Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 642 |
| Cds size | 327 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815591.3912039-UTR-P-canaliculata_contig101918:24..208 | 1622815591.3912039-UTR-P-canaliculata_contig101918:24..208 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101918 25..208 + |
| 1693494154.500379-UTR-P-canaliculata_contig101918:24..208 | 1693494154.500379-UTR-P-canaliculata_contig101918:24..208 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101918 25..208 + |
| 1622815591.4186885-UTR-P-canaliculata_contig101918:535..666 | 1622815591.4186885-UTR-P-canaliculata_contig101918:535..666 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101918 536..666 + |
| 1693494154.5233126-UTR-P-canaliculata_contig101918:535..666 | 1693494154.5233126-UTR-P-canaliculata_contig101918:535..666 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101918 536..666 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815591.404612-CDS-P-canaliculata_contig101918:208..535 | 1622815591.404612-CDS-P-canaliculata_contig101918:208..535 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101918 209..535 + |
| 1693494154.5143301-CDS-P-canaliculata_contig101918:208..535 | 1693494154.5143301-CDS-P-canaliculata_contig101918:208..535 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101918 209..535 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101918.281.1 >prot_P-canaliculata_contig101918.281.1 ID=prot_P-canaliculata_contig101918.281.1|Name=mRNA_P-canaliculata_contig101918.281.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=109bp
MLSPQRSGVPGAPASAPSPSSPVMPAGGARPSSHPRLRSPPENHFSSSPL
QNFRQISPVWDRSSSAFLRAPSMALLPRSNWTFSQKLPSRGHLPPGSPTL
PAVAVSRP* back to topmRNA from alignment at P-canaliculata_contig101918:25..666+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101918.281.1 ID=mRNA_P-canaliculata_contig101918.281.1|Name=mRNA_P-canaliculata_contig101918.281.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=642bp|location=Sequence derived from alignment at P-canaliculata_contig101918:25..666+ (Pelvetia canaliculata dioecious)
GTCACGAGCTTTTCCGGCACCGCATCCCTCAGCGCCGTCGCACCACCGGC
CACTACCTTCGACCGCGCCTTCGATCCAGAATTGCTACCGCTTACTATAT
CGCAAAACTTCACTGCCAGAACCTTGGGAAACCGTTTTACGGCAGAAGAA
GAAATTACGATCCTCTCGGTTCAGCATCCTTCCAATGCTCTCTCCGCAAC
GATCTGGAGTGCCGGGCGCACCCGCCTCCGCACCCTCACCCTCGAGCCCG
GTGATGCCGGCGGGTGGGGCGAGACCCAGCTCGCATCCCCGCTTACGATC
GCCGCCGGAGAATCATTTCTCGTCGTCACCACTACAGAATTTTCGTCAGA
TTTCCCCCGTCTGGGATCGGAGCAGTTCCGCTTTCCTGAGGGCACCGTCG
ATGGCGCTTTTACCTCGTTCGAACTGGACGTTTTCCCAGAAACTTCCGTC
TCGGGGACATTTGCCGCCGGGTTCACCTACGCTGCCGGCGGTGGCGGTTT
CACGCCCGTAAGCCCGGCCACCACAGGCTTCTTCACCGATGGCCGTTGGA
CTGGTGAAATCACCGTCGGCACCGCTGCCCCTGCCGTCCAGCTCGTCGCA
ACCGGGGCCCCTGCCCCCGGCCTCTCCTCGCCGGTTACCATC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101918:25..666+ >mRNA_P-canaliculata_contig101918.281.1 ID=mRNA_P-canaliculata_contig101918.281.1|Name=mRNA_P-canaliculata_contig101918.281.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=654bp|location=Sequence derived from alignment at P-canaliculata_contig101918:25..666+ (Pelvetia canaliculata dioecious)
ATGCTCTCTCCGCAACGATCTGGAGTGCCGGGCGCACCCGCCTCCGCACC
CTCACCCTCGAGCCCGGTGATGCCGGCGGGTGGGGCGAGACCCAGCTCGC
ATCCCCGCTTACGATCGCCGCCGGAGAATCATTTCTCGTCGTCACCACTA
CAGAATTTTCGTCAGATTTCCCCCGTCTGGGATCGGAGCAGTTCCGCTTT
CCTGAGGGCACCGTCGATGGCGCTTTTACCTCGTTCGAACTGGACGTTTT
CCCAGAAACTTCCGTCTCGGGGACATTTGCCGCCGGGTTCACCTACGCTG
CCGGCGGTGGCGGTTTCACGCCCGTAAATGCTCTCTCCGCAACGATCTGG
AGTGCCGGGCGCACCCGCCTCCGCACCCTCACCCTCGAGCCCGGTGATGC
CGGCGGGTGGGGCGAGACCCAGCTCGCATCCCCGCTTACGATCGCCGCCG
GAGAATCATTTCTCGTCGTCACCACTACAGAATTTTCGTCAGATTTCCCC
CGTCTGGGATCGGAGCAGTTCCGCTTTCCTGAGGGCACCGTCGATGGCGC
TTTTACCTCGTTCGAACTGGACGTTTTCCCAGAAACTTCCGTCTCGGGGA
CATTTGCCGCCGGGTTCACCTACGCTGCCGGCGGTGGCGGTTTCACGCCC
GTAA back to top
|