Homology
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
A0A353ZWR9_ARTSP (Glycosyltransferase (Fragment) n=1 Tax=Arthrobacter sp. TaxID=1667 RepID=A0A353ZWR9_ARTSP)
HSP 1 Score: 55.1 bits (131), Expect = 3.690e-8
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 16 SVGVIICAYTERRWDLLVRAIDSVLVGQGA-DDIVVVIDHNDDLLQR 153
SV ++ICAYTERRWDLL+ I+SV A ++I+VVIDHN+DL +R
Sbjct: 9 SVSIVICAYTERRWDLLLDVIESVRAQTVAPEEILVVIDHNEDLYER 55
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
UPI001F4A67A0 (glycosyltransferase n=1 Tax=Rhodococcus sp. CH91 TaxID=2910256 RepID=UPI001F4A67A0)
HSP 1 Score: 56.6 bits (135), Expect = 5.230e-8
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 1 QTVTQSVGVIICAYTERRWDLLVRAIDSVLVG-QGADDIVVVIDHNDDLLQR 153
QT+T SV +ICAYT+RRWD L RA+DSV + D+I+VVIDHN+ LL R
Sbjct: 854 QTITASV--VICAYTDRRWDSLSRAVDSVRAQIRSVDEIIVVIDHNEPLLTR 903
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
A0A378TDY6_9MYCO (Glycosyl transferase family protein n=1 Tax=Mycolicibacterium tokaiense TaxID=39695 RepID=A0A378TDY6_9MYCO)
HSP 1 Score: 56.2 bits (134), Expect = 6.820e-8
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 4 TVTQSVGVIICAYTERRWDLLVRAIDSVLVGQGA-DDIVVVIDHNDDLLQR 153
T+ +S V+IC YTE RWDLLVR++ SVLV A + ++VV+DHN DL +
Sbjct: 2 TINRSADVVICTYTEARWDLLVRSVSSVLVQSVAPEQVIVVVDHNSDLAAK 52
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
K0UN44_MYCVA (Glycosyl transferase family protein (Fragment) n=3 Tax=Mycolicibacterium vaccae TaxID=1810 RepID=K0UN44_MYCVA)
HSP 1 Score: 53.9 bits (128), Expect = 1.770e-7
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 13 QSVGVIICAYTERRWDLLVRAIDSVLVGQGAD-DIVVVIDHNDDLLQR 153
+S+ V+ICAYT RWD L R+++SVL +G +VVVIDHNDDL R
Sbjct: 24 ESLSVVICAYTTERWDDLCRSVESVLADRGPQLQVVVVIDHNDDLYVR 71
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
UPI001964A02A (Glycosyltransferase family 2 protein n=2 Tax=Nakamurella leprariae TaxID=2803911 RepID=UPI001964A02A)
HSP 1 Score: 54.3 bits (129), Expect = 3.370e-7
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 16 SVGVIICAYTERRWDLLVRAIDSVLVG-QGADDIVVVIDHNDDLLQR 153
+ V++CAYTERRWD L+ AIDSV+ + D++VVVIDHND LL+R
Sbjct: 31 TAAVVVCAYTERRWDDLLDAIDSVVPQLRTGDELVVVIDHNDVLLER 77
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
A0A5C7PW78_9BURK (Glycosyltransferase family 2 protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A5C7PW78_9BURK)
HSP 1 Score: 53.9 bits (128), Expect = 4.510e-7
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 10 TQSVGVIICAYTERRWDLLVRAIDSVLVG-QGADDIVVVIDHNDDLLQR 153
T ++ V++CAYTE RWD LV AI S+ + AD+IV+VIDH+DDLL R
Sbjct: 7 TATIAVVVCAYTEARWDELVEAISSLDTQMRPADEIVLVIDHHDDLLAR 55
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
A0A0B4DTS0_PSEPS (Glycosyltransferase n=1 Tax=Pseudarthrobacter phenanthrenivorans TaxID=361575 RepID=A0A0B4DTS0_PSEPS)
HSP 1 Score: 52.8 bits (125), Expect = 1.160e-6
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 16 SVGVIICAYTERRWDLLVRAIDSVLVGQGA-DDIVVVIDHNDDLLQR 153
SV ++ICAYTERRWDLL+ I+SV A +I+VV+DHN+DL R
Sbjct: 6 SVSIVICAYTERRWDLLLDVIESVRAQTLAPQEIIVVVDHNEDLYGR 52
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
UPI001785A6D2 (glycosyltransferase n=1 Tax=Microbacterium sp. Sa4CUA7 TaxID=2762236 RepID=UPI001785A6D2)
HSP 1 Score: 52.4 bits (124), Expect = 1.560e-6
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 16 SVGVIICAYTERRWDLLVRAIDSVLVGQGADDIVVVIDHNDDLLQR 153
SV V+ICAYT RWD LV A+ SV AD+ ++VIDHND+LL R
Sbjct: 2 SVSVVICAYTLDRWDQLVLAMASVAAQGSADETLLVIDHNDELLAR 47
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
A0A7G6WQG4_9MICC (Glycosyltransferase family 2 protein n=2 Tax=unclassified Pseudarthrobacter TaxID=2647000 RepID=A0A7G6WQG4_9MICC)
HSP 1 Score: 52.4 bits (124), Expect = 1.580e-6
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 16 SVGVIICAYTERRWDLLVRAIDSVLVGQ-GADDIVVVIDHNDDLLQR 153
+V ++ICAYT+RRWDLL+ I+SV A +I+VVIDHN++L +R
Sbjct: 5 TVSIVICAYTQRRWDLLLDVIESVRAQSVAAQEILVVIDHNEELFER 51
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Match:
A0A166PR67_9ACTN (Putative glycosyltransferase n=1 Tax=Frankia sp. EI5c TaxID=683316 RepID=A0A166PR67_9ACTN)
HSP 1 Score: 52.4 bits (124), Expect = 1.630e-6
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 16 SVGVIICAYTERRWDLLVRAIDSVL-VGQGADDIVVVIDHNDDLLQR 153
SV V+ICAYTE RW+ L RA+DS+L + AD+I+VV DHN+ L +R
Sbjct: 10 SVSVVICAYTEERWEDLRRAVDSILRQRRPADEIIVVTDHNEPLRER 56
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101582.247.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.69e-8 / Id = 59.57 Expect = 5.23e-8 / Id = 59.62 Expect = 6.82e-8 / Id = 52.94 Expect = 1.77e-7 / Id = 56.25 Expect = 3.37e-7 / Id = 59.57 Expect = 4.51e-7 / Id = 57.14 Expect = 1.16e-6 / Id = 57.45 Expect = 1.56e-6 / Id = 58.70 Expect = 1.58e-6 / Id = 53.19 Expect = 1.63e-6 / Id = 57.45 Sequence A0A353ZWR9_ARTSP UPI001F4A67A0 A0A378TDY6_9MYCO K0UN44_MYCVA UPI001964A02A A0A5C7PW78_9BURK A0A0B4DTS0_PSEPS UPI001785A6D2 A0A7G6WQG4_9MICC A0A166PR67_9ACTN Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101582.247.1
>prot_P-canaliculata_contig101582.247.1 ID=prot_P-canaliculata_contig101582.247.1|Name=mRNA_P-canaliculata_contig101582.247.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=51bp
QTVTQSVGVIICAYTERRWDLLVRAIDSVLVGQGADDIVVVIDHNDDLLQ back to top mRNA from alignment at P-canaliculata_contig101582:7..159-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig101582.247.1 ID=mRNA_P-canaliculata_contig101582.247.1|Name=mRNA_P-canaliculata_contig101582.247.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=153bp|location=Sequence derived from alignment at P-canaliculata_contig101582:7..159- (Pelvetia canaliculata dioecious)CAAACAGTGACGCAGTCGGTCGGCGTCATCATCTGTGCCTACACGGAGCG
CCGCTGGGACCTGCTGGTCCGGGCGATCGACTCCGTGCTCGTGGGGCAGG
GGGCCGACGACATCGTCGTCGTGATCGACCACAACGATGACCTGCTCCAA
CGG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101582:7..159-
>mRNA_P-canaliculata_contig101582.247.1 ID=mRNA_P-canaliculata_contig101582.247.1|Name=mRNA_P-canaliculata_contig101582.247.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=306bp|location=Sequence derived from alignment at P-canaliculata_contig101582:7..159- (Pelvetia canaliculata dioecious) back to top