Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 834 |
| Cds size | 834 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815590.7527297-CDS-P-canaliculata_contig101870:119..953 | 1622815590.7527297-CDS-P-canaliculata_contig101870:119..953 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101870 120..953 - |
| 1693494154.2120953-CDS-P-canaliculata_contig101870:119..953 | 1693494154.2120953-CDS-P-canaliculata_contig101870:119..953 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101870 120..953 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101870.272.1 >prot_P-canaliculata_contig101870.272.1 ID=prot_P-canaliculata_contig101870.272.1|Name=mRNA_P-canaliculata_contig101870.272.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=278bp
MTSTVTDGALHFVHLADSHVASGDTRGVDLVRLEGVVERLRDLHARGVPI
DFVVHGGDLVDDADEPDARPDTTAAALGVLDALPVRWFLLNGNHDRRAFL
TAESVDAAGTRPSGLGEVPTTDATGVAARLAGAAQLLFVDANPERGERAQ
LEGVIPLDAIASVARRIDAHSGRSLVFLHYPPLRQEAAWSGAPSGGEALH
AVLAARSDRLHGVFVAHNHRSLHHVRDGVLYATAPALSRSLLLWPDQATL
AFDDEPVLGLHYVTLGADGSTRVQHHAF back to topmRNA from alignment at P-canaliculata_contig101870:120..953- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101870.272.1 ID=mRNA_P-canaliculata_contig101870.272.1|Name=mRNA_P-canaliculata_contig101870.272.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=834bp|location=Sequence derived from alignment at P-canaliculata_contig101870:120..953- (Pelvetia canaliculata dioecious)
ATGACGTCGACCGTGACCGATGGCGCCCTGCATTTCGTCCACCTCGCCGA
CAGCCACGTCGCGTCCGGCGACACCCGGGGCGTCGATCTCGTGCGGCTCG
AGGGCGTCGTCGAGCGGCTGCGCGATCTGCACGCGCGCGGCGTCCCGATC
GACTTCGTCGTCCACGGGGGCGATCTCGTCGACGACGCCGACGAGCCGGA
TGCCCGCCCCGACACGACCGCCGCCGCGCTCGGCGTGCTCGACGCCCTGC
CGGTCCGCTGGTTCCTGCTGAACGGCAACCACGATCGGCGCGCCTTCCTG
ACGGCGGAGTCGGTCGACGCCGCCGGCACCCGTCCGAGCGGTCTCGGCGA
GGTGCCGACGACGGACGCGACCGGTGTCGCCGCTCGTCTCGCGGGCGCCG
CGCAGCTCCTGTTCGTCGACGCCAACCCGGAGCGGGGCGAGCGGGCGCAG
CTCGAGGGAGTCATCCCGCTCGATGCGATCGCGTCCGTCGCTCGCCGCAT
CGACGCCCACTCCGGCCGATCGCTCGTCTTCCTGCACTACCCGCCGCTGC
GTCAGGAAGCGGCCTGGTCCGGCGCGCCGAGTGGTGGCGAGGCGCTGCAC
GCCGTGCTCGCGGCGCGGTCGGATCGGCTTCACGGTGTCTTCGTCGCGCA
CAACCACCGGAGCCTCCACCACGTCCGCGACGGCGTCCTCTACGCGACGG
CACCGGCGCTGAGCCGCTCGCTTCTGCTCTGGCCCGATCAGGCGACGCTC
GCCTTCGACGACGAACCGGTGCTCGGCCTGCACTACGTGACGCTCGGGGC
GGACGGCTCGACCCGCGTGCAGCACCATGCCTTC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101870:120..953- >mRNA_P-canaliculata_contig101870.272.1 ID=mRNA_P-canaliculata_contig101870.272.1|Name=mRNA_P-canaliculata_contig101870.272.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at P-canaliculata_contig101870:120..953- (Pelvetia canaliculata dioecious)
ATGACGTCGACCGTGACCGATGGCGCCCTGCATTTCGTCCACCTCGCCGA
CAGCCACGTCGCGTCCGGCGACACCCGGGGCGTCGATCTCGTGCGGCTCG
AGGGCGTCGTCGAGCGGCTGCGCGATCTGCACGCGCGCGGCGTCCCGATC
GACTTCGTCGTCCACGGGGGCGATCTCGTCGACGACGCCGACGAGCCGGA
TGCCCGCCCCGACACGACCGCCGCCGCGCTCGGCGTGCTCGACGCCCTGC
CGGTCCGCTGGTTCCTGCTGAACGGCAACCACGATCGGCGCGCCTTCCTG
ACGGCGGAGTCGGTCGACGCCGCCGGCACCCGTCCGAGCGGTCTCGGCGA
GGTGCCGACGACGGACGCGACCGGTGTCGCCGCTCGTCTCGCGGGCGCCG
CGCAGCTCCTGTTCGTCGACGCCAACCCGGAGCGGGGCGAGCGGGCGCAG
CTCGAGGGAGTCATCCCGCTCGATGCGATCGCGTCCGTCGCTCGCCGCAT
CGACGCCCACTCCGGCCGATCGCTCGTCTTCCTGCACTACCCGCCGCTGC
GTCAGGAAGCGGCCTGGTCCGGCGCGCCGAGTGGTGGCGAGGCGCTGCAC
GCCGTGCTCGCGGCGCGGTCGGATCGGCTTCACGGTGTCTTCGTCGCGCA
CAACCACCGGAGCCTCCACCACGTCCGCGACGGCGTCCTCTACGCGACGG
CACCGGCGCTGAGCCGCTCGCTTCTGCTCTGGCCCGATCAGGCGACGCTC
GCCTTCGACGACGAACCGGTGCTCGGCCTGCACTACGTGACGCTCGGGGC
GGACGGCTCGACCCGCGTGCAGCACCATGCCTTCATGACGTCGACCGTGA
CCGATGGCGCCCTGCATTTCGTCCACCTCGCCGACAGCCACGTCGCGTCC
GGCGACACCCGGGGCGTCGATCTCGTGCGGCTCGAGGGCGTCGTCGAGCG
GCTGCGCGATCTGCACGCGCGCGGCGTCCCGATCGACTTCGTCGTCCACG
GGGGCGATCTCGTCGACGACGCCGACGAGCCGGATGCCCGCCCCGACACG
ACCGCCGCCGCGCTCGGCGTGCTCGACGCCCTGCCGGTCCGCTGGTTCCT
GCTGAACGGCAACCACGATCGGCGCGCCTTCCTGACGGCGGAGTCGGTCG
ACGCCGCCGGCACCCGTCCGAGCGGTCTCGGCGAGGTGCCGACGACGGAC
GCGACCGGTGTCGCCGCTCGTCTCGCGGGCGCCGCGCAGCTCCTGTTCGT
CGACGCCAACCCGGAGCGGGGCGAGCGGGCGCAGCTCGAGGGAGTCATCC
CGCTCGATGCGATCGCGTCCGTCGCTCGCCGCATCGACGCCCACTCCGGC
CGATCGCTCGTCTTCCTGCACTACCCGCCGCTGCGTCAGGAAGCGGCCTG
GTCCGGCGCGCCGAGTGGTGGCGAGGCGCTGCACGCCGTGCTCGCGGCGC
GGTCGGATCGGCTTCACGGTGTCTTCGTCGCGCACAACCACCGGAGCCTC
CACCACGTCCGCGACGGCGTCCTCTACGCGACGGCACCGGCGCTGAGCCG
CTCGCTTCTGCTCTGGCCCGATCAGGCGACGCTCGCCTTCGACGACGAAC
CGGTGCTCGGCCTGCACTACGTGACGCTCGGGGCGGACGGCTCGACCCGC
GTGCAGCACCATGCCTTC back to top
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