Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 342 |
| Cds size | 342 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.374854-CDS-P-canaliculata_contig100934:258..600 | 1622815583.374854-CDS-P-canaliculata_contig100934:258..600 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100934 259..600 - |
| 1693494150.3238964-CDS-P-canaliculata_contig100934:258..600 | 1693494150.3238964-CDS-P-canaliculata_contig100934:258..600 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100934 259..600 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100934.179.1 >prot_P-canaliculata_contig100934.179.1 ID=prot_P-canaliculata_contig100934.179.1|Name=mRNA_P-canaliculata_contig100934.179.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=114bp
MHLDVAANSRTINAIAPVSVTDPVESDPMEIRHFRTALFTVLAGAGAGDV
TFDVLEADTAGGTYTQVSGLQTVKAGLAPGSKTLFQLDASTRKPFVKVSV
EASSDTVLAVSALL back to topmRNA from alignment at P-canaliculata_contig100934:259..600- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100934.179.1 ID=mRNA_P-canaliculata_contig100934.179.1|Name=mRNA_P-canaliculata_contig100934.179.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=342bp|location=Sequence derived from alignment at P-canaliculata_contig100934:259..600- (Pelvetia canaliculata dioecious)
ATGCATCTCGACGTAGCAGCCAACAGCCGCACCATCAACGCAATCGCCCC
CGTCTCCGTGACGGACCCGGTCGAGAGCGATCCGATGGAGATCCGGCACT
TTCGAACGGCCCTCTTCACCGTGCTCGCAGGAGCGGGCGCCGGCGATGTG
ACCTTCGACGTCCTTGAGGCCGACACGGCCGGCGGGACGTATACCCAGGT
CTCGGGTCTCCAGACGGTGAAAGCTGGTCTGGCTCCGGGTTCCAAGACCC
TCTTCCAGCTCGACGCCTCGACCCGCAAGCCTTTCGTGAAGGTCTCGGTC
GAGGCTTCGTCCGACACGGTTCTTGCCGTGAGCGCCCTCCTT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100934:259..600- >mRNA_P-canaliculata_contig100934.179.1 ID=mRNA_P-canaliculata_contig100934.179.1|Name=mRNA_P-canaliculata_contig100934.179.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at P-canaliculata_contig100934:259..600- (Pelvetia canaliculata dioecious)
ATGCATCTCGACGTAGCAGCCAACAGCCGCACCATCAACGCAATCGCCCC
CGTCTCCGTGACGGACCCGGTCGAGAGCGATCCGATGGAGATCCGGCACT
TTCGAACGGCCCTCTTCACCGTGCTCGCAGGAGCGGGCGCCGGCGATGTG
ACCTTCGACGTCCTTGAGGCCGACACGGCCGGCGGGACGTATACCCAGGT
CTCGGGTCTCCAGACGGTGAAAGCTGGTCTGGCTCCGGGTTCCAAGACCC
TCTTCCAGCTCGACGCCTCGACCCGCAAGCCTTTCGTGAAGGTCTCGGTC
GAGGCTTCGTCCGACACGGTTCTTGCCGTGAGCGCCCTCCTTATGCATCT
CGACGTAGCAGCCAACAGCCGCACCATCAACGCAATCGCCCCCGTCTCCG
TGACGGACCCGGTCGAGAGCGATCCGATGGAGATCCGGCACTTTCGAACG
GCCCTCTTCACCGTGCTCGCAGGAGCGGGCGCCGGCGATGTGACCTTCGA
CGTCCTTGAGGCCGACACGGCCGGCGGGACGTATACCCAGGTCTCGGGTC
TCCAGACGGTGAAAGCTGGTCTGGCTCCGGGTTCCAAGACCCTCTTCCAG
CTCGACGCCTCGACCCGCAAGCCTTTCGTGAAGGTCTCGGTCGAGGCTTC
GTCCGACACGGTTCTTGCCGTGAGCGCCCTCCTT back to top
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