Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 495 |
| Cds size | 495 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.9367352-CDS-P-canaliculata_contig100812:26..521 | 1622815581.9367352-CDS-P-canaliculata_contig100812:26..521 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100812 27..521 + |
| 1693494149.5121717-CDS-P-canaliculata_contig100812:26..521 | 1693494149.5121717-CDS-P-canaliculata_contig100812:26..521 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100812 27..521 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100812.160.1 >prot_P-canaliculata_contig100812.160.1 ID=prot_P-canaliculata_contig100812.160.1|Name=mRNA_P-canaliculata_contig100812.160.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=165bp
ILWLGILCFFLSCSSDYERTVSFTLELPKVPEEYRDTYTNEDFEINIYET
IEDWTLDRNPIYTNNFDATGEMVIEESFVETLPYYYMDISTPDNVLSNWV
YKGFSVVLPTIKLEGNVNRVMRAIKLTESKKFIGDWKFVSEPFSNNDKAE
NYIGFTVSKDFMVTT back to topmRNA from alignment at P-canaliculata_contig100812:27..521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100812.160.1 ID=mRNA_P-canaliculata_contig100812.160.1|Name=mRNA_P-canaliculata_contig100812.160.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=495bp|location=Sequence derived from alignment at P-canaliculata_contig100812:27..521+ (Pelvetia canaliculata dioecious)
ATATTGTGGTTGGGGATCCTGTGCTTTTTCCTTTCCTGTAGCAGTGATTA
TGAACGGACAGTCTCATTTACCCTGGAACTTCCAAAAGTGCCGGAAGAAT
ATCGGGATACCTATACCAATGAAGATTTTGAAATTAACATCTACGAAACC
ATTGAGGACTGGACGTTGGACCGTAACCCCATTTATACCAATAATTTCGA
TGCCACGGGGGAAATGGTAATAGAAGAAAGCTTCGTCGAAACATTGCCCT
ATTATTATATGGATATTTCTACCCCGGACAATGTACTTAGCAATTGGGTA
TACAAAGGGTTTTCAGTTGTATTGCCCACCATAAAACTTGAAGGGAATGT
CAATAGAGTTATGAGGGCAATAAAACTGACGGAATCCAAAAAATTTATTG
GGGACTGGAAATTTGTATCTGAGCCATTTTCAAACAACGACAAGGCCGAA
AATTATATAGGGTTTACCGTCTCCAAGGATTTTATGGTCACTACC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100812:27..521+ >mRNA_P-canaliculata_contig100812.160.1 ID=mRNA_P-canaliculata_contig100812.160.1|Name=mRNA_P-canaliculata_contig100812.160.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=990bp|location=Sequence derived from alignment at P-canaliculata_contig100812:27..521+ (Pelvetia canaliculata dioecious)
ATATTGTGGTTGGGGATCCTGTGCTTTTTCCTTTCCTGTAGCAGTGATTA
TGAACGGACAGTCTCATTTACCCTGGAACTTCCAAAAGTGCCGGAAGAAT
ATCGGGATACCTATACCAATGAAGATTTTGAAATTAACATCTACGAAACC
ATTGAGGACTGGACGTTGGACCGTAACCCCATTTATACCAATAATTTCGA
TGCCACGGGGGAAATGGTAATAGAAGAAAGCTTCGTCGAAACATTGCCCT
ATTATTATATGGATATTTCTACCCCGGACAATGTACTTAGCAATTGGGTA
TACAAAGGGTTTTCAGTTGTATTGCCCACCATAAAACTTGAAGGGAATGT
CAATAGAGTTATGAGGGCAATAAAACTGACGGAATCCAAAAAATTTATTG
GGGACTGGAAATTTGTATCTGAGCCATTTTCAAACAACGACAAGGCCGAA
AATTATATAGGGTTTACCGTCTCCAAGGATTTTATGGTCACTACCATATT
GTGGTTGGGGATCCTGTGCTTTTTCCTTTCCTGTAGCAGTGATTATGAAC
GGACAGTCTCATTTACCCTGGAACTTCCAAAAGTGCCGGAAGAATATCGG
GATACCTATACCAATGAAGATTTTGAAATTAACATCTACGAAACCATTGA
GGACTGGACGTTGGACCGTAACCCCATTTATACCAATAATTTCGATGCCA
CGGGGGAAATGGTAATAGAAGAAAGCTTCGTCGAAACATTGCCCTATTAT
TATATGGATATTTCTACCCCGGACAATGTACTTAGCAATTGGGTATACAA
AGGGTTTTCAGTTGTATTGCCCACCATAAAACTTGAAGGGAATGTCAATA
GAGTTATGAGGGCAATAAAACTGACGGAATCCAAAAAATTTATTGGGGAC
TGGAAATTTGTATCTGAGCCATTTTCAAACAACGACAAGGCCGAAAATTA
TATAGGGTTTACCGTCTCCAAGGATTTTATGGTCACTACC back to top
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