Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 438 |
| Cds size | 255 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815584.0960896-UTR-P-canaliculata_contig101066:372..555 | 1622815584.0960896-UTR-P-canaliculata_contig101066:372..555 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101066 373..555 + |
| 1693494150.6935916-UTR-P-canaliculata_contig101066:372..555 | 1693494150.6935916-UTR-P-canaliculata_contig101066:372..555 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101066 373..555 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815584.1063838-CDS-P-canaliculata_contig101066:555..810 | 1622815584.1063838-CDS-P-canaliculata_contig101066:555..810 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101066 556..810 + |
| 1693494150.7101448-CDS-P-canaliculata_contig101066:555..810 | 1693494150.7101448-CDS-P-canaliculata_contig101066:555..810 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101066 556..810 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101066.192.1 >prot_P-canaliculata_contig101066.192.1 ID=prot_P-canaliculata_contig101066.192.1|Name=mRNA_P-canaliculata_contig101066.192.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=85bp
MFVGMLLRTDNHAATRSTLYSVRQDGSENEIDDEAVSVRVQHSYSLEDKV
DMYPWKHVAEPHRKTVMQVTSWPDDAREEDVEFR* back to topmRNA from alignment at P-canaliculata_contig101066:373..810+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101066.192.1 ID=mRNA_P-canaliculata_contig101066.192.1|Name=mRNA_P-canaliculata_contig101066.192.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=438bp|location=Sequence derived from alignment at P-canaliculata_contig101066:373..810+ (Pelvetia canaliculata dioecious)
AAGATGTTGGAAGAAAGGGATTTTCCGGACAGAACCCAAAGTTATTCCAT
GTCATCAATATTATCTGGTCATCTCTTCAGTCCCAGACCGTCAGACAAGG
GCAATTCAAGTCACTGCATGATGCGCCGGAAGGCGTCATGGAGGTCCATC
GCCGCTGTGGCGAGTGTGTACGCTTTGACATGAATGTTTGTTGGGATGCT
GCTAAGAACCGATAACCACGCTGCGACACGTTCAACGCTGTACTCTGTTC
GACAAGATGGTTCTGAGAATGAAATTGACGACGAAGCAGTTAGTGTACGA
GTCCAGCATTCCTACAGTTTGGAAGACAAGGTCGATATGTATCCTTGGAA
GCATGTGGCAGAGCCGCACAGAAAGACTGTTATGCAGGTGACGAGCTGGC
CCGATGATGCACGCGAGGAAGACGTTGAATTCAGGTGA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101066:373..810+ >mRNA_P-canaliculata_contig101066.192.1 ID=mRNA_P-canaliculata_contig101066.192.1|Name=mRNA_P-canaliculata_contig101066.192.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at P-canaliculata_contig101066:373..810+ (Pelvetia canaliculata dioecious)
ATGTTTGTTGGGATGCTGCTAAGAACCGATAACCACGCTGCGACACGTTC
AACGCTGTACTCTGTTCGACAAGATGGTTCTGAGAATGAAATTGACGACG
AAGCAGTTAGTGTACGAGTCCAGCATTCCTACAGTTTGGAAGACAAGGTC
GATATGTATCCTTGGAAGCATGTGGCAGAGCCGCACAGAAAGACTGTTAT
GCAGGTGACGAGCTGGCCCGATGATGCACGCGAGGAAGACGTTGAATTCA
GGTGAATGTTTGTTGGGATGCTGCTAAGAACCGATAACCACGCTGCGACA
CGTTCAACGCTGTACTCTGTTCGACAAGATGGTTCTGAGAATGAAATTGA
CGACGAAGCAGTTAGTGTACGAGTCCAGCATTCCTACAGTTTGGAAGACA
AGGTCGATATGTATCCTTGGAAGCATGTGGCAGAGCCGCACAGAAAGACT
GTTATGCAGGTGACGAGCTGGCCCGATGATGCACGCGAGGAAGACGTTGA
ATTCAGGTGA back to top
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