Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 408 |
| Cds size | 408 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.8539174-CDS-P-canaliculata_contig100802:420..828 | 1622815581.8539174-CDS-P-canaliculata_contig100802:420..828 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100802 421..828 - |
| 1693494149.4969635-CDS-P-canaliculata_contig100802:420..828 | 1693494149.4969635-CDS-P-canaliculata_contig100802:420..828 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100802 421..828 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100802.158.1 >prot_P-canaliculata_contig100802.158.1 ID=prot_P-canaliculata_contig100802.158.1|Name=mRNA_P-canaliculata_contig100802.158.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=136bp
MFNERLEEELSEWMDGDGDRQLSRLAAESESEFRFAANQLFIHGMLEELN
ETPAARERRIQNVLNHFSVPWKDDELAATVGKGVSRRRSLWLLISTAASI
FFLANVAWFVFGPSEAEAAINRTIRSLQNSKTWTYD back to topmRNA from alignment at P-canaliculata_contig100802:421..828- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100802.158.1 ID=mRNA_P-canaliculata_contig100802.158.1|Name=mRNA_P-canaliculata_contig100802.158.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=408bp|location=Sequence derived from alignment at P-canaliculata_contig100802:421..828- (Pelvetia canaliculata dioecious)
ATGTTCAACGAACGCCTTGAGGAGGAGCTTTCTGAATGGATGGACGGTGA
CGGCGATCGCCAGCTTTCTCGCTTAGCTGCCGAATCGGAATCAGAGTTCC
GATTCGCGGCGAACCAACTATTCATTCACGGGATGCTCGAGGAGCTCAAC
GAAACGCCTGCCGCTCGCGAGCGACGAATTCAAAATGTCCTGAATCACTT
CTCTGTACCGTGGAAGGATGACGAACTGGCAGCAACAGTCGGAAAAGGAG
TTTCTCGACGGCGCAGTCTTTGGTTGCTTATTTCAACAGCAGCTTCGATT
TTTTTTCTGGCAAACGTTGCATGGTTCGTGTTTGGGCCCTCGGAGGCGGA
AGCTGCGATCAATCGTACGATTCGTTCATTGCAAAACTCCAAAACGTGGA
CTTACGAC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100802:421..828- >mRNA_P-canaliculata_contig100802.158.1 ID=mRNA_P-canaliculata_contig100802.158.1|Name=mRNA_P-canaliculata_contig100802.158.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at P-canaliculata_contig100802:421..828- (Pelvetia canaliculata dioecious)
ATGTTCAACGAACGCCTTGAGGAGGAGCTTTCTGAATGGATGGACGGTGA
CGGCGATCGCCAGCTTTCTCGCTTAGCTGCCGAATCGGAATCAGAGTTCC
GATTCGCGGCGAACCAACTATTCATTCACGGGATGCTCGAGGAGCTCAAC
GAAACGCCTGCCGCTCGCGAGCGACGAATTCAAAATGTCCTGAATCACTT
CTCTGTACCGTGGAAGGATGACGAACTGGCAGCAACAGTCGGAAAAGGAG
TTTCTCGACGGCGCAGTCTTTGGTTGCTTATTTCAACAGCAGCTTCGATT
TTTTTTCTGGCAAACGTTGCATGGTTCGTGTTTGGGCCCTCGGAGGCGGA
AGCTGCGATCAATCGTACGATTCGTTCATTGCAAAACTCCAAAACGTGGA
CTTACGACATGTTCAACGAACGCCTTGAGGAGGAGCTTTCTGAATGGATG
GACGGTGACGGCGATCGCCAGCTTTCTCGCTTAGCTGCCGAATCGGAATC
AGAGTTCCGATTCGCGGCGAACCAACTATTCATTCACGGGATGCTCGAGG
AGCTCAACGAAACGCCTGCCGCTCGCGAGCGACGAATTCAAAATGTCCTG
AATCACTTCTCTGTACCGTGGAAGGATGACGAACTGGCAGCAACAGTCGG
AAAAGGAGTTTCTCGACGGCGCAGTCTTTGGTTGCTTATTTCAACAGCAG
CTTCGATTTTTTTTCTGGCAAACGTTGCATGGTTCGTGTTTGGGCCCTCG
GAGGCGGAAGCTGCGATCAATCGTACGATTCGTTCATTGCAAAACTCCAA
AACGTGGACTTACGAC back to top
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