mRNA_P-canaliculata_contig101935.283.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: UPI00198C3A71 (Uncharacterized protein n=2 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00198C3A71) HSP 1 Score: 194 bits (494), Expect = 4.640e-62 Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 1 Query: 1 MTDSSEIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 MTDS EIDFDHLN+YV GD DLTREVFGLFRNQVEMWGRGL AD+DD++W++V HSLKGSARAVGAM LA CE AE L+GDDRRPGAREV+V+ LE RI QVL+EI RWEYKDDMRRL+S Sbjct: 11 MTDSPEIDFDHLNRYVGGDADLTREVFGLFRNQVEMWGRGLRADSDDEVWSSVAHSLKGSARAVGAMELANLCEGAETLIGDDRRPGAREVAVEKLEHRISQVLDEIARWEYKDDMRRLKS 131
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: UPI00041CDFAB (Hpt domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00041CDFAB) HSP 1 Score: 149 bits (376), Expect = 3.480e-44 Identity = 72/115 (62.61%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 16 EIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLR 360 EIDF+HLNQYV GD LT EVFGLF++QVEMWGR L DADD+ WA+VTHSL+G+A AVGA LA+ CE AE+LVGD RPG REV++Q +E RI + + EI RWEY+ + ++R Sbjct: 9 EIDFNHLNQYVGGDKSLTAEVFGLFKHQVEMWGRALIVDADDETWASVTHSLRGTALAVGATKLAQLCENAEDLVGDGNRPGGREVALQNIEFRISRTMAEIQRWEYRQTLNQMR 123
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A8J3CNE6_9PROT (HPt domain-containing protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CNE6_9PROT) HSP 1 Score: 145 bits (367), Expect = 7.200e-43 Identity = 73/115 (63.48%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 16 EIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLR 360 +IDFDHLN+YV GD LTRE+FGLF +Q EMWGRGL +DDD+W +VTHSLKGSA+AVGA+ LA CE AE LVGD RR GAR+V+VQ +E IEQ+ EI RWE+ ++ LR Sbjct: 5 QIDFDHLNKYVGGDVALTREIFGLFVHQTEMWGRGLDPASDDDVWESVTHSLKGSAKAVGAVNLATLCEAAEALVGDKRRMGARDVAVQNIEFAIEQIRTEIQRWEHAQSLKDLR 119
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A420WK33_9PROT (Hpt domain-containing protein n=2 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WK33_9PROT) HSP 1 Score: 146 bits (369), Expect = 1.020e-42 Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 10 SSEIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRSS 366 S EIDF+HLNQYV GD LT+EVFGLF++QVEMWGR L ADDD W +V HSLKGSA+AVGA GLAE CE+AE+LVG+ + G R V+VQ +E +I + + EI RWEY+ + +RSS Sbjct: 37 SHEIDFEHLNQYVQGDISLTKEVFGLFKHQVEMWGRLLDPAADDDSWGSVIHSLKGSAKAVGATGLAERCERAEQLVGETKTAGGRLVAVQDIEFKISRTITEIQRWEYRQKLNEMRSS 155
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A848V4L3_9PROT (Hpt domain-containing protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V4L3_9PROT) HSP 1 Score: 143 bits (361), Expect = 6.670e-42 Identity = 64/120 (53.33%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 4 TDSSEIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 T+++ IDFDHL QYV DP +T E+FGLF+NQV++W L +D DDD WA +THS+KG+ARA+GA LA+ CE+AE L+G+ +RPGAREVSV+ ++ I++++ EI RWEY+ + +++S Sbjct: 3 TENTHIDFDHLRQYVGDDPAMTAEIFGLFKNQVDLWSPSLVSDLDDDAWAMMTHSIKGTARAIGAFELADLCEQAELLIGEGKRPGAREVSVEKIDNEIDKIMIEIQRWEYRQTISKMKS 122
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A2G1YV19_9PROT (HPt domain-containing protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G1YV19_9PROT) HSP 1 Score: 123 bits (309), Expect = 4.610e-34 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 1 MTDSSEIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 M+D+ EIDF+H+ QY+ D DLT+EVFGLF+NQVEMW RG+ ADA+DD W + HSLKGSARAVGA LAE C K E L + RE+ + ++ IE+ L EI RWEY+ + +RS Sbjct: 1 MSDT-EIDFEHIKQYLGDDMDLTKEVFGLFKNQVEMWXRGMIADANDDSWVAIMHSLKGSARAVGAHRLAELCSKGEGLTCEKGGIEIREIHIHEVKFSIEKALIEIGRWEYRQTLASMRS 120
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A7V5U1B2_9PROT (HPt domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7V5U1B2_9PROT) HSP 1 Score: 120 bits (301), Expect = 8.040e-33 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 19 IDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 IDF+HLN Y+ G+ L EVFGLF+NQVEMW + + ADADDD WA+V HSLKGSARAVGA LA C EELVG P R + + I++ L EI RWEY+ + +RS Sbjct: 6 IDFEHLNTYLGGEVSLIAEVFGLFKNQVEMWSKMMNADADDDSWASVMHSLKGSARAVGAARLAGLCAHGEELVGASNSPIRRAAHIDEIRFEIDRALIEIGRWEYRQTLASMRS 120
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A2G2MY62_9PROT (HPt domain-containing protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MY62_9PROT) HSP 1 Score: 119 bits (298), Expect = 2.430e-32 Identity = 63/120 (52.50%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 4 TDSSEIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 T ++EIDF+H+ QYV D L +EVFGLF+NQVEMW RG+T A+DD W V HSLKGSARAVGA LA CE+ E+L G R+ + ++ IE+VL EI RWEY + +RS Sbjct: 5 TPNTEIDFEHIKQYVGDDTALIKEVFGLFKNQVEMWSRGMTPQANDDDWGAVMHSLKGSARAVGAHNLAALCEQGEKLTGSLGGLETRKAHIHDVQFSIEKVLIEIGRWEYTQTLASMRS 124
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: UPI0003A67511 (Hpt domain-containing protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI0003A67511) HSP 1 Score: 118 bits (295), Expect = 6.940e-32 Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 1 Query: 19 IDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 I+F HL QYV D LT EVFGLFR+Q +MW + L A ADD+ W ++ H+LKG+ARAVGA GLA+ CE AE L G + AR V+VQ ++ IE V + I RWEY+ + LRS Sbjct: 10 INFKHLRQYVGDDTALTAEVFGLFRHQTDMWCKALDAKADDETWISIAHTLKGTARAVGACGLADVCENAELLTGKNATATARTVAVQDIQSWIEAVNHRISRWEYRQTLAALRS 124
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Match: A0A7C5QRE9_9PROT (HPt domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5QRE9_9PROT) HSP 1 Score: 103 bits (258), Expect = 2.840e-26 Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 16 EIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWANVTHSLKGSARAVGAMGLAEACEKAEELVGDDRRPGAREVSVQTLEQRIEQVLNEIIRWEYKDDMRRLRS 363 EIDF+HL +Y+ D + EVFGLF++QVEMW + A D+ W +V HSLKGSARA+GA LA CEKAE +VG+ R ++ ++ RI+++ EI RWEY+ + +RS Sbjct: 9 EIDFEHLGRYLGDDVAVLSEVFGLFKHQVEMWSKLFDVKAGDEQWRSVMHSLKGSARAIGAKRLASLCEKAETMVGEMAIESHRGRILEDIQFRIDRINIEIGRWEYRQTLASMRS 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101935.283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101935.283.1 >prot_P-canaliculata_contig101935.283.1 ID=prot_P-canaliculata_contig101935.283.1|Name=mRNA_P-canaliculata_contig101935.283.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=123bp MTDSSEIDFDHLNQYVSGDPDLTREVFGLFRNQVEMWGRGLTADADDDMWback to top mRNA from alignment at P-canaliculata_contig101935:45..413- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101935.283.1 ID=mRNA_P-canaliculata_contig101935.283.1|Name=mRNA_P-canaliculata_contig101935.283.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=369bp|location=Sequence derived from alignment at P-canaliculata_contig101935:45..413- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101935:45..413- >mRNA_P-canaliculata_contig101935.283.1 ID=mRNA_P-canaliculata_contig101935.283.1|Name=mRNA_P-canaliculata_contig101935.283.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at P-canaliculata_contig101935:45..413- (Pelvetia canaliculata dioecious)back to top |