Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 459 |
| Cds size | 363 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815584.8422663-CDS-P-canaliculata_contig10111:8477..8840 | 1622815584.8422663-CDS-P-canaliculata_contig10111:8477..8840 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10111 8478..8840 + |
| 1693494151.1250083-CDS-P-canaliculata_contig10111:8477..8840 | 1693494151.1250083-CDS-P-canaliculata_contig10111:8477..8840 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10111 8478..8840 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815584.8556068-UTR-P-canaliculata_contig10111:8840..8934 | 1622815584.8556068-UTR-P-canaliculata_contig10111:8840..8934 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10111 8841..8934 + |
| 1693494151.1330311-UTR-P-canaliculata_contig10111:8840..8934 | 1693494151.1330311-UTR-P-canaliculata_contig10111:8840..8934 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10111 8841..8934 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10111.201.1 >prot_P-canaliculata_contig10111.201.1 ID=prot_P-canaliculata_contig10111.201.1|Name=mRNA_P-canaliculata_contig10111.201.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=121bp
LIFGPLHLLARAGEFVFGGEAKAFETPNVFRVLSLAILLYHTCCTGATRC
SPKNNLVLSDRPSYLSVIETGGKETCVFATVSPFCQSLSLEYRSLCTRIQ
LETEKIGVHASTSTAVYSIV* back to topmRNA from alignment at P-canaliculata_contig10111:8478..8934+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10111.201.1 ID=mRNA_P-canaliculata_contig10111.201.1|Name=mRNA_P-canaliculata_contig10111.201.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=457bp|location=Sequence derived from alignment at P-canaliculata_contig10111:8478..8934+ (Pelvetia canaliculata dioecious)
TTGATCTTCGGCCCCCTGCACCTTCTTGCGCGCGCGGGCGAATTCGTTTT
CGGGGGCGAGGCGAAAGCATTTGAAACCCCGAACGTTTTTCGTGTGTTAT
CACTTGCTATCTTGCTGTATCACACTTGCTGCACTGGCGCTACTCGGTGC
AGTCCAAAGAATAATTTAGTTTTATCCGACAGGCCATCGTATTTGTCTGT
GATAGAAACGGGGGGGAAGGAAACTTGTGTCTTCGCGACCGTGTCGCCGT
TTTGCCAGTCTCTCTCTCTTGAGTATCGCTCGCTATGCACGCGGATCCAG
CTTGAAACGGAAAAAATTGGGGTTCACGCGAGTACCTCTACAGCAGTATA
CAGTATAGTATAGCATAGTAGACTACGTGCGCGACGAGGCCCGCCCTTGT
GTGTATCTACATGGAGAGGAGAGTACAGTACATGTTTTACTGTACCGCAT
CGTTGAT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10111:8478..8934+ >mRNA_P-canaliculata_contig10111.201.1 ID=mRNA_P-canaliculata_contig10111.201.1|Name=mRNA_P-canaliculata_contig10111.201.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at P-canaliculata_contig10111:8478..8934+ (Pelvetia canaliculata dioecious)
TTGATCTTCGGCCCCCTGCACCTTCTTGCGCGCGCGGGCGAATTCGTTTT
CGGGGGCGAGGCGAAAGCATTTGAAACCCCGAACGTTTTTCGTGTGTTAT
CACTTGCTATCTTGCTGTATCACACTTGCTGCACTGGCGCTACTCGGTGC
AGTCCAAAGAATAATTTAGTTTTATCCGACAGGCCATCGTATTTGTCTGT
GATAGAAACGGGGGGGAAGGAAACTTGTGTCTTCGCGACCGTGTCGCCGT
TTTGCCAGTCTCTCTCTCTTGAGTATCGCTCGCTATGCACGCGGATCCAG
CTTGAAACGGAAAAAATTGGGGTTCACGCGAGTACCTCTACAGCAGTATA
CAGTATAGTATAGTTGATCTTCGGCCCCCTGCACCTTCTTGCGCGCGCGG
GCGAATTCGTTTTCGGGGGCGAGGCGAAAGCATTTGAAACCCCGAACGTT
TTTCGTGTGTTATCACTTGCTATCTTGCTGTATCACACTTGCTGCACTGG
CGCTACTCGGTGCAGTCCAAAGAATAATTTAGTTTTATCCGACAGGCCAT
CGTATTTGTCTGTGATAGAAACGGGGGGGAAGGAAACTTGTGTCTTCGCG
ACCGTGTCGCCGTTTTGCCAGTCTCTCTCTCTTGAGTATCGCTCGCTATG
CACGCGGATCCAGCTTGAAACGGAAAAAATTGGGGTTCACGCGAGTACCT
CTACAGCAGTATACAGTATAGTATAG back to top
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