Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 392 |
| Cds size | 306 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815591.4577298-CDS-P-canaliculata_contig101934:27..194 | 1622815591.4577298-CDS-P-canaliculata_contig101934:27..194 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101934 28..194 + |
| 1693494154.5332692-CDS-P-canaliculata_contig101934:27..194 | 1693494154.5332692-CDS-P-canaliculata_contig101934:27..194 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101934 28..194 + |
| 1622815591.468713-CDS-P-canaliculata_contig101934:779..918 | 1622815591.468713-CDS-P-canaliculata_contig101934:779..918 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101934 780..918 + |
| 1693494154.5429933-CDS-P-canaliculata_contig101934:779..918 | 1693494154.5429933-CDS-P-canaliculata_contig101934:779..918 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101934 780..918 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815591.483161-UTR-P-canaliculata_contig101934:918..1003 | 1622815591.483161-UTR-P-canaliculata_contig101934:918..1003 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101934 919..1003 + |
| 1693494154.553776-UTR-P-canaliculata_contig101934:918..1003 | 1693494154.553776-UTR-P-canaliculata_contig101934:918..1003 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101934 919..1003 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101934.282.1 >prot_P-canaliculata_contig101934.282.1 ID=prot_P-canaliculata_contig101934.282.1|Name=mRNA_P-canaliculata_contig101934.282.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=102bp
ARADQAQLSKIYCHTRDVNLSRTLICSVCHVLRKCTHGDSAAYLHRARPG
AIGHRRCSCLGRVVVSLRQVSRLPTHRGLAEVRGRVEKRRRRPGQTSPGE
E* back to topmRNA from alignment at P-canaliculata_contig101934:28..1003+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101934.282.1 ID=mRNA_P-canaliculata_contig101934.282.1|Name=mRNA_P-canaliculata_contig101934.282.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=976bp|location=Sequence derived from alignment at P-canaliculata_contig101934:28..1003+ (Pelvetia canaliculata dioecious)
GCTCGGGCCGATCAAGCACAACTCTCAAAAATATATTGCCACACGAGAGA
CGTCAACTTGTCTCGGACCTTGATCTGCAGTGTTTGCCATGTGCTACGCA
AATGCACACACGGCGATAGCGCAGCCTACCTGCACCGAGCTCGCCCGGGG
GCCATAGGTCACAGGAGGTATTTGAAGGGTTATGACCGTTGTCCAAATAG
TATAGACTACTGAGAAACTACGAGGAACGGTCCTCGGATCCGAGACGATT
TTCTTGGTATCGTGCCACGTGACCTGCAATCCCCCCCCAGGCCAATATCC
CTGAGTCATAGGATCACGTATGTACTTTGCAGAGCTGCCATGGCGCAGTG
GTTTCTCCGTTCTCCGAGGCGCCCCGAGAGGGCTCTTCAGTTTTCTCTCT
GTTTTAAAGCTCCATTTGGCCTCCCACCCATTGGCTAGTAGCTACAGTCG
TGTGACGGTTTCATCAGTATTTTGTGCGCAAAATATATATTTTTCGGCCC
AAGTCCGTGGGGCCCCGCTAAGTAGTTATTATTAGTAATGACAAATATTA
TATTAGTTATTACTGTATGTAATGGACGCCGCCGCGGAAATTGGGAGGAA
TCCCGTAGGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTG
ACTATACATACTGGAAACCTTCCGAGAATGCACTAGAAGTATTATTTATT
AGCGGGGACCGACCATGTTGTGCTCTTGTCCCCGTGTACACTATCATAAC
AGATGTTCATGCCTGGGACGGGTCGTAGTATCCCTGCGTCAAGTTTCGAG
GCTGCCCACTCACAGAGGGTTGGCGGAGGTTCGTGGCCGCGTGGAGAAAA
GGAGAAGAAGACCCGGCCAGACGTCGCCAGGAGAAGAATGAGGCAACGAG
ATTGGGAAAGTTGTTGACGCACACGGAAGCGTAGAATTTTGCGAAGCGAC
GCCCATTGGCCTATAGCCGACGAGCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101934:28..1003+ >mRNA_P-canaliculata_contig101934.282.1 ID=mRNA_P-canaliculata_contig101934.282.1|Name=mRNA_P-canaliculata_contig101934.282.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at P-canaliculata_contig101934:28..1003+ (Pelvetia canaliculata dioecious)
GCTCGGGCCGATCAAGCACAACTCTCAAAAATATATTGCCACACGAGAGA
CGTCAACTTGTCTCGGACCTTGATCTGCAGTGTTTGCCATGTGCTACGCA
AATGCACACACGGCGATAGCGCAGCCTACCTGCACCGAGCTCGCCCGGGG
GCCATAGGTCACAGGAGGCTCGGGCCGATCAAGCACAACTCTCAAAAATA
TATTGCCACACGAGAGACGTCAACTTGTCTCGGACCTTGATCTGCAGTGT
TTGCCATGTGCTACGCAAATGCACACACGGCGATAGCGCAGCCTACCTGC
ACCGAGCTCGCCCGGGGGCCATAGGTCACAGGAGATGTTCATGCCTGGGA
CGGGTCGTAGTATCCCTGCGTCAAGTTTCGAGGCTGCCCACTCACAGAGG
GTTGGCGGAGGTTCGTGGCCGCGTGGAGAAAAGGAGAAGAAGACCCGGCC
AGACGTCGCCAGGAGAAGAATGAATGTTCATGCCTGGGACGGGTCGTAGT
ATCCCTGCGTCAAGTTTCGAGGCTGCCCACTCACAGAGGGTTGGCGGAGG
TTCGTGGCCGCGTGGAGAAAAGGAGAAGAAGACCCGGCCAGACGTCGCCA
GGAGAAGAATGA back to top
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