Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 364 |
| Cds size | 279 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.4653292-UTR-P-canaliculata_contig10076:37..121 | 1622815581.4653292-UTR-P-canaliculata_contig10076:37..121 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10076 38..121 + |
| 1693494149.3583028-UTR-P-canaliculata_contig10076:37..121 | 1693494149.3583028-UTR-P-canaliculata_contig10076:37..121 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10076 38..121 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.47829-CDS-P-canaliculata_contig10076:121..319 | 1622815581.47829-CDS-P-canaliculata_contig10076:121..319 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10076 122..319 + |
| 1693494149.3671749-CDS-P-canaliculata_contig10076:121..319 | 1693494149.3671749-CDS-P-canaliculata_contig10076:121..319 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10076 122..319 + |
| 1622815581.4904299-CDS-P-canaliculata_contig10076:1135..1216 | 1622815581.4904299-CDS-P-canaliculata_contig10076:1135..1216 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10076 1136..1216 + |
| 1693494149.3767369-CDS-P-canaliculata_contig10076:1135..1216 | 1693494149.3767369-CDS-P-canaliculata_contig10076:1135..1216 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10076 1136..1216 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10076.151.1 >prot_P-canaliculata_contig10076.151.1 ID=prot_P-canaliculata_contig10076.151.1|Name=mRNA_P-canaliculata_contig10076.151.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=93bp
MQTDLALFSPDSWGFHTMHVGFWRFVQAQSSRATSVTAESILYRAAGTLR
AGANASKYSSYPVRWKHLISDSLCQQKLMEMQLLLEALFAKNA back to topmRNA from alignment at P-canaliculata_contig10076:38..1216+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10076.151.1 ID=mRNA_P-canaliculata_contig10076.151.1|Name=mRNA_P-canaliculata_contig10076.151.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1179bp|location=Sequence derived from alignment at P-canaliculata_contig10076:38..1216+ (Pelvetia canaliculata dioecious)
ACGGAATCTGTCATCAAACATATTCTATGAACAGATTATATCTGAACGTT
AAGACAGGGCCTGAACGGACCTATATAGGTCCGTATGCAAACGGACCTCG
CTTTATTTAGCCCCGATTCCTGGGGTTTTCATACGATGCATGTTGGTTTT
TGGCGGTTTGTTCAGGCGCAGTCGAGTAGAGCAACCTCGGTAACCGCAGA
GAGCATTTTGTACAGGGCAGCAGGCACCCTCAGGGCTGGAGCGAACGCAA
GCAAGTATTCATCATATCCTGTGAGGTGGAAGGTGAGTTTACTGCGAACA
ATTGGATATTAACGTGTGCGGCTAACAGCGATTTTGACATATTATTAAAA
TGTGGCGTACCCATACCCTTAGTAGGTCCGCTGCGTATGGTCCGCTGCTG
TACGGTTCGCTCGTGGTTCGGCGCTGCATGTCTTGCTGCTCGATGGTCAT
CACGCCATTAATGAATGTGTTCTCTCTGAGGTCACCGGAAGCGTGGAACT
GGTTCGATGTGGAATGTGAGTTTATGTCAACAATTGAATGCTAACGCGCG
GCCTACTGTGATTTCAAGATATTATTCAAATGTAGCCCGTACCGTACCAG
TCCGCTGCGGTGTGGTTCGCTGGTGCATTGTTCCCTCATGGTTCGGTGCT
GCATGTCTAGCTGCTCGATTGTCATCACGCCACAACTGTCTTCTTTGTGC
AGCTGCAGCTCTATTGTGTTGCTTCTGTGTTCCGATAAAAGGTTTGCCTC
TCCACAACCCGCGACCGCCGACGTTACCGCACAACCCACATACCCACTTG
GTCACCTCTGCCACTTGTTGAGAGGACGCTGAACGCAGACGCCGTCCGGG
CATGAACACCTTATCTCCAAGTTTTCAGCCGCGTGAGACACCTCAAGCCT
GAACAACCGCAGTAATATACGTAATAAACTCCGAGTGGTCTTCATTTGCG
AGCTCCCTGGCGTGCTTTTCCACCACCTCGTTTGCCGTACGGTGATCGAA
GGGTGGTCTGATCTCTCAGTAGCCCTGTCTAGGTTTTTGACTGCTTAGGT
TACGTTGCGCTCTCGCTTGCTTGCTTTCCGGGGGAAACGCGTACGCAGCA
CTTAATAAGTGACTCTCTGTGTCAGCAGAAATTGATGGAGATGCAACTCC
TGCTCGAGGCGTTGTTTGCGAAGAATGCA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10076:38..1216+ >mRNA_P-canaliculata_contig10076.151.1 ID=mRNA_P-canaliculata_contig10076.151.1|Name=mRNA_P-canaliculata_contig10076.151.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at P-canaliculata_contig10076:38..1216+ (Pelvetia canaliculata dioecious)
ATGCAAACGGACCTCGCTTTATTTAGCCCCGATTCCTGGGGTTTTCATAC
GATGCATGTTGGTTTTTGGCGGTTTGTTCAGGCGCAGTCGAGTAGAGCAA
CCTCGGTAACCGCAGAGAGCATTTTGTACAGGGCAGCAGGCACCCTCAGG
GCTGGAGCGAACGCAAGCAAGTATTCATCATATCCTGTGAGGTGGAAGAT
GCAAACGGACCTCGCTTTATTTAGCCCCGATTCCTGGGGTTTTCATACGA
TGCATGTTGGTTTTTGGCGGTTTGTTCAGGCGCAGTCGAGTAGAGCAACC
TCGGTAACCGCAGAGAGCATTTTGTACAGGGCAGCAGGCACCCTCAGGGC
TGGAGCGAACGCAAGCAAGTATTCATCATATCCTGTGAGGTGGAAGCACT
TAATAAGTGACTCTCTGTGTCAGCAGAAATTGATGGAGATGCAACTCCTG
CTCGAGGCGTTGTTTGCGAAGAATGCACACTTAATAAGTGACTCTCTGTG
TCAGCAGAAATTGATGGAGATGCAACTCCTGCTCGAGGCGTTGTTTGCGA
AGAATGCA back to top
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