Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 888 |
| Cds size | 288 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815590.3863533-UTR-P-canaliculata_contig10179:5681..5933 | 1622815590.3863533-UTR-P-canaliculata_contig10179:5681..5933 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10179 5682..5933 + |
| 1693494154.0127273-UTR-P-canaliculata_contig10179:5681..5933 | 1693494154.0127273-UTR-P-canaliculata_contig10179:5681..5933 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10179 5682..5933 + |
| 1622815590.4121182-UTR-P-canaliculata_contig10179:6221..6569 | 1622815590.4121182-UTR-P-canaliculata_contig10179:6221..6569 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10179 6222..6569 + |
| 1693494154.032054-UTR-P-canaliculata_contig10179:6221..6569 | 1693494154.032054-UTR-P-canaliculata_contig10179:6221..6569 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10179 6222..6569 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815590.3978677-CDS-P-canaliculata_contig10179:5933..6221 | 1622815590.3978677-CDS-P-canaliculata_contig10179:5933..6221 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10179 5934..6221 + |
| 1693494154.0237324-CDS-P-canaliculata_contig10179:5933..6221 | 1693494154.0237324-CDS-P-canaliculata_contig10179:5933..6221 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10179 5934..6221 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10179.266.1 >prot_P-canaliculata_contig10179.266.1 ID=prot_P-canaliculata_contig10179.266.1|Name=mRNA_P-canaliculata_contig10179.266.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=96bp
MEGMVKDIFRCDEDGCSEQPNYGVAGSRMPSLCAEHVLEGMASLASKTCA
DDGCTKQQRRNSRHQEDGICHESFSGGCGPLSFQDMRQGWMLYAA* back to topmRNA from alignment at P-canaliculata_contig10179:5682..6569+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10179.266.1 ID=mRNA_P-canaliculata_contig10179.266.1|Name=mRNA_P-canaliculata_contig10179.266.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=888bp|location=Sequence derived from alignment at P-canaliculata_contig10179:5682..6569+ (Pelvetia canaliculata dioecious)
CCGAAGTACGGGGCTGAGCTCGTTTTTGAGGGGATGGTTAGCATGACGAT
AAAGATGTGTGCCAACGATGGATGCTCTAAGCAATCGGGCTTCGGAATTG
TCAGTAGCAGTGAGGCGGAGTACTGCGCCGAGCACGCTCTTGAAGGTAGA
GTTGGCGGTGTTTCAACGGGTTACGCCCGAGATGGCTGCGCTAAGTAGCC
GAGCTACGGAGCAAGTGTTAGCAAGAAACCGGAGTCCTGCGCTGTGGGCT
CAATGGAGGGGATGGTGAAGGATATCTTCAGGTGTGACGAAGATGGATGC
TCAGAGCAGCCGAACTATGGGGTTGCTGGCAGCAGGATGCCAAGTCTTTG
CGCTGAACATGTTCTTGAGGGAATGGCAAGTCTTGCTTCCAAGACGTGTG
CAGATGATGGCTGCACTAAGCAGCAGCGACGGAATAGCCGGCATCAAGAA
GATGGTATTTGTCACGAATCGTTCTCTGGAGGCTGTGGCCCGCTCTCGTT
CCAAGATATGCGGCAAGGATGGATGCTCTACGCAGCCTAGTTACGGAATA
CCCGGTAGTGAGAAGCGGGAGTAATGCGTGAAGCATGCTTTGGAGGGAAT
GGTCAACGTTCCTTCCATGCATTGTTCCAGGGATGGATGCTTCACGCAGC
CGAGCTACGGAATGCCCGGTAGCAAGAGGCTGGAGTATTGCGTCAAGCAT
GCTCTGGAGGGAATGGTAAGTGTTTCTTCCAAACATTGTTCTAGCGGTGG
ATGCTTCACGCGGCCGAGCTACGGAATGCCCGGCAAGAAGCCGGAGTACT
ACGCCAAACATTCTTTGGGGGGTATGATCCGCGTTTCCTCCAAGAGCTGC
TCCGGCTATGGATGCAGTAAGCAGCCGACTTGCGGCTT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10179:5682..6569+ >mRNA_P-canaliculata_contig10179.266.1 ID=mRNA_P-canaliculata_contig10179.266.1|Name=mRNA_P-canaliculata_contig10179.266.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at P-canaliculata_contig10179:5682..6569+ (Pelvetia canaliculata dioecious)
ATGGAGGGGATGGTGAAGGATATCTTCAGGTGTGACGAAGATGGATGCTC
AGAGCAGCCGAACTATGGGGTTGCTGGCAGCAGGATGCCAAGTCTTTGCG
CTGAACATGTTCTTGAGGGAATGGCAAGTCTTGCTTCCAAGACGTGTGCA
GATGATGGCTGCACTAAGCAGCAGCGACGGAATAGCCGGCATCAAGAAGA
TGGTATTTGTCACGAATCGTTCTCTGGAGGCTGTGGCCCGCTCTCGTTCC
AAGATATGCGGCAAGGATGGATGCTCTACGCAGCCTAGATGGAGGGGATG
GTGAAGGATATCTTCAGGTGTGACGAAGATGGATGCTCAGAGCAGCCGAA
CTATGGGGTTGCTGGCAGCAGGATGCCAAGTCTTTGCGCTGAACATGTTC
TTGAGGGAATGGCAAGTCTTGCTTCCAAGACGTGTGCAGATGATGGCTGC
ACTAAGCAGCAGCGACGGAATAGCCGGCATCAAGAAGATGGTATTTGTCA
CGAATCGTTCTCTGGAGGCTGTGGCCCGCTCTCGTTCCAAGATATGCGGC
AAGGATGGATGCTCTACGCAGCCTAG back to top
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