mRNA_P-canaliculata_contig10190.276.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A5N7BJ63_9EURO (Alginate lyase 2 n=1 Tax=Aspergillus bertholletiae TaxID=1226010 RepID=A0A5N7BJ63_9EURO) HSP 1 Score: 210 bits (535), Expect = 4.380e-62 Identity = 119/257 (46.30%), Postives = 155/257 (60.31%), Query Frame = 1 Query: 292 LVALVASLAHLSLVA-GAGCAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTR----EWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 L+A + LA VA CAPGG DLS + L LPT G + ++ GC+GY + F +S + M V GSPSS C TT NS HCRTELRE+ P W P NRLRATV V D+G+ GT+IGQIH++ + P +LYYS+SG L V+ + D G+ ++T++G +P+G+KF+YEIRYE++ELSVSIN E +K DTY LN+P FK GNYNQGD+ S V FY L+I H Sbjct: 7 LIAAILCLAIEGTVALDPKCAPGGNFDLSYWNLQLPTGKTGH--PTTKTPSQLKGCDGYQESGVFYTDSK-------DGALVMKVPGSPSSAGCVTTPNSKHCRTELRELSPDSGDKASWSPSASKNRLRATVTVPTPDDGSHGTVIGQIHIDDTISTKPVCELYYSKSGDLVMGVEKTRDGGKSIFTKVGSVPVGDKFSYEIRYESNELSVSINGEEPKKLDTYSLNSPKSYFKAGNYNQGDSASEVHFYELDIQH 254
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A4S3JMN1_9EURO (Alginate_lyase2 domain-containing protein n=2 Tax=Aspergillus tanneri TaxID=1220188 RepID=A0A4S3JMN1_9EURO) HSP 1 Score: 202 bits (514), Expect = 5.530e-59 Identity = 113/254 (44.49%), Postives = 147/254 (57.87%), Query Frame = 1 Query: 313 LAHLSLVAGAG-----CAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTR----EWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 L L + GA CAPGG DLS++ L LP G K+ GCNGY +K FF + T + M V GSP + DC TT NS HCR+E RE+ P WDP NRL+AT+ V D+ GT+IGQIH++ S P +LYYS+SG LT V+ + D G+ +T++G + +G KFTYEIRYE+D+LSVSIN G + DTY+L +P FK GNYNQG++ S V FY L + H Sbjct: 8 LVSLLAIQGASALDPKCAPGGNFDLSVWNLQLPIGEKGHPTTITPA--KLKGCNGYQNKKFFYTD-------TQDGSLVMKVPGSPDNSDCVTTPNSKHCRSEFRELAPDSGDKASWDPSESTNRLKATLTVTNPDDSKHGTVIGQIHIDDKISSKPVCELYYSKSGDLTMGVERTRDGGDSKFTKVGNVAVGTKFTYEIRYESDKLSVSINGGSPKSLDTYELKSPKSYFKAGNYNQGESASEVHFYELTVQH 252
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: B8NU59_ASPFN (Alginate_lyase2 domain-containing protein n=18 Tax=Aspergillus TaxID=5052 RepID=B8NU59_ASPFN) HSP 1 Score: 202 bits (513), Expect = 8.280e-59 Identity = 117/264 (44.32%), Postives = 154/264 (58.33%), Query Frame = 1 Query: 283 RTGLVALVASLAHLSLVAGAG-----CAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVL----PTREWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 ++ L A++ LA V GA CAPGG DLS + L LPT G + ++ GC+GY + F +S + M V GSPSS C TT NS HCRTELRE+ W P P NRL+ATV V D+G+ GT+IGQIH++ + P +LYYS+SG L V+ + D G ++T++G + +GE+F+YEIRYE+DELSVSIN QK DTY L++P FK GNYNQGD+ S V FY L + H Sbjct: 4 KSALTAVILCLA----VEGAAALDPKCAPGGNFDLSYWNLQLPTGKTGH--PATKTPSQLKGCDGYQESGVFYTDSK-------DGALVMKVPGSPSSTACVTTPNSKHCRTELRELSFDSGDKASWSPSAPKNRLKATVTVPTPDDGSHGTVIGQIHIDDTISTKPVCELYYSKSGDLVMGVEKTRDGGNSIFTKVGNVSVGERFSYEIRYESDELSVSINGAAPQKLDTYSLDSPRSYFKAGNYNQGDSASEVHFYELNVEH 254
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: S3DSQ4_GLAL2 (Concanavalin A-like lectins/glucanase n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3DSQ4_GLAL2) HSP 1 Score: 201 bits (512), Expect = 9.410e-59 Identity = 108/243 (44.44%), Postives = 148/243 (60.91%), Query Frame = 1 Query: 319 HLSLVAGAGCAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTREWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 L+L CAPGG DL+ + L L T G+ D ++AGC GY DK+ F +S + M V GSP+S C TT NS HCRTELRE+ P+ WDP NRL AT++V AD+ N GT+IGQIH++ + P +LYY+++G++T V+ + G +YT++G +P+G KF Y I YE + L V+IN G+ + T +L+AP FKVGNYNQGD+ S VRFYA+E H Sbjct: 15 RLALALNTDCAPGGNFDLTGWNLQLSTGDPGK--PDTIPGSQLAGCKGYQDKSTFYTDSK-------DGALVMKVIGSPASTGCVTTKNSKHCRTELREIKPS-SWDPNAKTNRLNATIQVTKADDSNYGTVIGQIHIDDSISTKPVCELYYNKAGVITMGVEKTRAGGSSIYTQVGNVPVGTKFDYAIIYEKNVLGVTINGGKLKTLSTNELDAPKSYFKVGNYNQGDSASEVRFYAIETKH 247
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A0L1J0H4_ASPNO (Alginate_lyase2 domain-containing protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A0L1J0H4_ASPNO) HSP 1 Score: 201 bits (510), Expect = 2.320e-58 Identity = 116/260 (44.62%), Postives = 152/260 (58.46%), Query Frame = 1 Query: 283 RTGLVALVASLAHLSLVA-GAGCAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPT----REWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 ++ L+A V LA VA CAPGG DLS + L LPT G + K+ GC+GY + F +S + M V GSPSS C TT NS HCRTELRE+ W P NRL+AT+ V D+G+ GT+IGQIH++ S P +LYYS+SG L V+ + G+ ++T++G +P+GEKF+YEIRYE+D+LSVSIN Q DTY L++P FK GNYNQGD+ S V FY L + H Sbjct: 4 KSSLIAAVLCLAIEGTVALDPKCAPGGNFDLSYWNLQLPTGETGHPSTIVPS--KLKGCDGYQESGVFYTDSK-------DGALVMKVPGSPSSAHCVTTPNSKHCRTELRELSSDGGDKASWSPSASKNRLKATLTVPTPDDGSHGTVIGQIHIDDTISSKPVCELYYSKSGDLVMGVEKTRAGGKSIFTKVGNVPVGEKFSYEIRYESDKLSVSINGEAPQTLDTYSLDSPKSYFKAGNYNQGDSASEVHFYELNVQH 254
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A0F4YMS4_TALEM (Alginate lyase n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YMS4_TALEM) HSP 1 Score: 199 bits (507), Expect = 6.470e-58 Identity = 112/255 (43.92%), Postives = 150/255 (58.82%), Query Frame = 1 Query: 304 VASLAHLSLVAGA---GCAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTR----EWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 +AS LS +A A CAPGG DLS +EL LP S G ++ GCNGY + ++F +S+ + M V G P+S C TT NS HCRTELRE+ P+ WDP NRL AT+ V+ ADN GT+IGQ+H++ S P +LYYS++G LT V+ + G ++ T++G +PL +F+YEIRYE++ LSVSIN G Q TY L+AP FK GNYNQG + S V FY + + H Sbjct: 9 LASXXXLSTLAAALNPSCAPGGNFDLSYWELQLPIGSSGH--PTTISSSQLQGCNGYQNPSYFYTDSN-------DGSLVMKVPGDPASTGCVTTPNSQHCRTELREMDPSSGAAASWDPNAATNRLSATLTVVQADNSKYGTVIGQVHIDDSVSSKPVCELYYSQNGDLTMGVEQTRSGGNEVMTKVGNVPLNTQFSYEIRYESNVLSVSINGGAQQTLSTYQLDAPKSYFKAGNYNQGSSQSEVHFYEISVQH 254
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: V5I036_BYSSN (Alginate_lyase2 domain-containing protein n=2 Tax=Byssochlamys spectabilis TaxID=264951 RepID=V5I036_BYSSN) HSP 1 Score: 199 bits (506), Expect = 7.360e-58 Identity = 114/259 (44.02%), Postives = 153/259 (59.07%), Query Frame = 1 Query: 277 MHRTGLVALVASLAHLSLVAGAGCAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKN--FFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTREWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 M+ T + L+ S A ++L GCAPGG DLS + L LP S G + GCNGY D +F ES G + M V GSPSS C TT NS HCRTELREV P+ WDP NRL AT++V AD+ + GT+IGQIH++ S P +L+Y+ +G ++ V+ + G ++ T + +P+ F+YEI+YE++ LSVSIN G + F TY L+AP FKVGNYNQGD+PS V F+A+ H Sbjct: 1 MYATTIATLLFSAAVIAL--NPGCAPGGNFDLSKWNLQLPIGSAGS--PTTISSSSLQGCNGYQDPGHQYFFTES-------GDGALVMKVPGSPSSSGCVTTPNSQHCRTELREVSPS-SWDPNAATNRLSATLKVTQADDSSHGTVIGQIHIDDSVSSKPVCELFYNSNGDISIGVEQTRSGGNEVVTYVDNVPVATTFSYEIQYESNVLSVSINGGAAKTFSTYSLDAPESYFKVGNYNQGDSPSDVHFFAISTQH 247
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A370U1L9_9HELO (Alginate_lyase2 domain-containing protein n=1 Tax=Venustampulla echinocandica TaxID=2656787 RepID=A0A370U1L9_9HELO) HSP 1 Score: 198 bits (503), Expect = 2.540e-57 Identity = 110/254 (43.31%), Postives = 152/254 (59.84%), Query Frame = 1 Query: 292 LVALVASLAHLSLVAGAGCAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKN--FFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTREWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 ++ L +++ + CAPGG DLS + L LP S G I+ D + GC+GY D +F ES G + M V GSPSS DC TT NS HCRTELRE P+ WDP NRL+ATV V AD+ RGT++GQIH++ + P +LYY+ G+LT V+ + G+ +T + +P+G F+YEIRYE + LSVS+N G + +T+DL+AP FKVGNYNQG++PS V +A+ + H Sbjct: 11 IILLGCAISRATAALDPTCAPGGNFDLSKWNLQLPIGSTGS-PTTIKSTD-LQGCSGYQDPGHKYFFTES-------GDGALVMQVPGSPSSSDCVTTKNSLHCRTELRESNPS-SWDPNAAKNRLKATVAVTVADDSKRGTVVGQIHIDDSISTKPVCELYYNAQGVLTMGVEKTRAGGDSNFTTIATVPVGTTFSYEIRYETNVLSVSVNGGAMKVLETFDLDAPKSYFKVGNYNQGNSPSDVHVFAISVEH 254
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A6A5V867_9PLEO (Alginate lyase 2 (Fragment) n=1 Tax=Bimuria novae-zelandiae CBS 107.79 TaxID=1447943 RepID=A0A6A5V867_9PLEO) HSP 1 Score: 196 bits (497), Expect = 8.930e-57 Identity = 108/236 (45.76%), Postives = 145/236 (61.44%), Query Frame = 1 Query: 346 CAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKNFFAGESSGCSSGTGKA--YVQMDVCGSPSSCDCDTTGNSDHCRTELREVLPTREWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 CAPGG DL+ ++L LPT + + D I+ K+AGC+GY+DK+ F T KA + + VCGS SSC C TT NS HCRTELRE P W P VNRLRA+++V+ AD+ GT++GQIHV+ + P +L+ + G++T V+ D+ YT++G + +GEK+ YEIRYE LSVSIN G +K T L P FK GNYNQGD+ S V FY ++I H Sbjct: 5 CAPGGNFDLTKFKLQLPTGTSNKPD-SIDGS-KLAGCSGYTDKSVFH---------TNKADGALVLKVCGSSSSCGCVTTKNSKHCRTELRESKPA-SWSPHASVNRLRASLKVVKADDSPHGTVVGQIHVDEEVSKKPVCELFVDQKGVVTMGVEQIPDEASLKYTKVGKVKIGEKWDYEIRYEKGALSVSINGGAMKKLSTGQLTGPASYFKAGNYNQGDSESEVHFYIIDIQH 228
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Match: A0A5N7CBV1_PETAA (Alginate lyase 2 n=3 Tax=Aspergillus TaxID=5052 RepID=A0A5N7CBV1_PETAA) HSP 1 Score: 195 bits (495), Expect = 3.810e-56 Identity = 110/239 (46.03%), Postives = 141/239 (59.00%), Query Frame = 1 Query: 346 CAPGGILDLSIYELHLPTYSGGEFDIDIEREDKIAGCNGYSDKN-FFAGESSGCSSGTGKAYVQMDVCGSPSSCDCDTTGNSDHCRTELREV----LPTREWDPKGPVNRLRATVRVMAADNGNRGTIIGQIHVNTDDVSAPAAKLYYSESGMLTFDVKTSIDDGEDMYTELGVIPLGEKFTYEIRYENDELSVSINDGEFQKFDTYDLNAPPCDFKVGNYNQGDTPSSVRFYALEISH 1047 CAPGG DLS + L LPT G K+ GC GY D + F+ + G + M V GSPSS C TT NS HCRTELRE+ W P NRL ATV V D+G+ GT+IGQIH++ + P +LYYS G L V+ + G+ ++T++G P+G+KF+YEIRYE+DELSVSI+ G QK DTY+L++P FK GNYNQGD+ S V FY L + H Sbjct: 25 CAPGGNFDLSYWNLQLPTGESGH--PTTITASKLKGCKGYQDSSVFYTDDKDGA--------LVMKVPGSPSSGACVTTPNSRHCRTELRELNSDGSSKASWSPSASKNRLSATVTVPKPDDGSHGTVIGQIHIDDTISTKPVCELYYSTEGDLVMGVEKTRKGGKSIFTKVGNAPVGKKFSYEIRYESDELSVSIDGGSPQKLDTYELDSPKSYFKAGNYNQGDSASEVHFYELNVQH 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10190.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10190.276.1 >prot_P-canaliculata_contig10190.276.1 ID=prot_P-canaliculata_contig10190.276.1|Name=mRNA_P-canaliculata_contig10190.276.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=258bp MHRTGLVALVASLAHLSLVAGAGCAPGGILDLSIYELHLPTYSGGEFDIDback to top mRNA from alignment at P-canaliculata_contig10190:3905..5268- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10190.276.1 ID=mRNA_P-canaliculata_contig10190.276.1|Name=mRNA_P-canaliculata_contig10190.276.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1364bp|location=Sequence derived from alignment at P-canaliculata_contig10190:3905..5268- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10190:3905..5268- >mRNA_P-canaliculata_contig10190.276.1 ID=mRNA_P-canaliculata_contig10190.276.1|Name=mRNA_P-canaliculata_contig10190.276.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1548bp|location=Sequence derived from alignment at P-canaliculata_contig10190:3905..5268- (Pelvetia canaliculata dioecious)back to top |