mRNA_P-canaliculata_contig100749.149.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig100749.149.1
Unique NamemRNA_P-canaliculata_contig100749.149.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: UPI001A548729 (Uncharacterized protein n=1 Tax=Verrucomicrobiaceae bacterium R5-34 TaxID=2800420 RepID=UPI001A548729)

HSP 1 Score: 263 bits (673), Expect = 8.560e-82
Identity = 139/335 (41.49%), Postives = 204/335 (60.90%), Query Frame = 1
Query:    7 DLAFPEGEVSGPITTGD-SNYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKGSRLLRQAHY-YVMGGAWDFNRYLSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARYL-EAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANF-------DREAAPAFANLADELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGTYAGVPEIEDIAKALKHPTA 981
            D   P GE SGPI  G+ SNY++YVP +LRKDR  PL+ +T A GGK +   ++  GAE+ GWIIA+ VES+NG   PEGN+ H + C++ L+  LPID++R+YF+GDSGGG MA  N  R++ AG MP +AY  + +   ++ HY Y +GGA DFNRY +A+  A+ G+ G HRF K GH         + ++WLN  +L + ++  +   +++DF  +L++W++++ ++ PHRAYYW +F       + + A     L   L KDP + +Y EGL+ALD FS D   T  +   SL +     +N+  +KL   Y GVP IE I+  L  P A
Sbjct:   96 DFPHPVGEASGPIEAGNGSNYYIYVPKTLRKDRPVPLMIYTSAGGGKERVVNRYKLGAELNGWIIASPVESKNGPSHPEGNYKHSKQCFEHLIATLPIDQERIYFSGDSGGGAMAFYNAMRIQSAGIMPFVAYSPENN--YKKKHYCYSIGGASDFNRYSTARAAAQYGKRGIHRFVKGGHTNGPEEAGVEGMVWLNGMHLADTRKDSELDDDRLDFESTLINWIKELTEETPHRAYYWCDFLVNHYEIEGKNASLVGPLMKALEKDPNNARYVEGLEALDDFS-DKYFTSAQGASSLPR-----INKALEKLSEKYIGVPYIEMISLELAKPMA 422          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: UPI00167505DF (SHD1 domain-containing protein n=1 Tax=Roseibacillus persicicus TaxID=454148 RepID=UPI00167505DF)

HSP 1 Score: 246 bits (627), Expect = 3.920e-75
Identity = 138/332 (41.57%), Postives = 191/332 (57.53%), Query Frame = 1
Query:    7 DLAFPEGEVSGPITTGDSNYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAY-LLKGSRLLRQAHYYVMGGAWDFNRYLSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARYLEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANF---DREAAPAFANLAD----ELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGTYAGVPEIEDIAKALKHPT 978
            +L  P G   GPI   +S+YF+Y+P SL   R+APLLFFTG+ GG  K   ++I+ AE+ GWI+A S E+ N     + +  HV AC   L   LP+D  R+YF G SGGG  A++N    KGAGA+P I + +L G  +  + HYY +GGA D+NRY +A  R   G N FHRF+  GH         D +LWLNAR+  + +  ++A +  DF R+LLD+L  + D   HRA+   +F   D E + A  + AD    +L  +P +  Y E L  LD  S   L+  G   G+LKKHTS+KV+REA +L   Y G+ EI  I + L+ PT
Sbjct:   80 NLPHPLGRAVGPIKAENSHYFLYLPKSLVAGRRAPLLFFTGSGGGNLKMLDRYIQAAEVGGWIVAVSKETRNN----QNSLPHVLACMKHLETTLPVDSNRLYFTGASGGGQRAMMNAAGYKGAGAIPIIYHGILDGEEVPSKGHYYFIGGAQDYNRYGTAAARKNLGRNAFHRFHPGGHNNGPDTLVQDGMLWLNARFYASTKDREYAEQASDFERNLLDFLEGLPDGASHRAFMLLSFIRDDYEISSANQSRADALFSKLQSNPQNALYLEALADLDELSEKDLSEHG--VGTLKKHTSKKVSREAARLRDKYPGLHEIPSILENLQKPT 405          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A858RG89_9BACT (Uncharacterized protein n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RG89_9BACT)

HSP 1 Score: 236 bits (601), Expect = 3.910e-71
Identity = 125/331 (37.76%), Postives = 186/331 (56.19%), Query Frame = 1
Query:    1 ATDLAFPEGEVSGPITTGDSNYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKGSRLLRQAHYYVMGGAWDFNRYLSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARYLEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANFDREAAPAFANLAD-----ELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGTYAGVPEIEDIAKALKHPT 978
            A DL  P+GE SGPI  G S YFVY+P SL+  RK PLLF+T + GG   +     EGAEI GW++A SVES+N  D PE N  H + C + L   LP+D+KR+YF G+SGG  MA  N  +L GAG +  IA   K   L +  HY+ + GA+D+NRY ++   +E   +   RF+  GH         + ++WL  +Y   +++ +    + D+  ++LDW+ K+K  + +RA +WA F RE+    AN +      +L  +P +  YA+GL  L+ F+   L+T  +      +HTSE++ REA  L  T+   P ++DI + L   T
Sbjct:   86 APDLGHPQGETSGPIDAGGSKYFVYLPKSLKGGRKYPLLFYTASGGGSKDTLNALTEGAEICGWVVACSVESKNETD-PEKNHEHAKKCVEHLKKTLPLDEKRIYFGGNSGGARMAFTNASKLDGAGVLAQIAGA-KPDELKKGNHYFFISGAYDYNRYGTSASYSEVARSAALRFHPGGHDNGPDWLVTEGLVWLEGQY--QRKAKEETPARADYEAAVLDWIAKLKTTEDYRAAWWAGFLRESGVMAANESALGAYADLTAEPANAAYADGLSKLEEFAAMTLSTGPQSAPDCFEHTSEEIQREAKALQETFGNTPRVKDIIEGLLKKT 412          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A4P6PB55_9BACT (SHD1 domain-containing protein n=1 Tax=Verrucomicrobia bacterium S94 TaxID=2488809 RepID=A0A4P6PB55_9BACT)

HSP 1 Score: 230 bits (586), Expect = 9.600e-69
Identity = 137/334 (41.02%), Postives = 191/334 (57.19%), Query Frame = 1
Query:    7 DLAFPEGEVSGPITT-GDSNYFVYVPTSLRKDRKAPLLFFTGATGGK-AKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKGSRLLRQAHYYVMGGAWDFNRYLSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARYLEAQESGDFAA-EKMDFNRSLLDWLRKIKDKQPHRAYYWANFDRE---AAPAFANLAD----ELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGTYAGVPEIEDIAKALKHPT 978
            DL + +GEV GPI     S+Y++Y+P SL   RKAPLLF+T ++  + A+   + I  AEI GW++A SVES N N     N        D +++ LP+DKKR+YF G+SGGG M ++N   ++  G MPN+ YL   S    +   +V+ G  D+NRY SA +R + G+   HRF+  GHG A      D +LWL  RYL   E GD AA E+ D+  +L  W+     ++PHRAYYWA F ++    +PA     D    ELG+ P +  Y EGL  +D+ S + L+  G  QGSL  H++  V  E +KL+  Y GVP IED  KA+  PT
Sbjct:   93 DLPYKQGEVVGPIRAKSSSHYYLYLPESLTSTRKAPLLFYTHSSRPQDARLIEELITAAEINGWVMALSVESCNDNG-TSANLDTANKAVDHILDTLPVDKKRLYFTGNSGGGAMCMINGADMRACGLMPNVGYL-PSSAGKPKCDVFVINGGTDYNRYTSADMRKKIGKTAVHRFHGGGHGKAPAWLFQDGMLWLEGRYLA--EKGDKAAGERDDYIEALTAWINANTIREPHRAYYWAVFMKKQLNCSPAQNAALDAVISELGQAPENALYVEGLADIDNLSLNKLSKYG--QGSLYDHSNGAVESECEKLLRKYEGVPVIEDALKAIGSPT 420          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: UPI001A4C982F (Uncharacterized protein n=1 Tax=Verrucomicrobiaceae bacterium R5-34 TaxID=2800420 RepID=UPI001A4C982F)

HSP 1 Score: 197 bits (501), Expect = 4.110e-56
Identity = 129/342 (37.72%), Postives = 177/342 (51.75%), Query Frame = 1
Query:    1 ATDLAFPEGEVSGPITTGD-SNYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEG----AEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKGSRLLRQAHYYVMGGAWDFNRYLSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARYLEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANFDREA-------APAFANLADELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGTYAGVPEIEDIAKALKHPTATLQ 990
            A  LA+P G++ GP+  G  ++YFVY+P SL++DR APL+FF    G K      FI+G    A+  GW++A SV S N +   + N    +   D L   LP+D+KRV++AG SGGG  + +N       G MP+  Y+L G +  R    Y +GG +DFNRY +A   A   +NGFHR +  GH  A+     D + W+  RYL  Q+S +   E  DF R+ L WL+++++    RAY  A   RE          A   L  EL K P +  Y E L ALD FS   LA  G   GS       KV R  +KL  +Y  +PEI  I  AL   T +L+
Sbjct:   95 AEGLAYPLGQMQGPVDAGGGASYFVYLPKSLKQDRPAPLIFFCAPWGAKKPG---FIKGMTDVADRFGWVVALSVNSSNAHSMKK-NSDFCKKSLDHLFGTLPLDEKRVHYAGHSGGGAQSYVNASFRPAYGVMPSAGYVLYGVKP-RAEVVYAIGGGYDFNRYTTANAVAGFKKNGFHRISPKGHPRAANSYREDGVFWMACRYLGEQKS-EHLEEAKDFERAALIWLKELQESHSMRAYSNAVVFREYYQPEGHNGRALELLIKELEKTPDNKLYHEALHALDEFSDKYLA--GSVVGSAMNRVDPKVARGTEKLRESYGHIPEIAAILDALNKKTDSLK 428          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A851GMS7_9BACT (SHD1 domain-containing protein n=1 Tax=Oceaniferula marina TaxID=2748318 RepID=A0A851GMS7_9BACT)

HSP 1 Score: 127 bits (320), Expect = 6.530e-30
Identity = 98/313 (31.31%), Postives = 148/313 (47.28%), Query Frame = 1
Query:    1 ATDLAFPEGEVSGPITT-GDSNYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKGSRLLRQAHYYVMGGAWDFNRY-LSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARYLEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANFDREAA---PAFANLADELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGT 924
            A DL +P G+ +  I   GD +YF+Y+P SL K +K P+L+     GG   + ++++ GAE  GWI+A S +S+NG  F + + A +    D +   LPIDK+RVY  G SGG  MA L   R K    +  IA    G    R+   Y + G+  FNR  ++   +  + +    R+    H  A+     DAI  LN  +L   +S D+A +   +  +L + +   ++  P RAY WA+F  E     P      D+LG D ++  Y EGL  +  F+          Q       S    RE+ K  GT
Sbjct:   98 ADDLPYPLGKTTAEIPCDGDFSYFLYLPKSLVKGKKYPVLYIMSPGGGGGGTAKRYVAGAERNGWILAVSKQSKNG--FNKSSDA-ITNMMDHVQASLPIDKERVYVTGFSGGSRMAYLISQRRKEVTGV--IACGAGGKIGSRKQVVYGLCGSNCFNRTDMANAFKGVSHKGAVLRYFPGRHAWANGELCEDAITHLNGVFLSDNKS-DYAEDYERYRHALGELIEGSRENNPLRAYMWADFAHEYDFDDPRAKKAYDDLGSDEMNKLYVEGLAGIRKFAEKTFGQISASQWKADPKVSSACERESRKYEGT 404          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A6B3L0V8_9BACT (Uncharacterized protein n=1 Tax=Sulfuriroseicoccus oceanibius TaxID=2707525 RepID=A0A6B3L0V8_9BACT)

HSP 1 Score: 104 bits (260), Expect = 1.610e-21
Identity = 84/319 (26.33%), Postives = 144/319 (45.14%), Query Frame = 1
Query:    7 DLAFPEGEVSGPITTGDS-NYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIA--YLLKGSRLLRQAHYYVMG--GAWDFNRYLSAQIRAE-AGENGFHRFNKNGHGGASVVQSNDAILWLNARYLEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANF--DREAAPA-----FANLADELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREADKLIGT 924
            +L +P G+++  I T +     +Y+PTSLR D   P+LF      G+  +  ++ + AE+  WI+A + +S N  D+ + ++  + A  + +   LPID+KR+Y +G SGG   +     +   AG +   A     K    +   H    G  G   FNRY  ++  A+    +   RF    H  A      DA++ LN  + E Q    +  ++  F   +L  +    + +PHRAY    F  DR          FA L  +L K+P + ++ +GL  +D  ++ +  +E     +L     E   + A+K  GT
Sbjct:   99 ELKYPLGKITDEIPTANGYTCRLYLPTSLRDDDAHPVLFIQDPGSGRVGTLNRYKKAAEMNRWILATTPQSSNKLDY-DASYKAIVAMMEFVKENLPIDEKRIYLSGFSGGSRYSFFTASQNDVAGIIACGAGSSCHKHGERVPDNHVVTYGLCGTNCFNRYDMSRSHAKMTNPDSVLRFFVGNHDWAGGALLEDAMVHLNGVFFE-QNGEAYPQQQARFEVDVLSVIESCLEAEPHRAYMLTQFMIDRGLTSGTRTTRFARLMRKLSKNPENQRFVDGLADMDKMAKKVCGSEYRSYKTLYPEVVEAGEKYAEKYAGT 415          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A4P6PLW2_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium S94 TaxID=2488809 RepID=A0A4P6PLW2_9BACT)

HSP 1 Score: 102 bits (253), Expect = 2.560e-21
Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 1
Query:   13 AFPEGEVSGPITTGD-SNYFVYVPTSLRKDRKAPLLFFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKG-SRL 423
            A+  GE+ GP+   D S++++YVP SL   R APL+ +TG TGGK  + R+ I GAE+ GWI+A +VE +  N   + N    ++    L+N  P+D++R+YFAG S G  ++  N +  K  G +P   Y+ +G SRL
Sbjct:   91 AYRRGEILGPLEAIDGSSFYLYVPKSLADIRSAPLMLYTGPTGGKLLNIRELINGAEVTGWIVAVAVEPDYYNSV-DVNRKICDSMVQTLLNTAPVDRRRLYFAGFSAGASVSYYNQNTWKACGLIPMSTYIPQGWSRL 228          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A7X7VES1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X7VES1_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 1.290e-8
Identity = 86/292 (29.45%), Postives = 126/292 (43.15%), Query Frame = 1
Query:   61 NYFVYVPTSLRKDRKAPLL--FFTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMALLNCDRLKG---AGAMPNIAYLLKGSR--LLRQAHYYVMGGAWDFNR-YLSAQIRAEAGENGFHRFN--KNGHGGASVVQSNDAILWLNARYLEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANFDREAAPAFANLADELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNREA 906
            +Y +Y+P +    R+ P+L  F  GA G  A     F E AE+ GW++AAS +S NG    E   A  +A + DL  +LP+D++RVY +G SGG  +A +   R+ G   AG +   A L  G     L  A Y+ + G  DFN   ++A  RA       HRF      H          A+ W+    +EA + G    ++      L   L +    +     +WA    E   A A LA+ LG   V       L AL   +  + A EG  + +       K +R A
Sbjct:   57 SYALYLPAAFEGSRRWPVLVLFDPGARGPLAVEA--FREAAEVHGWVLAASNDSRNG-PLRESVLA-AQALWKDLRERLPVDERRVYASGFSGGSRVASV-FPRVAGLTLAGVIGCGAGLAGGIEPASLGAAAYFGLAGLRDFNYPEMTALDRAFDPSGLPHRFFYFDGSHAWPDAGACARAVGWME---IEAMKRGLRPVDREKAGAFLRRELDEADAFEAAGCVFWA---AERLAAAARLAEGLGLGDV-------LPALAGLAGRVAALEGSKEYARFVEAERKRDRRA 330          
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Match: A0A317HXK3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A317HXK3_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.950e-7
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 1
Query:   13 AFPEGEVSGPITTG---DSNYFVYVPTSLRKDRKAPLLF-FTGATGGKAKSCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPIDKKRVYFAGDSGGGVMAL 351
            A P G V+  I T    D +Y VY+P++    +K P +F F     GK    R F   AE  G+I+  S  S NG D  +     V A +DD+ ++ PID++R YFAG SGG  +++
Sbjct:   30 AIPVGAVTEKIVTQSEPDQSYAVYLPSNYSPAQKWPTIFCFDPGARGKLAVGR-FKSAAEKFGYIVVCSNNSRNGLD-TDVVTKIVNAFWDDVHHRFPIDEQRTYFAGFSGGARLSI 144          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100749.149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
UPI001A5487298.560e-8241.49Uncharacterized protein n=1 Tax=Verrucomicrobiacea... [more]
UPI00167505DF3.920e-7541.57SHD1 domain-containing protein n=1 Tax=Roseibacill... [more]
A0A858RG89_9BACT3.910e-7137.76Uncharacterized protein n=1 Tax=Luteolibacter lute... [more]
A0A4P6PB55_9BACT9.600e-6941.02SHD1 domain-containing protein n=1 Tax=Verrucomicr... [more]
UPI001A4C982F4.110e-5637.72Uncharacterized protein n=1 Tax=Verrucomicrobiacea... [more]
A0A851GMS7_9BACT6.530e-3031.31SHD1 domain-containing protein n=1 Tax=Oceaniferul... [more]
A0A6B3L0V8_9BACT1.610e-2126.33Uncharacterized protein n=1 Tax=Sulfuriroseicoccus... [more]
A0A4P6PLW2_9BACT2.560e-2139.57Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A7X7VES1_9BACT1.290e-829.45Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A317HXK3_9BACT1.950e-736.75Uncharacterized protein (Fragment) n=1 Tax=Blastoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100749contigP-canaliculata_contig100749:17..1021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score63.2
Seed ortholog evalue2.7e-07
Seed eggNOG ortholog240016.ABIZ01000001_gene5477
KEGG koko:K06999
EggNOG free text desc.palmitoyl-(protein) hydrolase activity
EggNOG OGsCOG0400@1,COG0400@2
COG Functional cat.S
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons1
Model size1005
Cds size1005
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.303441-CDS-P-canaliculata_contig100749:16..10211622815581.303441-CDS-P-canaliculata_contig100749:16..1021Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100749 17..1021 -
1693494149.2446663-CDS-P-canaliculata_contig100749:16..10211693494149.2446663-CDS-P-canaliculata_contig100749:16..1021Pelvetia canaliculata dioeciousCDSP-canaliculata_contig100749 17..1021 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100749.149.1prot_P-canaliculata_contig100749.149.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig100749 17..1021 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig100749.149.1

>prot_P-canaliculata_contig100749.149.1 ID=prot_P-canaliculata_contig100749.149.1|Name=mRNA_P-canaliculata_contig100749.149.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=335bp
ATDLAFPEGEVSGPITTGDSNYFVYVPTSLRKDRKAPLLFFTGATGGKAK
SCRQFIEGAEIAGWIIAASVESENGNDFPEGNFAHVEACYDDLMNKLPID
KKRVYFAGDSGGGVMALLNCDRLKGAGAMPNIAYLLKGSRLLRQAHYYVM
GGAWDFNRYLSAQIRAEAGENGFHRFNKNGHGGASVVQSNDAILWLNARY
LEAQESGDFAAEKMDFNRSLLDWLRKIKDKQPHRAYYWANFDREAAPAFA
NLADELGKDPVSVKYAEGLDALDSFSRDILATEGEDQGSLKKHTSEKVNR
EADKLIGTYAGVPEIEDIAKALKHPTATLQTKKR*
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mRNA from alignment at P-canaliculata_contig100749:17..1021-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig100749.149.1 ID=mRNA_P-canaliculata_contig100749.149.1|Name=mRNA_P-canaliculata_contig100749.149.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1005bp|location=Sequence derived from alignment at P-canaliculata_contig100749:17..1021- (Pelvetia canaliculata dioecious)
GCCACCGATCTGGCGTTCCCCGAAGGGGAAGTTTCCGGCCCTATCACCAC TGGCGATTCGAACTACTTCGTCTACGTGCCGACATCTCTCCGGAAAGACA GAAAAGCGCCCCTGCTCTTTTTCACAGGAGCAACCGGCGGCAAGGCAAAG TCCTGCCGGCAATTCATCGAGGGTGCGGAAATCGCCGGCTGGATCATCGC CGCCAGTGTCGAGTCAGAGAACGGAAACGATTTTCCCGAGGGCAACTTCG CGCATGTGGAGGCCTGTTACGACGACCTCATGAACAAGCTGCCAATTGAC AAAAAACGCGTTTACTTCGCCGGAGACTCCGGGGGTGGTGTTATGGCCCT TTTGAACTGCGACCGTTTGAAAGGCGCGGGTGCCATGCCGAACATCGCTT ATCTGCTGAAGGGCTCGAGACTACTGAGACAGGCTCACTATTACGTCATG GGCGGAGCCTGGGACTTCAATCGGTATCTCTCAGCACAGATAAGAGCGGA GGCGGGTGAGAACGGCTTTCACAGGTTCAACAAAAACGGTCACGGAGGAG CTTCGGTAGTACAGAGCAACGACGCGATACTTTGGTTGAATGCTCGCTAC CTTGAAGCACAGGAATCCGGTGACTTTGCAGCGGAAAAGATGGATTTCAA CCGGTCTCTGCTGGACTGGTTGAGAAAAATCAAGGATAAACAGCCTCACC GTGCCTACTACTGGGCGAACTTCGACCGTGAGGCCGCTCCTGCTTTTGCA AACTTAGCGGATGAACTCGGGAAAGACCCTGTAAGCGTGAAGTATGCCGA GGGGCTGGACGCACTGGACAGCTTTAGCCGGGACATTCTCGCGACCGAGG GCGAGGATCAGGGAAGTTTGAAGAAACACACCAGTGAAAAGGTGAACCGT GAGGCCGACAAACTCATCGGGACGTATGCCGGTGTTCCGGAAATAGAAGA CATCGCGAAAGCCTTAAAACACCCGACGGCTACATTGCAAACGAAGAAAA GGTAG
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Coding sequence (CDS) from alignment at P-canaliculata_contig100749:17..1021-

>mRNA_P-canaliculata_contig100749.149.1 ID=mRNA_P-canaliculata_contig100749.149.1|Name=mRNA_P-canaliculata_contig100749.149.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2010bp|location=Sequence derived from alignment at P-canaliculata_contig100749:17..1021- (Pelvetia canaliculata dioecious)
GCCACCGATCTGGCGTTCCCCGAAGGGGAAGTTTCCGGCCCTATCACCAC
TGGCGATTCGAACTACTTCGTCTACGTGCCGACATCTCTCCGGAAAGACA
GAAAAGCGCCCCTGCTCTTTTTCACAGGAGCAACCGGCGGCAAGGCAAAG
TCCTGCCGGCAATTCATCGAGGGTGCGGAAATCGCCGGCTGGATCATCGC
CGCCAGTGTCGAGTCAGAGAACGGAAACGATTTTCCCGAGGGCAACTTCG
CGCATGTGGAGGCCTGTTACGACGACCTCATGAACAAGCTGCCAATTGAC
AAAAAACGCGTTTACTTCGCCGGAGACTCCGGGGGTGGTGTTATGGCCCT
TTTGAACTGCGACCGTTTGAAAGGCGCGGGTGCCATGCCGAACATCGCTT
ATCTGCTGAAGGGCTCGAGACTACTGAGACAGGCTCACTATTACGTCATG
GGCGGAGCCTGGGACTTCAATCGGTATCTCTCAGCACAGATAAGAGCGGA
GGCGGGTGAGAACGGCTTTCACAGGTTCAACAAAAACGGTCACGGAGGAG
CTTCGGTAGTACAGAGCAACGACGCGATACTTTGGTTGAATGCTCGCTAC
CTTGAAGCACAGGAATCCGGTGACTTTGCAGCGGAAAAGATGGATTTCAA
CCGGTCTCTGCTGGACTGGTTGAGAAAAATCAAGGATAAACAGCCTCACC
GTGCCTACTACTGGGCGAACTTCGACCGTGAGGCCGCTCCTGCTTTTGCA
AACTTAGCGGATGAACTCGGGAAAGACCCTGTAAGCGTGAAGTATGCCGA
GGGGCTGGACGCACTGGACAGCTTTAGCCGGGACATTCTCGCGACCGAGG
GCGAGGATCAGGGAAGTTTGAAGAAACACACCAGTGAAAAGGTGAACCGT
GAGGCCGACAAACTCATCGGGACGTATGCCGGTGTTCCGGAAATAGAAGA
CATCGCGAAAGCCTTAAAACACCCGACGGCTACATTGCAAACGAAGAAAA
GGTAGGCCACCGATCTGGCGTTCCCCGAAGGGGAAGTTTCCGGCCCTATC
ACCACTGGCGATTCGAACTACTTCGTCTACGTGCCGACATCTCTCCGGAA
AGACAGAAAAGCGCCCCTGCTCTTTTTCACAGGAGCAACCGGCGGCAAGG
CAAAGTCCTGCCGGCAATTCATCGAGGGTGCGGAAATCGCCGGCTGGATC
ATCGCCGCCAGTGTCGAGTCAGAGAACGGAAACGATTTTCCCGAGGGCAA
CTTCGCGCATGTGGAGGCCTGTTACGACGACCTCATGAACAAGCTGCCAA
TTGACAAAAAACGCGTTTACTTCGCCGGAGACTCCGGGGGTGGTGTTATG
GCCCTTTTGAACTGCGACCGTTTGAAAGGCGCGGGTGCCATGCCGAACAT
CGCTTATCTGCTGAAGGGCTCGAGACTACTGAGACAGGCTCACTATTACG
TCATGGGCGGAGCCTGGGACTTCAATCGGTATCTCTCAGCACAGATAAGA
GCGGAGGCGGGTGAGAACGGCTTTCACAGGTTCAACAAAAACGGTCACGG
AGGAGCTTCGGTAGTACAGAGCAACGACGCGATACTTTGGTTGAATGCTC
GCTACCTTGAAGCACAGGAATCCGGTGACTTTGCAGCGGAAAAGATGGAT
TTCAACCGGTCTCTGCTGGACTGGTTGAGAAAAATCAAGGATAAACAGCC
TCACCGTGCCTACTACTGGGCGAACTTCGACCGTGAGGCCGCTCCTGCTT
TTGCAAACTTAGCGGATGAACTCGGGAAAGACCCTGTAAGCGTGAAGTAT
GCCGAGGGGCTGGACGCACTGGACAGCTTTAGCCGGGACATTCTCGCGAC
CGAGGGCGAGGATCAGGGAAGTTTGAAGAAACACACCAGTGAAAAGGTGA
ACCGTGAGGCCGACAAACTCATCGGGACGTATGCCGGTGTTCCGGAAATA
GAAGACATCGCGAAAGCCTTAAAACACCCGACGGCTACATTGCAAACGAA
GAAAAGGTAG
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