Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 590 |
| Cds size | 486 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815591.5687826-UTR-P-canaliculata_contig101939:361..465 | 1622815591.5687826-UTR-P-canaliculata_contig101939:361..465 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101939 362..465 + |
| 1693494154.5787048-UTR-P-canaliculata_contig101939:361..465 | 1693494154.5787048-UTR-P-canaliculata_contig101939:361..465 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101939 362..465 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815591.580057-CDS-P-canaliculata_contig101939:465..951 | 1622815591.580057-CDS-P-canaliculata_contig101939:465..951 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101939 466..951 + |
| 1693494154.5968735-CDS-P-canaliculata_contig101939:465..951 | 1693494154.5968735-CDS-P-canaliculata_contig101939:465..951 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101939 466..951 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101939.284.1 >prot_P-canaliculata_contig101939.284.1 ID=prot_P-canaliculata_contig101939.284.1|Name=mRNA_P-canaliculata_contig101939.284.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=162bp
MQMERHVFTLSSRVSDPKNHVSNILTTVLSASSDIKKDFISKATQSKSNV
VQQYTLRWRKIEMVNAPLLIQRFVHLARLDCSYRLSYLVRQICGHDGRIY
NNRRQAKKHKGKKQRANRQKYIRQTFLSVRKVTSSFFADPYQIAYSARST
TRSSLAAGASS* back to topmRNA from alignment at P-canaliculata_contig101939:362..951+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101939.284.1 ID=mRNA_P-canaliculata_contig101939.284.1|Name=mRNA_P-canaliculata_contig101939.284.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=590bp|location=Sequence derived from alignment at P-canaliculata_contig101939:362..951+ (Pelvetia canaliculata dioecious)
CTTGGCACTCTGATGACCTCGTACAGGTCGTATCTAATTCGTGCATAACG
TATTCTTATCTGACGACTCAATTTCGACATTCTACATCCTCCGTACCGTA
GAAAATGCAGATGGAAAGACATGTTTTTACCTTATCGTCAAGAGTTTCTG
ATCCGAAAAATCATGTCTCAAATATATTGACTACAGTACTATCTGCCAGT
TCAGACATCAAGAAAGACTTCATTTCAAAGGCAACGCAATCAAAGAGCAA
CGTTGTACAACAGTATACCCTTCGTTGGCGAAAAATCGAGATGGTGAATG
CTCCTCTCCTGATACAGCGGTTCGTGCATCTGGCACGCCTCGATTGCTCC
TATCGCCTTTCGTACCTGGTTCGGCAAATTTGCGGACATGACGGAAGAAT
ATACAACAATCGAAGACAGGCAAAAAAACACAAGGGAAAAAAACAACGCG
CAAACAGACAGAAGTACATACGACAAACATTTCTCTCTGTCAGAAAAGTA
ACGAGTTCATTCTTTGCCGACCCCTATCAAATTGCCTATTCTGCTCGTTC
GACCACGCGGTCATCCCTCGCTGCTGGCGCTTCTTCGTAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101939:362..951+ >mRNA_P-canaliculata_contig101939.284.1 ID=mRNA_P-canaliculata_contig101939.284.1|Name=mRNA_P-canaliculata_contig101939.284.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=972bp|location=Sequence derived from alignment at P-canaliculata_contig101939:362..951+ (Pelvetia canaliculata dioecious)
ATGCAGATGGAAAGACATGTTTTTACCTTATCGTCAAGAGTTTCTGATCC
GAAAAATCATGTCTCAAATATATTGACTACAGTACTATCTGCCAGTTCAG
ACATCAAGAAAGACTTCATTTCAAAGGCAACGCAATCAAAGAGCAACGTT
GTACAACAGTATACCCTTCGTTGGCGAAAAATCGAGATGGTGAATGCTCC
TCTCCTGATACAGCGGTTCGTGCATCTGGCACGCCTCGATTGCTCCTATC
GCCTTTCGTACCTGGTTCGGCAAATTTGCGGACATGACGGAAGAATATAC
AACAATCGAAGACAGGCAAAAAAACACAAGGGAAAAAAACAACGCGCAAA
CAGACAGAAGTACATACGACAAACATTTCTCTCTGTCAGAAAAGTAACGA
GTTCATTCTTTGCCGACCCCTATCAAATTGCCTATTCTGCTCGTTCGACC
ACGCGGTCATCCCTCGCTGCTGGCGCTTCTTCGTAGATGCAGATGGAAAG
ACATGTTTTTACCTTATCGTCAAGAGTTTCTGATCCGAAAAATCATGTCT
CAAATATATTGACTACAGTACTATCTGCCAGTTCAGACATCAAGAAAGAC
TTCATTTCAAAGGCAACGCAATCAAAGAGCAACGTTGTACAACAGTATAC
CCTTCGTTGGCGAAAAATCGAGATGGTGAATGCTCCTCTCCTGATACAGC
GGTTCGTGCATCTGGCACGCCTCGATTGCTCCTATCGCCTTTCGTACCTG
GTTCGGCAAATTTGCGGACATGACGGAAGAATATACAACAATCGAAGACA
GGCAAAAAAACACAAGGGAAAAAAACAACGCGCAAACAGACAGAAGTACA
TACGACAAACATTTCTCTCTGTCAGAAAAGTAACGAGTTCATTCTTTGCC
GACCCCTATCAAATTGCCTATTCTGCTCGTTCGACCACGCGGTCATCCCT
CGCTGCTGGCGCTTCTTCGTAG back to top
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