Homology
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
D7FIK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK7_ECTSI)
HSP 1 Score: 65.1 bits (157), Expect = 5.840e-11
Identity = 29/32 (90.62%), Postives = 32/32 (100.00%), Query Frame = 1
Query: 46 GGEWRKALHLLLRMINSGVKPDTIAYNASISA 141
GGEWRKALHLLL+MINSG++PDTIAYNASISA
Sbjct: 669 GGEWRKALHLLLKMINSGIEPDTIAYNASISA 700
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A4D9DB36_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB36_9STRA)
HSP 1 Score: 54.7 bits (130), Expect = 2.720e-7
Identity = 22/37 (59.46%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 1 PNVVCYSSAITACEKGGEWRKALHLLLRMINSGVKPD 111
PN+VCY+S ITA ++G +W+KALHLL+ M++SG PD
Sbjct: 591 PNLVCYTSVITALQQGQQWQKALHLLVHMLSSGPVPD 627
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A7S2F2N3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2N3_9STRA)
HSP 1 Score: 50.4 bits (119), Expect = 8.490e-6
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 1 PNVVCYSSAITACEKGGEWRKALHLLLRMINSGVKPD 111
PNV CY++A++AC KGG WRKA+ LL +M GV+ D
Sbjct: 216 PNVDCYNAALSACTKGGHWRKAMGLLAQMKRQGVERD 252
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A7S1Z2D6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2D6_TRICV)
HSP 1 Score: 50.1 bits (118), Expect = 8.550e-6
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 25 AITACEKGGEWRKALHLLLRMINSGVKPDTIAYNAS 132
AI+ACEKGG+W KAL LL M N +KPD I+Y+A+
Sbjct: 1 AISACEKGGKWEKALDLLQDMQNYNIKPDVISYSAA 36
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A813G6D6_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G6D6_POLGL)
HSP 1 Score: 50.1 bits (118), Expect = 1.170e-5
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 1 PNVVCYSSAITACEKGGEWRKALHLLLRMINS-GVKPDTIA 120
PN VCY+SAI+ACEKGG+W+ AL LLL+ + S ++PD +
Sbjct: 5 PNEVCYNSAISACEKGGQWQLALELLLKEMPSIRLQPDAFS 45
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
W7U458_9STRA (Pentatricopeptide repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U458_9STRA)
HSP 1 Score: 50.1 bits (118), Expect = 1.170e-5
Identity = 20/33 (60.61%), Postives = 29/33 (87.88%), Query Frame = 1
Query: 1 PNVVCYSSAITACEKGGEWRKALHLLLRMINSG 99
PN+VCY+S ITA ++G +W+KALHLL+ M++SG
Sbjct: 903 PNLVCYTSVITALQQGQQWQKALHLLVYMLSSG 935
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A7S2AIS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIS8_9STRA)
HSP 1 Score: 48.1 bits (113), Expect = 3.830e-5
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 22 SAITACEKGGEWRKALHLLLRMINSGVKPDTIAYNAS 132
+AI+ACEKGG+W KAL LL +M GV P+ I++N++
Sbjct: 1 AAISACEKGGQWEKALELLRKMQERGVTPNRISFNSA 37
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A812LNB7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LNB7_9DINO)
HSP 1 Score: 48.1 bits (113), Expect = 5.470e-5
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 1
Query: 19 SSAITACEKGGEWRKALHLLLRMINSGVKPDTIAYNA 129
++ I+ACEK GEWR ALHLL +M V PD I++NA
Sbjct: 43 AARISACEKSGEWRMALHLLSKMPTGRVVPDVISFNA 79
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A7S4V7M8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V7M8_9DINO)
HSP 1 Score: 48.1 bits (113), Expect = 5.540e-5
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 16 YSSAITACEKGGEWRKALHLLLRMINSGVKPDTIAYN 126
+++AI+ACEKGGEW+KA+ LL M S + PD I Y+
Sbjct: 2 FNAAISACEKGGEWQKAVALLAEMRRSALDPDAIVYS 38
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Match:
A0A812FZ19_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812FZ19_9DINO)
HSP 1 Score: 48.1 bits (113), Expect = 5.630e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 1
Query: 16 YSSAITACEKGGEWRKALHLLLRMINSGVKPDTIA 120
YS+ I+ACEKGG+W+KAL LL M SGV P+ I+
Sbjct: 173 YSAGISACEKGGQWQKALDLLAEMPESGVTPNIIS 207
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100939.180.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 12
0 1 Expect = 5.84e-11 / Id = 90.63 Expect = 2.72e-7 / Id = 59.46 Expect = 8.49e-6 / Id = 56.76 Expect = 8.55e-6 / Id = 61.11 Expect = 1.17e-5 / Id = 56.10 Expect = 1.17e-5 / Id = 60.61 Expect = 3.83e-5 / Id = 54.05 Expect = 5.47e-5 / Id = 56.76 Expect = 5.54e-5 / Id = 54.05 Expect = 5.63e-5 / Id = 60.00 Sequence D7FIK7_ECTSI A0A4D9DB36_9STRA A0A7S2F2N3_9STRA A0A7S1Z2D6_TRICV A0A813G6D6_POLGL W7U458_9STRA A0A7S2AIS8_9STRA A0A812LNB7_9DINO A0A7S4V7M8_9DINO A0A812FZ19_9DINO Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100939.180.1
>prot_P-canaliculata_contig100939.180.1 ID=prot_P-canaliculata_contig100939.180.1|Name=mRNA_P-canaliculata_contig100939.180.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=53bp
PNVVCYSSAITACEKGGEWRKALHLLLRMINSGVKPDTIAYNASISARWT back to top mRNA from alignment at P-canaliculata_contig100939:767..925-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100939.180.1 ID=mRNA_P-canaliculata_contig100939.180.1|Name=mRNA_P-canaliculata_contig100939.180.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=159bp|location=Sequence derived from alignment at P-canaliculata_contig100939:767..925- (Pelvetia canaliculata dioecious)CCCAACGTGGTGTGCTATAGCTCCGCGATCACCGCGTGTGAGAAGGGCGG
CGAGTGGCGTAAAGCCCTCCATCTGCTCCTGAGGATGATCAACTCCGGGG
TGAAGCCCGACACCATCGCCTACAACGCGTCCATCAGCGCTAGGTGGACA
AAAAACTGA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100939:767..925-
>mRNA_P-canaliculata_contig100939.180.1 ID=mRNA_P-canaliculata_contig100939.180.1|Name=mRNA_P-canaliculata_contig100939.180.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=318bp|location=Sequence derived from alignment at P-canaliculata_contig100939:767..925- (Pelvetia canaliculata dioecious) back to top