Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 600 |
| Cds size | 600 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815582.2935524-CDS-P-canaliculata_contig100876:245..845 | 1622815582.2935524-CDS-P-canaliculata_contig100876:245..845 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100876 246..845 + |
| 1693494149.6919334-CDS-P-canaliculata_contig100876:245..845 | 1693494149.6919334-CDS-P-canaliculata_contig100876:245..845 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100876 246..845 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100876.164.1 >prot_P-canaliculata_contig100876.164.1 ID=prot_P-canaliculata_contig100876.164.1|Name=mRNA_P-canaliculata_contig100876.164.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=200bp
MLSVLGSRISSGKVESTLGHIDSLPDGKVKALARRNIVSAWQDFDFGAVS
QWASAIDDPELRAKTINSIVSHTDGKDGVKAAEFISSLEGEEQQKAIWNF
GGQVRFDEPGLYMDVAAKYKDGGLNSASLGFIGAEIASNDPDYAIALAQR
IPPGKTRRRVFGDIAEHWARSEPFTAAEWASSIKDPKDREAALSNLKEK* back to topmRNA from alignment at P-canaliculata_contig100876:246..845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100876.164.1 ID=mRNA_P-canaliculata_contig100876.164.1|Name=mRNA_P-canaliculata_contig100876.164.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=600bp|location=Sequence derived from alignment at P-canaliculata_contig100876:246..845+ (Pelvetia canaliculata dioecious)
ATGCTGAGTGTTCTGGGCTCAAGAATCAGTTCTGGAAAAGTTGAATCAAC
ACTGGGGCATATTGATTCTCTTCCTGATGGAAAAGTTAAGGCGCTTGCTC
GCAGAAATATTGTCAGCGCTTGGCAAGATTTCGATTTTGGTGCTGTCAGT
CAATGGGCATCAGCGATCGATGATCCTGAGCTGCGAGCTAAAACAATCAA
TAGTATCGTTAGTCACACAGATGGGAAAGATGGGGTGAAAGCTGCTGAAT
TTATCTCTTCTCTCGAGGGTGAAGAGCAGCAAAAAGCAATCTGGAATTTT
GGAGGACAGGTAAGGTTCGATGAGCCTGGCCTCTACATGGATGTTGCTGC
AAAGTATAAGGACGGGGGTCTTAACTCTGCGAGTCTTGGTTTTATTGGAG
CCGAGATAGCGTCCAACGATCCTGACTATGCAATCGCCCTCGCCCAACGC
ATACCGCCTGGGAAGACTCGCCGTCGCGTCTTCGGTGATATCGCAGAGCA
CTGGGCAAGGTCCGAGCCATTTACCGCTGCGGAATGGGCTTCCTCAATCA
AGGATCCTAAGGACCGGGAAGCTGCTTTGAGCAATCTTAAGGAGAAATGA
back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100876:246..845+ >mRNA_P-canaliculata_contig100876.164.1 ID=mRNA_P-canaliculata_contig100876.164.1|Name=mRNA_P-canaliculata_contig100876.164.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at P-canaliculata_contig100876:246..845+ (Pelvetia canaliculata dioecious)
ATGCTGAGTGTTCTGGGCTCAAGAATCAGTTCTGGAAAAGTTGAATCAAC
ACTGGGGCATATTGATTCTCTTCCTGATGGAAAAGTTAAGGCGCTTGCTC
GCAGAAATATTGTCAGCGCTTGGCAAGATTTCGATTTTGGTGCTGTCAGT
CAATGGGCATCAGCGATCGATGATCCTGAGCTGCGAGCTAAAACAATCAA
TAGTATCGTTAGTCACACAGATGGGAAAGATGGGGTGAAAGCTGCTGAAT
TTATCTCTTCTCTCGAGGGTGAAGAGCAGCAAAAAGCAATCTGGAATTTT
GGAGGACAGGTAAGGTTCGATGAGCCTGGCCTCTACATGGATGTTGCTGC
AAAGTATAAGGACGGGGGTCTTAACTCTGCGAGTCTTGGTTTTATTGGAG
CCGAGATAGCGTCCAACGATCCTGACTATGCAATCGCCCTCGCCCAACGC
ATACCGCCTGGGAAGACTCGCCGTCGCGTCTTCGGTGATATCGCAGAGCA
CTGGGCAAGGTCCGAGCCATTTACCGCTGCGGAATGGGCTTCCTCAATCA
AGGATCCTAAGGACCGGGAAGCTGCTTTGAGCAATCTTAAGGAGAAATGA
ATGCTGAGTGTTCTGGGCTCAAGAATCAGTTCTGGAAAAGTTGAATCAAC
ACTGGGGCATATTGATTCTCTTCCTGATGGAAAAGTTAAGGCGCTTGCTC
GCAGAAATATTGTCAGCGCTTGGCAAGATTTCGATTTTGGTGCTGTCAGT
CAATGGGCATCAGCGATCGATGATCCTGAGCTGCGAGCTAAAACAATCAA
TAGTATCGTTAGTCACACAGATGGGAAAGATGGGGTGAAAGCTGCTGAAT
TTATCTCTTCTCTCGAGGGTGAAGAGCAGCAAAAAGCAATCTGGAATTTT
GGAGGACAGGTAAGGTTCGATGAGCCTGGCCTCTACATGGATGTTGCTGC
AAAGTATAAGGACGGGGGTCTTAACTCTGCGAGTCTTGGTTTTATTGGAG
CCGAGATAGCGTCCAACGATCCTGACTATGCAATCGCCCTCGCCCAACGC
ATACCGCCTGGGAAGACTCGCCGTCGCGTCTTCGGTGATATCGCAGAGCA
CTGGGCAAGGTCCGAGCCATTTACCGCTGCGGAATGGGCTTCCTCAATCA
AGGATCCTAAGGACCGGGAAGCTGCTTTGAGCAATCTTAAGGAGAAATGA back to top
|