii TaxID=5755 RepID=Q16961_ACACA)
HSP 1 Score: 95.9 bits (237), Expect = 3.000e-17
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 2
Query: 404 ITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTL 613
+T EN+T G WFVKFY WC HCK L PTWE+ A +LKGKV + +V+C TD +C F V+GYPTL
Sbjct: 167 LTAENFTLATNGGKWFVKFYAPWCGHCKNLAPTWEKAASELKGKVNIAKVDCTTDGFMCQLFGVRGYPTL 236
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A0L0DS11_THETB (Protein disulfide isomerase A n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DS11_THETB)
HSP 1 Score: 95.1 bits (235), Expect = 7.010e-17
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 2
Query: 356 DKASEDFETADSDVVQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEK 694
D+ +D DSDVV + +N+ + G+W VKFY WC HCK + P W+E A L G +G+V+C ++CSR+ V+GYPTL + + R Y+ R+ AL+ +AE+
Sbjct: 32 DEFDDDLTEVDSDVVILGDDNFDARVMDGSWLVKFYAPWCGHCKAIAPVWKETASHLLGVTSMGKVDCTVHSSICSRYGVRGYPTLKYFKDGVPRDYR-GGRSVEALVAYAER 143
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A7S2S4S3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4S3_9STRA)
HSP 1 Score: 90.5 bits (223), Expect = 9.180e-17
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 2
Query: 392 DVVQITTENYTETIKQGT-WFVKFYTDWCSHCKQLQPTWEELAKDL-------KGKVRVGQVNCETDRALCSRFHVKGYPTLVHVHNRKCRVYKLKSRAKSALIYFAEKGYTKSAAISALKSPFGPIESVKARLVEAIILSRKFVLEQVASGTP-IWLLCIYAVSGLVVMTTAISLI-LVATKRPKQD 925
+VV + ++ +I+ G W ++FY WC HC + PT+E +AK L + KV V +V+ DRAL SRF+V+G+PT + R Y K R + AL FA K Y + I L SPFGP+ +A L+ + + V G P I+ A G+V TAI +I + +PK+D
Sbjct: 32 EVVDLDARSFDSSIRDGNAWLIEFYAPWCGHCTRFAPTYEAVAKQLHENQSTSERKVMVAKVDGGGDRALASRFNVRGFPTFYLIDGWTVREYTGK-RTQDALFQFATKTYEEYEPIPFLNSPFGPMGQSRALLMRVGTKTIDYHASMVKRGYPSIFAAITLAAFGIVFGLTAILVIGFMTLPKPKED 218
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Match:
A0A4V1IW28_9FUNG (Thioredoxin domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IW28_9FUNG)
HSP 1 Score: 95.5 bits (236), Expect = 1.040e-16
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 2
Query: 398 VQITTENYTETIKQGTWFVKFYTDWCSHCKQLQPTWEELAKDLKGKVRVGQVNCETDRALCSRFHVKGYPTL 613
++++ ++ I G WF+KFY WC HC+ L P W++L+ LKG+V VG VNC+ ++ LCSRF V+GYPTL
Sbjct: 138 IELSISSFDAMISHGPWFIKFYAPWCGHCQHLAPVWDQLSLKLKGQVNVGSVNCDVEKGLCSRFEVRGYPTL 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10195.285.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.10e-65 / Id = 59.78 Expect = 6.49e-21 / Id = 38.46 Expect = 4.27e-19 / Id = 53.42 Expect = 1.60e-18 / Id = 35.59 Expect = 1.99e-17 / Id = 41.46 Expect = 2.00e-17 / Id = 38.60 Expect = 3.00e-17 / Id = 55.71 Expect = 7.01e-17 / Id = 38.94 Expect = 9.18e-17 / Id = 34.57 Expect = 1.04e-16 / Id = 48.61 Sequence A0A6H5L1H4_9PHAE A0A5J4XL76_9CHLO A0A397TX59_9GLOM A0A0G4FAB9_VITBC J4CD11_THEOR C1E147_MICCC Q16961_ACACA A0A0L0DS11_THETB A0A7S2S4S3_9STRA A0A4V1IW28_9FUNG Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 228.4 Seed ortholog evalue 3.6e-57 Seed eggNOG ortholog 2880.D8LKF4 KEGG ko ko:K13984 KEGG Pathway ko04141,map04141 GOs GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005793,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0006810,GO:0006897,GO:0006909,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010033,GO:0012505,GO:0015036,GO:0015037,GO:0016020,GO:0016192,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0023052,GO:0030968,GO:0031974,GO:0031984,GO:0032991,GO:0033554,GO:0034620,GO:0034663,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036498,GO:0042175,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043277,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055114,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:0098657,GO:0098827,GO:0140096,GO:1901564 EggNOG free text desc. cell redox homeostasis EggNOG OGs COG0526@1,KOG0191@2759 Ec32 ortholog description Thioredoxin-like fold Ec32 ortholog Ec-16_002760.1 COG Functional cat. CO Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03110,ko04131 Hectar predicted targeting category signal peptide Exons 6 Model size 2628 Cds size 735 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815591.6139674-UTR-P-canaliculata_contig10195:5159..5352 1622815591.6139674-UTR-P-canaliculata_contig10195:5159..5352 Pelvetia canaliculata dioecious UTR P-canaliculata_contig10195 5160..5352 + 1693494154.606107-UTR-P-canaliculata_contig10195:5159..5352 1693494154.606107-UTR-P-canaliculata_contig10195:5159..5352 Pelvetia canaliculata dioecious UTR P-canaliculata_contig10195 5160..5352 + 1622815591.706635-UTR-P-canaliculata_contig10195:9683..11383 1622815591.706635-UTR-P-canaliculata_contig10195:9683..11383 Pelvetia canaliculata dioecious UTR P-canaliculata_contig10195 9684..11383 + 1693494154.6800737-UTR-P-canaliculata_contig10195:9683..11383 1693494154.6800737-UTR-P-canaliculata_contig10195:9683..11383 Pelvetia canaliculata dioecious UTR P-canaliculata_contig10195 9684..11383 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815591.6253316-CDS-P-canaliculata_contig10195:5352..5589 1622815591.6253316-CDS-P-canaliculata_contig10195:5352..5589 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 5353..5589 + 1693494154.6160378-CDS-P-canaliculata_contig10195:5352..5589 1693494154.6160378-CDS-P-canaliculata_contig10195:5352..5589 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 5353..5589 + 1622815591.6373298-CDS-P-canaliculata_contig10195:7196..7240 1622815591.6373298-CDS-P-canaliculata_contig10195:7196..7240 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 7197..7240 + 1693494154.6242616-CDS-P-canaliculata_contig10195:7196..7240 1693494154.6242616-CDS-P-canaliculata_contig10195:7196..7240 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 7197..7240 + 1622815591.6506238-CDS-P-canaliculata_contig10195:8091..8152 1622815591.6506238-CDS-P-canaliculata_contig10195:8091..8152 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 8092..8152 + 1693494154.6331408-CDS-P-canaliculata_contig10195:8091..8152 1693494154.6331408-CDS-P-canaliculata_contig10195:8091..8152 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 8092..8152 + 1622815591.6645424-CDS-P-canaliculata_contig10195:8437..8551 1622815591.6645424-CDS-P-canaliculata_contig10195:8437..8551 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 8438..8551 + 1693494154.6434314-CDS-P-canaliculata_contig10195:8437..8551 1693494154.6434314-CDS-P-canaliculata_contig10195:8437..8551 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 8438..8551 + 1622815591.6803837-CDS-P-canaliculata_contig10195:8923..9105 1622815591.6803837-CDS-P-canaliculata_contig10195:8923..9105 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 8924..9105 + 1693494154.6586263-CDS-P-canaliculata_contig10195:8923..9105 1693494154.6586263-CDS-P-canaliculata_contig10195:8923..9105 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 8924..9105 + 1622815591.6932077-CDS-P-canaliculata_contig10195:9586..9683 1622815591.6932077-CDS-P-canaliculata_contig10195:9586..9683 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 9587..9683 + 1693494154.6681054-CDS-P-canaliculata_contig10195:9586..9683 1693494154.6681054-CDS-P-canaliculata_contig10195:9586..9683 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10195 9587..9683 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10195.285.1
>prot_P-canaliculata_contig10195.285.1 ID=prot_P-canaliculata_contig10195.285.1|Name=mRNA_P-canaliculata_contig10195.285.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=245bp
MSVIVFPRLRSRSPYCAGKLLLGALLLLFTVAACLGAAVVGSGGGVKGIV back to top mRNA from alignment at P-canaliculata_contig10195:5160..11383+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10195.285.1 ID=mRNA_P-canaliculata_contig10195.285.1|Name=mRNA_P-canaliculata_contig10195.285.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=6224bp|location=Sequence derived from alignment at P-canaliculata_contig10195:5160..11383+ (Pelvetia canaliculata dioecious)ACAGTGTTTGTGCTGATCTACAAAGAGTTCCATCTCGATCAAAAAGCGTT
CCAAAAACGGGGCGTATTCATTGGTCTGGTATCCAGTAGATTGCTACAGT
ACCTTCGCGGAATCGAGGTAAGAGACGTTTTTACCGCACGGTCGCTCGAG
AAAGTAATCTCCCCAAGACTTCAGGGTGTTCGTGAATTCTACT ATGAGTG
TAATCGTATTTCCGCGATTAAGAAGCCGCAGCCCTTATTGTGCAGGGAAG
CTCTTGCTCGGCGCACTCCTCCTGTTGTTCACAGTCGCTGCTTGCCTGGG
CGCGGCCGTGGTCGGAAGCGGTGGAGGCGTAAAGGGAATAGTACAGCGCA
AGGGCGACAAGGCATCGGAAGATTTCGAGACTGCAGACAGCGATGTCGTC
CAGATTACCACGGAAAATTATACCGAGACT GTGAGAACTTCTGGCTCGTC
CTCTACCTACCTTACTGCTGAACATAAGTTTGTTCTGCTAACCCATTACA
TTTTCGCCTGCAGCCAATGCCCTAACCCGATCCCAAACCCAATACTATTA
AATAGTACATACTAATCATAACATTACTGAGTCATATCCAGGTTCCTCGG
TGCTCTTGCCTCTGTTTTGCTTTTTTTTTAAAGAAAAATCTAAACGCATA
TAAACCTTCTGAGCATCCATCCACCTTCAGTGGAAAAAATGTCTCAAGTC
CTGGTGTACCTTCATGGCGTTTGACGTACAGCATAACGGTGGGCTCCTCC
TCGAAATTACACAGTTGATCCAATGCTACCAATACCATCGGGAAACCCAC
GAAATGCCATGTAGAGTTTTTGTCCTTAGTCTATGCTCCTGAATAGTCTA
TATACCTAAACGTTTCGACAATCTTCCCCCTGGTTGAGTGGATGCGCAGG
AGGTTCAGATGCGTTCCTTAATTTTTTTTCTTGGTATTCAAATTTTGCTA
TGTGTAGCCTAGAGTCAATCAGTGTAATATCGGGGAGAAATGCACCGCCA
TAATGCACCGCTATATCGTGCACTCTACATGAGGAGAGACGAGGTATGTA
GATGGCGGGGAGCTGGTATTATTTTTTTATTTTCTTACAAAATATGACTC
CTCCGAAAAGGTGGTGCACTACTCGTAGAACCTTGCTTGTTTTCCCCCGT
TGCGGTCGGCGATCGTTCAAGAACTCCATGGTGATGTCCGCCATGCAACC
AAAAAGATACCAGTAATCCTACCTTCTTTGTAGCTCTACTATATTGCACA
GGTACCAAATCTAGGATCTCAGTATTATACTGTACTGGTATTATGGCATG
AATAGCTGTGCCCACCTGAACCTCTCCATGTGTCGGCGAGATTCTTGTGT
GTGCAGAGTTCCTTGCACAGGTACCAATTCTAGGATCTCAGTATTATACT
GTACTGGTATTATGGCATGTCGGCGAGATTCTTGTGTGTGCAGAGTTCCG
GACAAAAAATCTGAACGCATCCAAACCACCTTCGGAGCATCCACACTACC
TCTATCAATGGGAGTTGCCAGTGTCGAAACATTTTGTCTGGGGACGTACA
ATGTTATTCATAGTGCAAAAACTCCACTCGGGATCCCGTCGGGTTCCGTT
CTGTTGGCACAAATTGTTGTGGGCTCCTGAGTTGCCACGTGTATGTGGGG
GGGGGGATAGTTCCACACGCCTACGCTTTTCATTCCCTTCTTAATTTCAA
GACGTTAACAAGAGCCTTCTAATGGTTGAGGCTTGCTTGCTCGCGCGTTT
TCCCGCACAGCCGCCAACAACTGGCGCACACGTAACAGCAGCAAGATTTC
CCGAGATTCGAACTCTCAGCACCACTCCAAAGCGGATCGTGCGGGTTACC
AGGTGGATGGGCGGCCACACACTCTAGAGCTCTCTTATAACAAAAACATC
ACCGTCGACGCGACTCGACGTCTCTCTGGTTACATATCTCCCATACAGCT
CTAGGCCTTATCTTTCCCCCCGCCTGCCCTACCCTGTGTGTGGCCTTACA
TGCGTTCCCGGCAACTATAAAATGCCCTTGATCACAGATAAAGCAGGGCA
CCTGGTTCGTCAAGTTCTACACGGATTGGTG GTGAGTTTTTTTTATGACT
TCGTAACTACTACCTGGTATTAATATTATAGATCGCTACAGAACGGTATT
AATAGCTTTTCTTTCTTTCATCTACTCAAGTAATTTGTGCCAAATAACTG
CACCTAACTCTCCACCCCGAATTATTTGTCTTCTAGAATCAAAAGTGGTT
CTTATGTGTTCCGTTCTTGCCGACTTAACTTCACAAAACACGAGCGTGTA
ACCGGATTCAGCCTGAGTGTGACATTGCTCTCATTCAAATAGCCATCCAA
TAACTGTAGCATGTAGTTCCTAGTTCCTGTCGGCTGCCCAGCGGGAAGAG
TCCCCTCGTCTTCCCATTTAAATATCACGTCGAAGAAAGCGAGGTTGGAT
CGCAGGAGCTGGTGCGTAGTTTGCATCTCCAGAAACACAGCTCGTGCTCC
CCCAAGGAGGAGGCGTGTCTTGTAATATTAATAGTAAGAAGTTCTCTGGA
GTTTATTAGGATTACAGCTCTCTTGAGTGCGTCTACTTGAGCCCCCTCTT
TGTAAATCAAAAATCCGAGAGGGCGGGGCTGGGTCGCGGCTTTCGAGTTT
GTTCGCTGGGGTTATCGTACTTGGGCTGCCCCGACGAAAAAGGCGGCAAA
ATTATCTTACGACAACTGCCTCTCGGATCACATATGTACGCGAACGAATC
AAAATTTCTGCTCGAATCATAGTACCTTGTGAACGTGGATCGCGAGAATG
ATCTGTACAGATTTACCACCCCCCCTCCCCCCTCCCTGTAGGACAAAAAC
AAATCAAAACATTACCCATTATCTGACAAAAAAACGCAACTTTTTCTTTT
TTACCTCATGCTACGCGCGAAACAAATCAAAGCTCACACTGCAAGCAACT
TCAGCCGACTTGGGAGGAGCTGGCCAAGGATCTCAAGGGAAAG GTCTGCT
AAATCATTGGGTTCTGGATCGTATATCGCCTCTTGTTGGTTTTGGGACTA
TGATAGACGTATTCAACGGGGCTGTGATGTCTCACTGAACAACGACGACT
CGGTGCTTGCGTCGAGCTCGCTATATCCTTCCGCTATGCGTGCGTGGGGT
GGCTAACGCTCGAATCGTGTCATGAGCCGAAATCCATATCGATGTTTGGT
TGTCTTACCCAAGTCCCGTCGTTCGAGTGGCGGAGGTGACGTTCGTGTCG
GCGCCCGCCCTATTGAAATTTCCCCAAGGTGCGGGTGGGTCAGGTGAATT
GCGAAACGGACAGAGCGCTTTGCAGCCGCTTTCACGTCAAGGGATATCCA
ACCCTGGTTCACGTTCACAATCGCAAGTGCCGCGTGTATAAG GTAAGCGA
TCTCTCTTGTGACGAACAGATCTACACCAAGGTAAGCCGGCCGCGCCGGA
CCAATACGCGTGCGATTCGACGCATGTCCTGGCCAGCTCAGACGGGCCAC
ACGTTTTGCAAAGAATTCCAAACAGGAACACAGGCCAGGCGGCACCAAGT
TGTTGCGGCATTCCGTGATTGAAAGCGAAGGTTTGCAGGAGAGAGTAGGC
CATCGGTAATGTCGGTTGAGTTGCGGCCTCTGCTGCGCTGCTTGCTTGAT
GGCACGATTTATGTTTGTTCATATTTGTGCCCCGTAAGCCTCAGGGGTCT
CCCTCGCCCTCATTTTCGACCCGCGAATCGTCTGATCCCTCAACGCGTGT
GCGTGAATCCGCAGCTAAAATCGCGTGCCAAGAGCGCCTTGATTTACTTT
GCGGAGAAGGGGTACACGAAGTCGGCGGCGATATCCGCGTTGAAGTCTCC
CTTCGGACCTATCGAGAGCGTCAAGGCCCGTCTAGTGGAGGCCATCATAC
TCTCACGGAAGTTCGTCTTGGAACAAGTGGCATCGGGGACACCAAT GTGA
GTCCAACCATTACCGGTGGGGGGGCAGGAGTGAGGGAGGGATTTTTTGCG
TTAAATGCGTCGACCGACGCTCGCCCCGCCGCGTGTGCTGCAGATCAAGG
GTCTTGTCAAGTGTGCATGACCGCGTCCTTTTGTTGCGACGATGGCTTGT
GGTGGCGAACAGCTTTAGAGAGCATCAGACGGGCGTGTGCAGCAGCCACT
CGGCGAAGAGAGGTTTGACGTCGCTCGATGAGATGTCTGTGCAAGAACGG
CGTCGAAGACACCGCCTGCACCCAAGAAAAGATATCCCCGCACGAGGAAC
GTAAAATACTGCTTCCCTCCTCCCCAGTTCCCTCTCTCTCTATTTTTTCT
GTTACGTGTGAGTTTGACCACGTTTTGTATTGGTTTCAGCATGTAACCTC
ATCATCCCGCCCTCCCGCCCCCCCACGCCTTCGTCTTGACCAAAATTGCG
AATCACGTGCATGTCGATATTACGTAGATGGTTATTGTGCATCTATGCCG
TGAGCGGGCTTGTGGTTATGACGACTGCCATCTCATTAATCCTGGTGGCA
ACCAAGAGACCAAAACAAGATTGA AGGAGTCGGGCGCTGGCGAAGGTTTT
GCCGGAAGACTCTGATCCCGTCTCGCCTTACGCTACGGTTATATGTTTCA
ATGTGTTGTAGTATTGGTGGTACTACTGTGTAAGGTGAATGGAGTAGTTA
CTGGAATGTTACTGGGATGTAGATGTAAAGCTATCGATAGTAGGTAATAT
GATGCGGTGTGTAGGTGTACCAAGGGGGACGGCGAGAGTCACGACAATAG
GGGGATAGAAGCCCCCGATCCCCCCTCCTCCCCCACCTTAAGTTGACAGC
CGTGAGCAAGCTCCTCGTACGCATTTGACATTCGGCGAAATCGTCGCCCA
TCCGCAGAAACTAGCGTTTGATTTCTGCGTTTTTACATAGTTACGCTAGA
AAACCGGGCGGGGACACCAATACAAATCTTACAAAGGGTCCTTACAAAAA
CCGTCATCCCGTCACCCACGGTGTGTGCCCTGACGCATGGCCTCCCGCGC
CTTCCTGAGAGCGAGTGGTGATGAGGAAAAAGAGAGAAGACTCGTCACCT
TTTTATCTCTGTTTTGGCGAGAGTTGAATGGGGAATCTTACCCATTGAAG
ACGTTTGCTCGGTGTACCAGCTGAGGACGCTGGACTTCGAGGGAGTTCGT
ACTGATGACCTCCCGACGCGTGACTCTTGAGGGTGTGTTATTGGCACCCG
TCACCTGTGTAGTAACGCAGTTTTCGTGTGTCGGCAGACCCAAGCGCCTT
GTGATTGGATAGACGTGATTTCTAACCAAGCGCCCCCGGATTCGAAATCG
TTATCCGTGCCCTATATTATATTTCCCTTCTATCACGACAGCAGTCTTCC
TTTCGAGTTGTGGTAAAGCTTTGAGCTCCCTGTAAATGTTGGGAGCCTAG
GCTGGATCTGTCGTCTCCGAACGTGTTTGTGTCGCGGTAATTTTCGGTTT
CCGCTCCGAAGTTCGGTACGTTGCCCAAACGGGCGCTTCTGAGACAGCTC
GAGGGTACGAAATGTGCCGGTGACAGGGCGTGGACTCCGCCCGGAGTCGG
CATCGAATCCGTCCAAAAGGGGACCCCCCGGGTTCTGGTTTTGCTACTCG
CTCGTTACGTATAATACAAGTTTTGCAACGTTTCGAGTACTCGTAGTGGT
TTCGCGTCTCGACGGGGCGAAAACGCTTGTGAGAATGATTCATCAAACAA
CGCGAAAGCGACGTTTTTGGGGTTTTGAAGTCGGGATGTCGCTCGCTCGG
CGTAGGAACGCAAGTAAACTACACTTCCGTACCTATCCAAATCGGGCTTC
CGTCAACAGAAATTGCGATCGTCAGTTGTAAATGTTCAAAATTCTTTCAT
CGCTTCTGTTTTTACTCGCCCCCCCACTCTGTTGCGGCATGTACGTGCGT
GCGTCGCCTATTTCGATGAGCGATGGATTTGGTTCCACTTTCACCAGTTG
CTTCGTGGAGTGTGTTTGACAAGCGCTTACCCCTTGATTTTGAGCTGAAC
GTTTGCGTTGTCTCACGGCGGGAGTCCTCCGGTCGGCGGTATGAATAGCT
TCTCGCGGACATGCTCCCCTTTCTTACTATAAATACTAAATACTTATGGT
ACACGTTACAATCACGGCTGCCTTCCATGATTATCATGATCTTGAGTACA
GTTTGCTCCCGCGCATATATTTATTCGCAACCGCCCTTCGTTTCATTGAC
AAGCGCGCTCTGCGTCGACTTATT back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10195:5160..11383+
>mRNA_P-canaliculata_contig10195.285.1 ID=mRNA_P-canaliculata_contig10195.285.1|Name=mRNA_P-canaliculata_contig10195.285.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1470bp|location=Sequence derived from alignment at P-canaliculata_contig10195:5160..11383+ (Pelvetia canaliculata dioecious) back to top