mRNA_P-canaliculata_contig10111.200.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Match: D8LJ51_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 8.260e-81
Identity = 293/686 (42.71%), Postives = 349/686 (50.87%), Query Frame = 1

Query:  265 MALLGDDEGGVVPFDMTE--DGEDWFQFSLDNLEMDRGCSP-LRQEANLMEQEAIDFGDTDQDDDVDEIFHAGVSGPGPPDREDGASGRVSGSG--NIPRPGSRGSHPGVTSTREVVMNKPAKQQQQT--AARGVPIPPAKSGLEKIKSEAIEVQGAEDQSKLAAESAA-AKRNSRASRSEAKIRHRT-------AGGMAGGVGGMPGRAE-TASMSSSKDRSEGRPVGSKAMSTSTAGXXXXX------------------------APTRVNSVQNRRRLERNAREQKRSLKISQRIEDLRRMLTQFGVDVKASKSAVLSEATDYIAHLQRQQAQSEAERARLLTLLQNAKNELAARVTSVSSXXXXXXXXXXXXXXXXXXXXXXNQ---------------TMVESPTTPDARKRTLPFNSLAAXXXXXXXXXXXXXXRQMAQTAGTVEGLSGCETHPAQKSWMMEEPTETTEQQSLSAQNRQRSLLVVAGPSVPGQGSAAGLIPASGVVASGLMPTAAVPVAAAAVPLRTPVPPPALASTVVAAGEGTTEVSEATARALSHVDYEGVFRTVPLPMAIANVNGNLVDCNARLTQVTGFRREEALFLSIFDLVADAFLQHTFSMISSILSLRGVA-NPPFFQVVGKRRDGS-SAGMVRISVVQDDALRPLHFCVCVMESAAGAG 2151
            MAL GD++G V PF M E   G++WF FSLDNLEMDR C+  L+ ++  M+Q+                                           N  R   +              +  AK QQ    A +GV +   K  L+K+K EA EV  + D+ +  +E+AA AKR+SR                   AGGMAGGVGGM GR E  A  ++S D            ST T G XXXX                        + T+  +VQN+RRLERNAREQKRSLKISQRIEDLRRML+QFGVDVKASKSAVLSEATDYIAHLQRQ AQSEAERAR+L LL N++            XXXXXXXXXXXXXXXXXXXXXX                  +VE P++       L  +                            +G  G  T     +  M  P  T  QQ           +V   PS+    SA     A G      MP A    A AA                            ATARALSHV+YE VFRT+P+PMAIANVNGNLVDCN RLTQVTGFR+EEALF++IFDLVAD FLQHTFSMISSILS+RGV  NPPFFQV GK  +G+   G+V+IS V DD LRP+HFC+C+++S A  G
Sbjct:    1 MALFGDEDGDVGPFVMAEVEGGDEWFPFSLDNLEMDRACNASLQDDSRPMDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWNEDRYQQQDGXXXXXXXXXXXADSNAKVQQGRGGARKGVVVSEPKIRLDKVKPEAKEVHASHDRKRHTSEAAAPAKRSSRGEXXXXXXXXXXXXXXXXPAGGMAGGVGGMTGRVEGQAGWTTSSDTKH---------STRTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMTKAPTVQNKRRLERNAREQKRSLKISQRIEDLRRMLSQFGVDVKASKSAVLSEATDYIAHLQRQHAQSEAERARILQLLHNSRAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGGDRGAGVGVVVERPSSNTMLDTLLSLDD---------------------------DGDMGRPTSAMTAARAMVFPPPTPPQQG-------EEQIVPGFPSL----SATARRGADG------MPVAPSAAAGAAAXXXGRAXXXXXXXXXXXXXXXXXXNLAATARALSHVNYERVFRTLPMPMAIANVNGNLVDCNTRLTQVTGFRKEEALFMTIFDLVADPFLQHTFSMISSILSMRGVTGNPPFFQVPGKIFNGNPGGGVVQISAVHDDQLRPMHFCICILDSPATGG 633

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BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Match: A0A835Z815_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z815_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.340e-20
Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 1

Query: 1795 VDYEGVFRTVPLPMAIANVNGNLVDCNARLTQVTGFRREEALFLSIFDLVADAFLQHTFSMISSILSLRGVANPPFFQ------VVGKRRDGSSAGMVRISVVQDDALRPLHFCV 2121
            +DY+ +F    +P+A+ +VNGN+VDCNAR+   TG+RREE L L++F+LVADAFLQ +F++IS +L++ G A     Q      +  K RDG   G++ I++V+D+ LRP  F +
Sbjct:  188 MDYQLIFHNAAIPLAVGSVNGNIVDCNARMCAFTGYRREELLALTVFNLVADAFLQQSFALISGMLTVAGAAAAAAQQRGAHVDMPCKLRDGQPGGVLSIALVRDELLRPRFFAI 302

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BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Match: A0A835YRU1_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.540e-20
Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 1

Query: 1795 VDYEGVFRTVPLPMAIANVNGNLVDCNARLTQVTGFRREEALFLSIFDLVADAFLQHTFSMISSILSLRGVANPP--FFQVVGKRRDGSSAGMVRISVVQDDALRPLHFCV 2121
            +DY+ +F    +P+A+ ++NGN+V+CN+R+   TGFRR+E L L++F+LVADA+LQ +F++IS  LS    A  P     +  K RDG   G++ +S+V+DD +RP  F +
Sbjct:  150 MDYQLIFHNAAIPLAVCSINGNIVECNSRMCVATGFRRDELLLLTVFNLVADAYLQRSFALISGALSAPAAAGAPPQHVDLPCKVRDGRPGGVLSVSLVRDDIMRPRFFAI 260

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BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Match: A0A7S1XXW7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.620e-6
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1

Query:  979 RRRLERNAREQKRSLKISQRIEDLRRMLTQFGVDVKASKSAVLSEATDYIAHLQRQQAQSEAERARLLTLL 1191
            +RR ERN REQKRSLKIS++I++L  +LT  G  VKA+KS++L EA  YI HLQ   A+ E ER++ + +L
Sbjct:  101 KRRQERNHREQKRSLKISRKIDELHEILTDSGRMVKANKSSILREAFSYIMHLQGVLARKEYERSQFVNIL 171

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BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Match: A0A7R9U539_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U539_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.900e-6
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 1

Query:  979 RRRLERNAREQKRSLKISQRIEDLRRMLTQFGVDVKASKSAVLSEATDYIAHLQRQQAQSEAERARLLTLLQNAKNEL 1212
            RRR ERN REQ+RSLKIS++I++L  +LT  G +VK +KSA+L++A  YI +LQ   A+ E ER + + +L    N +
Sbjct:  156 RRRKERNQREQRRSLKISKKIDELHEILTGSGRNVKPNKSAILNDAHQYIQYLQSTMARKEFERNQFVDVLTMGGNNM 233

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BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Match: A0A7R9W9V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9V5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.600e-5
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 1

Query:  982 RRLERNAREQKRSLKISQRIEDLRRMLTQFGVDV-KASKSAVLSEATDYIAHLQRQQAQSEAERARLLTLLQ 1194
            +R ERNARE++RS +IS++I +LR +L+  GV V K +KSAVL+EA +YI  LQ+ Q +SE +R  L+  +Q
Sbjct:   41 KREERNAREKERSFRISRQINELRNLLSSGGVIVPKGTKSAVLTEAANYIRMLQQHQYRSEIDRQHLVQQMQ 112

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig10111.200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
D8LJ51_ECTSI	8.260e-81	42.71	N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECT...	[more]
A0A835Z815_9STRA	1.340e-20	44.35	BHLH domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A835YRU1_9STRA	1.540e-20	42.34	BHLH domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7S1XXW7_9STRA	1.620e-6	53.52	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7R9U539_9STRA	7.900e-6	47.44	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7R9W9V5_9STRA	2.600e-5	50.00	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]